Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_00768
- Subject:
- NR_033868.1
- Aligned Length:
- 2049
- Identities:
- 1073
- Gaps:
- 824
Alignment
Query 1 --------ATGGAAACTGAACAGCCAGAAGAAACCTTCCCTAACACTGAAACCAATGGTGAATTTGGTAAACGC 66
||||.|.|.|..||||||.|.||| ||| || ||||
Sbjct 1 AGATGCAGATGGCAGCAGCGCAGCCACAGGAA-------------------------GTG-----GG---ACGC 41
Query 67 --CCTG------CAGAAGATATGGAAGAGGAACAAGCATTTAAAAGATCTAGAAACACTGATGAGATG------ 126
|||| |.| |||| ||| || .|.||| ||
Sbjct 42 AGCCTGTGGCCTCCG-AGAT-TGG------------------------CT----TCTCTG------TGTCCTCC 79
Query 127 -----GTTGA----ATTACG-CATTCTGCTTCAGAGCAAGAATGCTGGGGCAGTGATTGGAAAAGGAGGCAAGA 190
||.|| .|.||| || |||||||||||||||.||.||||||||||||||||||..||||
Sbjct 80 TTGCTGTGGACCCCGTGACGCCA--------CAGAGCAAGAATGCTTGGACAGTGATTGGAAAAGGAGATAAGA 145
Query 191 ATATTAAGGCTCTCCGTACAGACTACAATGCCAGTGTTTCAGTCCCAGACAGCAGTGGCCCCGAGCGCATATTG 264
|||||||||||.||.|||.||||||||..|||||.|||..||.||||||..|||.|||||||.||.||||..||
Sbjct 146 ATATTAAGGCTTTCTGTATAGACTACAGAGCCAGGGTTCTAGCCCCAGAGGGCAATGGCCCCAAGTGCATGCTG 219
Query 265 AGTATCAGTGCTGATATTGAAACAATTGGAGAAATTCTGAAGAAAATCATCCCTACCTTGGAAGAGGGCCTGCA 338
||||||||||||||||||||||||.|||||||||.|||||||||||||||||||||||||||||||
Sbjct 220 AGTATCAGTGCTGATATTGAAACAGTTGGAGAAACTCTGAAGAAAATCATCCCTACCTTGGAAGAG-------- 285
Query 339 GTTGCCATCACCCACTGCAACCAGCCAGCTCCCGCTCGAATCTGATGCTGTGGAATGCTTAAATTACCAACACT 412
|||||.||.|
Sbjct 286 ----------------------------------------------------------------TACCACCATT 295
Query 413 ATAAAGGAAGTGACTTTGACTGCGAGTTGAGGCTGTTGATTCATCAGAGTCTAGCAGGAGGAATTATTGGGGTC 486
||||||||||..|||||||.|||||.|||||||||||||.||||||||||||.||||||||||||||||.||||
Sbjct 296 ATAAAGGAAGCAACTTTGATTGCGAATTGAGGCTGTTGACTCATCAGAGTCTGGCAGGAGGAATTATTGAGGTC 369
Query 487 AAAGGTGCTAAAATCAAAGAACTTCGAGAGAACACTCAAACCACCATCAAGCTTTTCCAGGAATGCTGTCCTCA 560
||||.|||||||||||||||.||||.||.||||||||||||.||.|||||||||||||.|||||||||||||||
Sbjct 370 AAAGATGCTAAAATCAAAGAGCTTCAAGGGAACACTCAAACAACAATCAAGCTTTTCCGGGAATGCTGTCCTCA 443
Query 561 TTCCACTGACAGAGTTGTTCTTATTGGAGGAAAACCCGATAGGGTTGTAGAGTGCATAAAGATCATCCTTGATC 634
||||||||||.||||||||||||.||||| |||..|.||.|.||||||||||||||||| ||.||||||||||
Sbjct 444 TTCCACTGACGGAGTTGTTCTTACTGGAG--AAAGACTATGGAGTTGTAGAGTGCATAAA-ATTATCCTTGATC 514
Query 635 TTATATCTGAGTCTCCCATCAAAGGACGTGCACAGCCTTATGATCCCAATTTTTACGATGAAACCTAT------ 702
||||||||||||||||.| ||.||||.||||||||.|||||.|||||||||||.|.||||.|||||||
Sbjct 515 TTATATCTGAGTCTCCTA-CAGAGGATGTGCACAGACTTATAATCCCAATTTTCATGATGTAACCTATTACATT 587
Query 703 -------------------GATTATGGTGGTTTTACAATGATGTTTGATGACCGTCGCGGACGCCCAGTGGGAT 757
.||||||||||||||||||||.|||.||||||||..|..|||.|||..|||||.|
Sbjct 588 ACATGATGTAACACCATTATATTATGGTGGTTTTACAATGTTGTCTGATGACCACCATGGATGCCTGGTGGGGT 661
Query 758 TTCCCATGCGGGGAAGAGGTGGTTTTGACAGAATGCCTCCTGGTCGGGGTGGGCGTCCCATGCCTCCATCTAGA 831
||||||.||.|||||||||||||||||||||||||.||.|..|||.|||||||.||.|||||...||||||.||
Sbjct 662 TTCCCAGGCAGGGAAGAGGTGGTTTTGACAGAATGTCTACCAGTCAGGGTGGGTGTTCCATGTGGCCATCTGGA 735
Query 832 AGAGATTATGATGATATGAGCCCTCGTCGAGGACCACCTCCCCCTCCTCCCGGACGAGGCGGCCGGGGTGGTAG 905
||||||||||||||.|||||.|||.||.|||||||||||||.|||.||...||||.|||.|.|.||||||||||
Sbjct 736 AGAGATTATGATGACATGAGTCCTTGTTGAGGACCACCTCCTCCTTCTTTTGGACAAGGTGCCTGGGGTGGTAG 809
