Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_00765
- Subject:
- NR_002883.1
- Aligned Length:
- 1734
- Identities:
- 883
- Gaps:
- 775
Alignment
Query 1 ------------------------------------------------------------ATGTCTAAGTCAG- 13
|||||||||| ||
Sbjct 1 CTTTCTGCTCTTTGACGCTGCCGAGGAAGCATCGCTGAAGGCTCTTGTAACTCTACCGTCATGTCTAAGT-AGT 73
Query 14 ---AGTCTCCTAAAGAGCCCGAACAGCTGAGGAAGCTCTTCATTGGAGGGTTGAGCTTTGAAACAACTGATGAG 84
||||||..||.|||||.|||||||||.|||||||||||||.||||||.|||||||.||||||||.||.|||
Sbjct 74 CCAAGTCTCTCAAGGAGCCAGAACAGCTGCGGAAGCTCTTCATCGGAGGGCTGAGCTTCGAAACAACCGACGAG 147
Query 85 AGCCTGAGGAGCCATTTTGAGCAATGGGGAACGCTCACGGACTGTGTGGTAATGAGAGATCCAAACACCAAGCG 158
||.|||||||||||||||||||||||||||||.||.||..||||||||||||||||||||||||||||||||.|
Sbjct 148 AGTCTGAGGAGCCATTTTGAGCAATGGGGAACACTAACCAACTGTGTGGTAATGAGAGATCCAAACACCAAGAG 221
Query 159 CTCCAGGGGCTTTGGGTTTGTCACATATGCCACTGTGGAGGAGGTGGATGCAGCTATGAATGCAAGGCCACACA 232
.||||||||||||||||||||||||||||||||||||||.||.||||||||.||.|||||||||||.|||||||
Sbjct 222 ATCCAGGGGCTTTGGGTTTGTCACATATGCCACTGTGGAAGAAGTGGATGCTGCCATGAATGCAAGACCACACA 295
Query 233 AGGTGGATGGAAGAGTTGTGGAACCAAAGAGAGCTGTCTCCAGAGAAGATTCTCAAAGACCAGGTGCCCACTTA 306
|||||||||||||||||||||||||.||||||.|||||||.||||||||||||||..|||||||||||||||||
Sbjct 296 AGGTGGATGGAAGAGTTGTGGAACCTAAGAGAACTGTCTCAAGAGAAGATTCTCAGCGACCAGGTGCCCACTTA 369
Query 307 ACTGTGAAAAAGATATTTGTTGGTGGCATTAAAGAAGACACTGAAGAACATCACCTAAGAGATTATTTTGAACA 380
||||||||||||||.|||||||||||.||||||||||||||||||||||||||||||.|||||||||||||.||
Sbjct 370 ACTGTGAAAAAGATCTTTGTTGGTGGTATTAAAGAAGACACTGAAGAACATCACCTACGAGATTATTTTGAGCA 443
Query 381 GTATGGAAAAATTGAAGTGATTGAAATCATGACTGACCGAGGCAGTGGCAAGAAAAGGGGCTTTGCCTTTGTAA 454
||||||.||.|||||||||||.|||||.|||||||||.||||||||||.||.||.|||||||||||.|||||.|
Sbjct 444 GTATGGGAAGATTGAAGTGATAGAAATTATGACTGACAGAGGCAGTGGGAAAAAGAGGGGCTTTGCTTTTGTTA 517
Query 455 CCTTTGACGACCATGACTCCGTGGATAAGATTGTCATTCAGAAATACCATACTGTGAATGGCCACAACTGTGAA 528
|||||||.|||||||||||.||||||||||||||.|||||||||||||||||||||||||||||||||||||||
Sbjct 518 CCTTTGATGACCATGACTCTGTGGATAAGATTGTTATTCAGAAATACCATACTGTGAATGGCCACAACTGTGAA 591
Query 529 GTTAGAAAAGCCCTGTCAAAGCAAGAGATGGCTAGTGCTTCATCCAGCCAAAGAGGTCGAAGTGGTTCTGGAAA 602
||.|||||.||.||||||||||||||||||||||||||||||||||||||.||||||||.||||||||||||||
Sbjct 592 GTAAGAAAGGCTCTGTCAAAGCAAGAGATGGCTAGTGCTTCATCCAGCCAGAGAGGTCGCAGTGGTTCTGGAAA 665
Query 603 CTTTGGTGGTGGTCGTGGAGGTGGTTTCGGTGGGAATGACAACTTCGGTCGTGGAGGAAACTTCAGTGGTCGTG 676
|||||||||||||||||||||..||||.|||||.||||||||.||..||||.|||||.||||||||||||||||
Sbjct 666 CTTTGGTGGTGGTCGTGGAGGCAGTTTTGGTGGCAATGACAATTTTTGTCGAGGAGGGAACTTCAGTGGTCGTG 739
