Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_00735
- Subject:
- NM_030787.4
- Aligned Length:
- 1729
- Identities:
- 682
- Gaps:
- 941
Alignment
Query 1 ATGTGGCTCCTGGTCAGTGTAATTCTAATCTCACGGATATCCTCTGTTGGGGGAGAAGCAATGTTCTGTGATTT 74
||||.||||.|..||||||||||.|||||||||.||.|||||.|||||||||||||||.||...|.||||||||
Sbjct 1 ATGTTGCTCTTATTCAGTGTAATCCTAATCTCATGGGTATCCACTGTTGGGGGAGAAGGAACACTTTGTGATTT 74
Query 75 TCCAAAAATAAACCATGGAATTCTATATGATGAAGAAAAATATAAGCCATTTTCCCAAGTTCCTACAGGGGAAG 148
||||||||||.||||||||.||||.||||||||||||.|.|||||.||.|||||||||||||||||||||||||
Sbjct 75 TCCAAAAATACACCATGGATTTCTGTATGATGAAGAAGATTATAACCCTTTTTCCCAAGTTCCTACAGGGGAAG 148
Query 149 TTTTCTATTACTCCTGTGAATATAATTTTGTGTCTCCTTCAAAATCCTTTTGGACTCGCATAACGTGCGCAGAA 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||.|||||
Sbjct 149 TTTTCTATTACTCCTGTGAATATAATTTTGTGTCTCCTTCAAAATCCTTTTGGACTCGCATAACATGCACAGAA 222
Query 223 GAAGGATGGTCACCAACACCAAAGTGTCTCAGACTGTGTTTCTTTCCTTTTGTGGAAAATGGTCATTCTGAATC 296
||||||||||||||||||||.||||||||||||.||||||.|||||||||||||.|||||||||||||||||||
Sbjct 223 GAAGGATGGTCACCAACACCGAAGTGTCTCAGAATGTGTTCCTTTCCTTTTGTGAAAAATGGTCATTCTGAATC 296
Query 297 TTCAGGACAAACACATCTGGAAGGTGATACTGTACAAATTATTTGCAACACAGGATACAGACTTCAAAACAATG 370
||||||||.||.||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||
Sbjct 297 TTCAGGACTAATACATCTGGAAGGTGATACTGTACAAATTATTTGCAACACAGGATACAGCCTTCAAAACAATG 370
Query 371 AGAACAACATTTCATGTGTAGAACGGGGCTGGTCCACTCCTCCCAAATGCAGGTCCACT--------------- 429
||||.||||||||.|||||||||||||||||||||||||||||||.||||||.|.||||
Sbjct 371 AGAAAAACATTTCGTGTGTAGAACGGGGCTGGTCCACTCCTCCCATATGCAGCTTCACTAAAGGAGAATGTCAT 444
Query 430 ------ATTT---------------------------------------------------------------- 433
||||
Sbjct 445 GTTCCAATTTTAGAAGCCAATGTAGATGCTCAGCCAAAAAAAGAAAGCTACAAAGTTGGAGACGTGTTGAAATT 518
Query 434 ---CTGCAGAAAAA------------------------------------------------------------ 444
|||||||||||
Sbjct 519 CTCCTGCAGAAAAAATCTTATAAGAGTTGGATCAGACTCAGTTCAATGTTACCAATTTGGGTGGTCACCTAACT 592
Query 445 -------------------------------------------------------------------------- 444
Sbjct 593 TTCCAACATGCAAAGGACAAGTACGATCATGTGGTCCACCTCCTCAACTCTCCAATGGTGAAGTTAAGGAGATA 666
Query 445 -------------------------------------------------------------------------- 444
Sbjct 667 AGAAAAGAGGAATATGGACACAATGAAGTAGTGGAATATGATTGCAATCCTAATTTTATAATAAACGGGCCTAA 740
Query 445 -------------------------------------------------------------------------- 444
Sbjct 741 GAAAATACAATGTGTGGATGGAGAATGGACAACTTTACCCACTTGTGTTGAACAAGTGAAAACATGTGGATACA 814
