Nucleotide Global Alignment

Description

• Query: ccsbBroad304_00650
• Subject: NM_008139.5
• Aligned Length: 1085
• Identities: 874
• Gaps: 16

Alignment

Query    1  ATGACTCTGGAGTCCATGATGGCGTGTTGCCTGAGCGATGAGGTGAAGGAGTCCAAGCGGATCAACGCCGAGAT  74
            |||||||||||||||||.||||||||.|||||||||||.||||..|||||..||..|.|||||||||.||||||
Sbjct    1  ATGACTCTGGAGTCCATCATGGCGTGCTGCCTGAGCGAGGAGGCCAAGGAAGCCCGGAGGATCAACGACGAGAT  74

Query   75  CGAGAAGCAGCTGCGGCGGGACAAGCGCGACGCCCGGCGCGAGCTCAAGCTGCTGCTGCTCGGCACGGGCGAGA  148
            ||||..|||||||||..|||||||||||||||||||.||.||||||||||||||||||||.||.||.||.||||
Sbjct   75  CGAGCGGCAGCTGCGCAGGGACAAGCGCGACGCCCGCCGGGAGCTCAAGCTGCTGCTGCTGGGGACAGGGGAGA  148

Query  149  GCGGGAAGAGCACGTTCATCAAGCAGATGCGCATCATCCACGGCGCCGGCTACTCGGAGGAGGACAAGCGCGGC  222
            |.||.||||||||.|||||||||||||||.|.|||||||||||..|.||||||||.||.||.||||||||||||
Sbjct  149  GTGGCAAGAGCACCTTCATCAAGCAGATGAGGATCATCCACGGGTCGGGCTACTCTGACGAAGACAAGCGCGGC  222

Query  223  TTCACCAAGCTCGTCTACCAGAACATCTTCACCGCCATGCAGGCCATGATCCGGGCCATGGAGACGCTCAAGAT  296
            |||||||||||.||.||.||||||||||||||.||||||||||||||||||.|.||.|||||.|||||||||||
Sbjct  223  TTCACCAAGCTGGTGTATCAGAACATCTTCACGGCCATGCAGGCCATGATCAGAGCGATGGACACGCTCAAGAT  296

Query  297  CCTCTACAAGTACGAGCAGAACAAGGCCAATGCGCTCCTGATCCGGGAGGTGGACGTGGAGAAGGTGACCACCT  370
            ||..||||||||.||.||.||.|||||..||||.|...||.|.||.|||||.||.||||||||||||.|..|.|
Sbjct  297  CCCATACAAGTATGAACACAATAAGGCTCATGCACAATTGGTTCGAGAGGTTGATGTGGAGAAGGTGTCTGCTT  370

Query  371  TCGAGCATCAGTACGTCAG-TGCCATCAAGACCCTGTGGGAGGACCCGGGCATCCAGGAATGCTACGACCGCAG  443
            |.|||.|||..||.|| || |||.||.||||.|.|||||.|.||.||.||.||||||||.|||||||||.|..|
Sbjct  371  TTGAGAATCCATATGT-AGATGCAATAAAGAGCTTGTGGAATGATCCTGGAATCCAGGAGTGCTACGACAGACG  443

Query  444  GCGCGAGTACCAGCTCTCCGACTCTGCCAAGTACTACCTGACCGACGTTGACCGCATCGCC--ACCTTGGGCTA  515
            .||.||.||.|||.|.||.||||||.||||.|||||.||||..|||.|.|||||..|.|||  .||||  .|||
Sbjct  444  ACGGGAATATCAGTTATCTGACTCTACCAAATACTATCTGAATGACTTGGACCGTGTAGCCGACCCTT--CCTA  515

Query  516  CCTGCCCACCCAGCAGGACGTGCTGCGGGTCCGCGTGCCCACCACCGGCATCATCGAGTACCCTTTCGACCTGG  589
            .|||||.||.||.||.||||||||..|.||.||.||.|||||.||.||.||||||||.|||||.||.|||.|  
Sbjct  516  TCTGCCTACACAACAAGACGTGCTTAGAGTTCGAGTCCCCACTACAGGGATCATCGAATACCCCTTTGACTT--  587

Query  590  AGAACA-----TCATCTTCCGGATGGTGGATGTGGGGGGCCAGCGGTCGGAGCGGAGGAAGTGGATCCACTGCT  658
               |||     ||||.|||.|.|||||.|||||.||||||||..||||.|||.|.||.||.|||||.|||||||
Sbjct  588  ---ACAAAGTGTCATTTTCAGAATGGTCGATGTAGGGGGCCAAAGGTCAGAGAGAAGAAAATGGATACACTGCT  658

Query  659  TTGAGAACGTGACATCCATCATGTTTCTCGTCGCCCTCAGCGAATACGACCAAGTCCTGGTGGAGTCGGACAAC  732
            ||||.||.||.||.||||||||||||||.||.||.||.||||||||.||.|||||.||.||||||||.|||||.
Sbjct  659  TTGAAAATGTCACCTCCATCATGTTTCTAGTAGCGCTTAGCGAATATGATCAAGTTCTTGTGGAGTCAGACAAT  732

Query  733  GAGAACCGGATGGAGGAGAGCAAAGCCCTGTTCCGGACCATCATCACCTACCCCTGGTTCCAGAACTCCTCCGT  806
            ||||||||.|||||||||||||||||.||.||..|.||.||.|||||||||||||||||||||||||||||.||
Sbjct  733  GAGAACCGCATGGAGGAGAGCAAAGCACTCTTTAGAACAATTATCACCTACCCCTGGTTCCAGAACTCCTCTGT  806

Query  807  CATCCTCTTCCTCAACAAGAAGGACCTGCTGGAGGACAAGATCCTGTACTCGCACCTGGTGGACTACTTCCCCG  880
            .||.||.|||.|.||||||||.||.||.||.|||||.||.|||.||||.||.|||||.||.|||||||||||.|
Sbjct  807  GATTCTGTTCTTAAACAAGAAAGATCTTCTAGAGGAGAAAATCATGTATTCCCACCTAGTCGACTACTTCCCAG  880

Query  881  AGTTCGATGGTCCCCAGCGGGACGCCCAGGCGGCGCGGGAGTTCATCCTGAAGATGTTCGTGGACCTGAACCCC  954
            |.|..|||||.||||||.|.||.||||||||.||.||.||.|||||||||||.|||||||||||||||||||||
Sbjct  881  AATATGATGGACCCCAGAGAGATGCCCAGGCAGCTCGAGAATTCATCCTGAAAATGTTCGTGGACCTGAACCCC  954

Query  955  GACAGCGACAAGATCATCTACTCACACTTCACGTGTGCCACCGACACGGAGAACATCCGCTTCGTGTTCGCGGC  1028
            |||||.|||||.|||||||||||.|||||||||||.|||||.||.||.|||||||||||||||||.||.||.||
Sbjct  955  GACAGTGACAAAATCATCTACTCCCACTTCACGTGCGCCACAGATACCGAGAACATCCGCTTCGTCTTTGCAGC  1028

Query 1029  CGTGAAGGACACCATCCTGCAGCTCAACCTCAAGGAGTACAACCTGGTC  1077
            |||.||||||||||||||||||||.|||||.|||||||||||.||||||
Sbjct 1029  CGTCAAGGACACCATCCTGCAGCTGAACCTGAAGGAGTACAATCTGGTC  1077