Query 906 CAGAGCTCGGAATCTTCCTCTTCCTCCACCACCACCACCTAGAGGG--GGAGACCTCATGGCCTATGACAGAAG 977
||.||||..|||||||||||||.||||||.|||||.|| |||||| ||||||.|.|.|||||||||||||||
Sbjct 810 CAAAGCTGAGAATCTTCCTCTTTCTCCACTACCACTAC--AGAGGGTAGGAGACATAAGGGCCTATGACAGAAG 881
Query 978 AGGGAGACCTGGAGACCGTTACGACGGCATGGTTGGTTTCAGTGCTGATGAAACTTGGGACTCTGCAATAGATA 1051
|||.|||||||||||..||||| |.|||||||.|||.|||||||||||||||||||||||||||||||||||||
Sbjct 882 AGGAAGACCTGGAGATGGTTAC-ATGGCATGGCTGGCTTCAGTGCTGATGAAACTTGGGACTCTGCAATAGATA 954
Query 1052 CATGGAGCCCATCAGAATGGCAGATGGCTTATGAACCACAGGGTGGCTCCGGATATGATTATTCCTATGCAGGG 1125
|||||||..||||||||||||.|||||||||||||||||||.||||||||.|||||.|||||||||||||||.|
Sbjct 955 CATGGAGTGCATCAGAATGGCTGATGGCTTATGAACCACAGAGTGGCTCCAGATATAATTATTCCTATGCAGCG 1028
Query 1126 GGTCGTGGCTCATATGGTGATCTTGGTGGACCTATTATTACTACACAAGTAACTATTCCCAAAGATTTGGCTGG 1199
|...|||||||||| ||||||||||||||||||||||||||.|||||||||||||.||||||.|||
Sbjct 1029 GACAGTGGCTCATA---------TGGTGGACCTATTATTACTACACAAGGAACTATTCCCAAATATTTGGTTGG 1093
Query 1200 ATCTATTATTGGCAAAGGTGGTCAGCGGATTAAACAAATCCGTCATGAGTCGGGAGCTTCGATCAAAATTGATG 1273
|||||||||||||||||||||||||.|.||.||||||||||.|||||||| .||||||||.|..|||.||||||
Sbjct 1094 ATCTATTATTGGCAAAGGTGGTCAGTGAATCAAACAAATCCATCATGAGT-TGGAGCTTCAACTAAAGTTGATG 1166
Query 1274 AGCCTTTAGAAGGATCCGAAGATCGGATCATTACCATTACAGGAACACAGGACCAGATACAGAATGCACAGTAT 1347
||||||||||||||...|||||||.||||||||.|||||.|||||||.|||||||||||.||||||||||||||
Sbjct 1167 AGCCTTTAGAAGGAGGTGAAGATCAGATCATTATCATTATAGGAACATAGGACCAGATATAGAATGCACAGTAT 1240
Query 1348 TTGCTGCAGAACAGTGTGAAGCAGT--------------------ATGC-AGATG-----TTGAAGGATTC--- 1392
|||||||||||||||.||||||||| |||| || || .|||||||.||
Sbjct 1241 TTGCTGCAGAACAGTATGAAGCAGTTTTCCGGAAAGTTTTTACTAATGCTAG-TGAAGGACTGAAGGAGTCCTG 1313
Query 1393 -------------------------------------------------------------------------- 1392
Sbjct 1314 CATCTTTTTTTTTTTTTACATTTGCTTCTGTTTAAAAAGCCATCATGCCTCTGCTTCACAGGTGTTTTGCATCT 1387
Query 1393 -------------------------------------------------------------------------- 1392
Sbjct 1388 GAGGTGTAGTGAAACCTTTGCTGTTCACCAGATGTAAGGTTTTAGTTCCTTACAAACAGGGTTGGGGATGTAGG 1461
Query 1393 -------------------------------------------------------------------------- 1392
Sbjct 1462 GAAGGGCTTGCAAAAACTAATGTTGAAATTTTGAAACAGCAGTAGAATGAGCGGATTTTTTTTTGTGTTCATTG 1535
Query 1393 -------------------------------------------------------------------------- 1392
Sbjct 1536 TTACTGGTTTAAAAAAATGTTCCCCTATGTAATTTTTGTGAACACCTTACTTTGTGGTCACTGTAACATTTGAG 1609
Query 1393 -------------------------------------------------------------------------- 1392
Sbjct 1610 GGGTGAGACAGGGAGGAAGAGTAACAATAGGCCACATGTCCCTGGCATCTGTTCAGAGCAGTGTGCAGAATGTA 1683
Query 1393 -------------------------------------------------------------------------- 1392
Sbjct 1684 AGGCTCTTTAGTAAGAAATGTTTTACGACTTTTAAGATAAATTTAGATAAACCTAAAATAGTCACAGAGGATGT 1757
Query 1393 -------------------------------------------------------------------------- 1392
Sbjct 1758 AAAATAAAAGTGAAAGACTCCCTTCTTACCCCTCACCCCTCCATCATACCTTTTAAAACTAACAACTGTGAATC 1831
Query 1393 --------------------------------------------------- 1392
Sbjct 1832 GTTTATTGTGTTAACCCTATACGATCATTTTAAATAAAAAATAAGCCTGTG 1882