Query 445 -------------------------------------------------------------------------- 444
Sbjct 815 TACCTGAACTCGAGTACGGTTATGTTCAGCCGTCTGTCCCTCCCTATCAACATGGAGTTTCAGTCGAGGTGAAT 888
Query 445 -------------------------------------------------------------------------- 444
Sbjct 889 TGCAGAAATGAATATGCAATGATTGGAAATAACATGATTACCTGTATTAATGGAATATGGACAGAGCTTCCTAT 962
Query 445 -------------------------------------------------------------------------- 444
Sbjct 963 GTGTGTTGCAACACACCAACTTAAGAGGTGCAAAATAGCAGGAGTTAATATAAAAACATTACTCAAGCTATCTG 1036
Query 445 -------------------------------------------------------------------------- 444
Sbjct 1037 GGAAAGAATTTAATCATAATTCTAGAATACGTTACAGATGTTCAGACATCTTCAGATACAGGCACTCAGTCTGT 1110
Query 445 -------------------------------------------------------------------------- 444
Sbjct 1111 ATAAACGGGAAATGGAATCCTGAAGTAGACTGCACAGAAAAAAGGGAACAATTCTGCCCACCGCCACCTCAGAT 1184
Query 445 -------------------------------------------------------------------------- 444
Sbjct 1185 ACCTAATGCTCAGAATATGACAACCACAGTGAATTATCAGGATGGAGAAAAAGTAGCTGTTCTCTGTAAAGAAA 1258
Query 445 -------------------------------------------------------------------------- 444
Sbjct 1259 ACTATCTACTTCCAGAAGCAAAAGAAATTGTATGTAAAGATGGACGATGGCAATCATTACCACGCTGTGTTGAG 1332
Query 445 ------------TGTGGGCCCCCTCCACCTATTGACAATGGAGACATTACTTCATTCCTGTTGTCAGTATATGC 506
|||||||||||||||.|||||.||||||||||.|..||.|||||||..||.|||||||||.|
Sbjct 1333 TCTACTGCATATTGTGGGCCCCCTCCATCTATTAACAATGGAGATACCACCTCATTCCCATTATCAGTATATCC 1406
Query 507 TCCAGGTTCATCAGTTGA-GTACCAGTGCCAGAACTTGTATCAACTTGAGG-----GTAACAATCAAATAACAT 574
||||||.|||.||| ||| |||||..||||||..|||.|||.||||..||| ||||| ..||||||
Sbjct 1407 TCCAGGGTCAACAG-TGACGTACCGTTGCCAGTCCTTCTATAAACTCCAGGGCTCTGTAAC-----TGTAACAT 1474
Query 575 GTAGAAACGGACAATGGTCAGAACCACCAAAATGCTTAGATCCATGTGTAATATCACAAGAAATTATGGAAAAA 648
|.|||||...|||.||||||||||||||||.||||.|||||||||||||..||||..||||||..|||.|.|||
Sbjct 1475 GCAGAAATAAACAGTGGTCAGAACCACCAAGATGCCTAGATCCATGTGTGGTATCTGAAGAAAACATGAACAAA 1548
Query 649 TATAACATAAAATTAAAGTGGACAAACCAACAAAAGCTTTATTCAAGAACAGGTGACATAGTTGAATTTGTTTG 722
.||||||||.|.|||||.||||.||||.|...|||.||.|||.|||.||||||.||....||||||||....||
Sbjct 1549 AATAACATACAGTTAAAATGGAGAAACGATGGAAAACTCTATGCAAAAACAGGGGATGCTGTTGAATTCCAGTG 1622
Query 723 TAAATCTGGATATCATCCAACAAA--------ATCTCAT-----TCATTTCGAGCAATGTGTCAGAATGGGAAA 783
||||| |||.|||.| ||.|||| .|||||||||||||.||||||.|.||||||
Sbjct 1623 TAAAT----------TCCCACATAAAGCGATGATATCATCACCACCATTTCGAGCAATCTGTCAGGAAGGGAAA 1686
Query 784 CTGGTATATCCCAGTTGTGAAGAAAAA 810
.|.|.||||||.|..||||||
Sbjct 1687 TTTGAATATCCTATATGTGAA------ 1707
