Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_00651
- Subject:
- NM_001256414.2
- Aligned Length:
- 1063
- Identities:
- 727
- Gaps:
- 158
Alignment
Query 1 ATGGGCTGCACGTTGAGCGCCGAAGACAAGGCGGCAGTGGAGCGAAGCAAGATGATCGACCGCAACTTACGGGA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GGACGGGGAAAAAGCGGCCAAAGAAGTGAAGCTGCTGCTACTCGGTGCTGGAGAATCTGGTAAAAGCACCATTG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TGAAACAGATGAAAATCATTCATGAGGATGGCTATTCAGAGGATGAATGTAAACAATATAAAGTAGTTGTCTAC 222
||||||||.||.|||||.|.|||.||||||||.||.||.|||||||||||.||||.|||.||||||
Sbjct 1 --------ATGAAAATTATCCATGAAGCTGGTTATTCAGAAGAGGAGTGTAAACAATACAAAGCAGTGGTCTAC 66
Query 223 AGCAATACTATACAGTCCATCATTGCAATCATAAGAGCCATGGGACGGCTAAAGATTGACTTTGGGGAAGCTGC 296
||.||.||.||.|||||.||.|||||.|||||.||.||.|||||..||.|.|||||.||||||||.||..|.||
Sbjct 67 AGTAACACCATCCAGTCAATTATTGCTATCATTAGGGCTATGGGGAGGTTGAAGATAGACTTTGGTGACTCAGC 140
Query 297 CAGGGCAGATGATGCCCGGCAATTATTTGTTTTAGCTGGCAG-TGCTGAAGAAGGAGTCATGACTCCAGAACTA 369
|.||||.||||||||.||.|||.|.|||||..||||||| || ||||||||||||..|.||||||.|||||||.
Sbjct 141 CCGGGCGGATGATGCACGCCAACTCTTTGTGCTAGCTGG-AGCTGCTGAAGAAGGCTTTATGACTGCAGAACTT 213
Query 370 GCAGGAGTGATTAAACGGTTATGGCGAGATGGTGGGGTACAAGCTTGCTTCAGCAGATCCAGGGAATATCAGCT 443
||.|||||.||.||..|.||.|||..||||.||||.||||||||.||.||||.|||||||.|.||.||.|||||
Sbjct 214 GCTGGAGTTATAAAGAGATTGTGGAAAGATAGTGGTGTACAAGCCTGTTTCAACAGATCCCGAGAGTACCAGCT 287
Query 444 CAATGATTCTGCTTCATATTATCTAAATGATCTGGATAGAATATCCCAGTCTAACTACATTCCAACTCAGCAAG 517
.|||||||||||..||||.|||.|.|||||..||||.||||||.|.||..|.||.|||||.||.|||||.||||
Sbjct 288 TAATGATTCTGCAGCATACTATTTGAATGACTTGGACAGAATAGCTCAACCAAATTACATCCCGACTCAACAAG 361
Query 518 ATGTTCTTCGGACGAGAGTGAAGACCACAGGCATTGTAGAAACACATTTCACCTTCAAAGACCTATACTTCAAG 591
|||||||..|.||.||||||||.||.|||||.|||||.|||||.|||||.||.||||||||.||..|.||.||.
Sbjct 362 ATGTTCTCAGAACTAGAGTGAAAACTACAGGAATTGTTGAAACCCATTTTACTTTCAAAGATCTTCATTTTAAA 435
Query 592 ATGTTTGATGTAGGTGGCCAAAGATCAGAACGAAAAAAGTGGATTCACTGTTTTGAGGGAGTGACAGCAATTAT 665
|||||||||||.||.||.||.|||||.||.||.||.|||||||||||.||.||.||.||||||||.||.||.||
Sbjct 436 ATGTTTGATGTGGGAGGTCAGAGATCTGAGCGGAAGAAGTGGATTCATTGCTTCGAAGGAGTGACGGCGATCAT 509
Query 666 CTTCTGTGTGGCCCTCAGTGATTATGACCTTGTTCTGGCTGAGGACGAGGAGATGAACCGAATGCATGAAAGCA 739
|||||||||.||.||.|||||.||.|||||.|||||.|||||.||.||.||.||||||||||||||||||||||
Sbjct 510 CTTCTGTGTAGCACTGAGTGACTACGACCTGGTTCTAGCTGAAGATGAAGAAATGAACCGAATGCATGAAAGCA 583
Query 740 TGAAACTGTTTGACAGCATTTGTAATAACAAATGGTTTACAGAAACTTCAATCATTCTCTTCCTTAACAAGAAA 813
|||||.|||||||||||||.|||||.|||||.|||||||||||.||.||.||.||.||.||.||.||||||||.
Sbjct 584 TGAAATTGTTTGACAGCATATGTAACAACAAGTGGTTTACAGATACATCCATTATACTTTTTCTAAACAAGAAG 657
Query 814 GACCTTTTTGAGGAAAAAATAAAGAGGAGTCCGTTAACTATCTGTTATCCAGAATACACAGGTTCCAATACATA 887
||.||.|||||.||||||||.||.|.|||.||..|.|||||.||.|||||||||||..||||.||.||.|||||
Sbjct 658 GATCTCTTTGAAGAAAAAATCAAAAAGAGCCCTCTCACTATATGCTATCCAGAATATGCAGGATCAAACACATA 731
Query 888 TGAAGAGGCAGCTGCCTATATTCAATGCCAGTTTGAAGATCTGAACAGAAGAAAAGATACCAAGGAGATCTATA 961
|||||||||||||||.|||||||||||.|||||||||||.||.||.|.||||||.||.||.|||||.||.||.|
Sbjct 732 TGAAGAGGCAGCTGCATATATTCAATGTCAGTTTGAAGACCTCAATAAAAGAAAGGACACAAAGGAAATATACA 805
Query 962 CTCACTTCACCTGTGCCACAGACACGAAGAATGTGCAGTTTGTTTTTGATGCTGTTACAGATGTCATCATTAAA 1035
|.||||||||.|||||||||||.||.|||||||||||||||||||||||||||||.||||||||||||||.|||
Sbjct 806 CCCACTTCACATGTGCCACAGATACTAAGAATGTGCAGTTTGTTTTTGATGCTGTAACAGATGTCATCATAAAA 879
Query 1036 AACAACTTAAAGGAATGTGGACTTTAT 1062
||.||..||||.||.|||||.||.|.|
Sbjct 880 AATAATCTAAAAGATTGTGGTCTCTTT 906