Query 677 GTGGCTTTGGTGGCAGCCGTGGTGGTGGTGGATATGGTGGCAGTGGGGATGGCTATAATGGATTTGGTAATGAT 750
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct 740 GTGGCTTTGGTGGCAGCCGTGGTGGTGGTGGATATGGTGGCAGTGGGGATGGCTATAATGGATTTGGCAATGAT 813
Query 751 GGAAGCAATTTTGGAGGTGGTGGAAGCTACAATGATTTTGGGAATTACAACAATCAGTCTTCAAATTTTGGACC 824
|||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||.||||||||.||
Sbjct 814 GGAAGCAATTTTGGAGGTGGTGGAAGCTACAATGATTTTGGCAATTACAACAATCAGTCTTCCAATTTTGGGCC 887
Query 825 CATGAAGGGAGGAAATTTTGGAGGCAGAAGCTCTGGCCCCTATGGCGGTGGAGGCCAATACTTTGCAAAACCAC 898
.||||||.|||.|||.|||||||||||.|||||||||||.|||||.|||||||||||.||||||||.|||||||
Sbjct 888 GATGAAGCGAGAAAACTTTGGAGGCAGGAGCTCTGGCCCTTATGGTGGTGGAGGCCAGTACTTTGCTAAACCAC 961
Query 899 GAAACCAAGGTGGCTATGGCGGTTCCAGCAGCAGCAGTAGCTATGGCAGTGGCAGAAGATTT------------ 960
|.||||||||||||||||||.||||||||||||||||||||||||||||||||||.||.||.
Sbjct 962 GGAACCAAGGTGGCTATGGCAGTTCCAGCAGCAGCAGTAGCTATGGCAGTGGCAGGAGGTTCTAGTTACATACA 1035
Query 961 -------------------------------------------------------------------------- 960
Sbjct 1036 GCCAGGAAACAAAGCTTAGCAGGAGAGGAGAGCCAGAGAAGTGACAGGGAAGCTACAGGTTACAACAGATTTGT 1109
Query 961 -------------------------------------------------------------------------- 960
Sbjct 1110 GAACTCAGCCAAGCACAGTGGTGGCAGGACCTACCTGCTACAAAGAAGACATGTTTTAGACAATACTCATGTGT 1183
Query 961 -------------------------------------------------------------------------- 960
Sbjct 1184 GTGGGCAAAAACTCTAGGACTGTATTTATGACTAATTGTATAACAGGTTATTTTAGTTTCTGTTCTGTGGAAAG 1257
Query 961 -------------------------------------------------------------------------- 960
Sbjct 1258 TGTAAAGCATTCCAACAAAAGGTTTTACTGTAGACCTTTTTCACCCATGCTGTTGATTGCTAAATGTAATAGTC 1331
Query 961 -------------------------------------------------------------------------- 960
Sbjct 1332 TGATCATGACGCTGAATAAATGTGTCTTTTTTTTTTTAATGTGCTGTGTAAAGTTAGTCTATTCTGAAGCCATC 1405
Query 961 -------------------------------------------------------------------------- 960
Sbjct 1406 TTGGTAAACTTCCCCAACAGTGTGAAGTTAGAATTCCTTCAGGGTGGTGCCAAGTTCCATTTGGAATTTATTTA 1479
Query 961 -------------------------------------------------------------------------- 960
Sbjct 1480 TGGTTGCTTGGGTGGAGAAGCCATTGTCTTCAAAAACCTTGACGTTGTTAAACTGCCAGTTACTATTGTAACTT 1553
Query 961 -------------------------------------------------------------------------- 960
Sbjct 1554 TTAATGAGTTTCACCATTGAAAGGGTCATCCAAGCAAGGTCACAATTTGGTTATAAAATGGTTGTTGGCACACC 1627
Query 961 -------------------------------------------------------------------------- 960
Sbjct 1628 CTATGCAATATCAAAATTGAATAACGGTATCAGATAAAATAACAGATGGGAATGAAGCTTATGTATCCATTATC 1701
Query 961 -------------------------------- 960
Sbjct 1702 ATGTGTACTCAATAAACGATTTAATTCTCTTG 1733
