Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_00768
- Subject:
- NR_153502.1
- Aligned Length:
- 2843
- Identities:
- 1264
- Gaps:
- 1495
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTGCGCGAACGAGAAAGGAGGAGGGCGCTACAGGCGACAGCGCTGCAGACGCCATTATCCTCTGCTTCTCCGC 74
Query 1 -------------------------------------------------------------------------A 1
|
Sbjct 75 TGCACGGACGTCGCCGTCGTGCTCGTCTCCCACTCGATTGCGGCCTATTGGTGGATCCATTTAATTCAAGAAAA 148
Query 2 TGGAAACTGAACAGCCAGAAGAAACCTTCCCTAACACTGAAACCAATGGTGAATTTGGTAAACGCCCTGCAGAA 75
||||.||.|||||||||||||||||||||||.|||||.||||||||||||||||||||||||||||||||||||
Sbjct 149 TGGAGACCGAACAGCCAGAAGAAACCTTCCCCAACACCGAAACCAATGGTGAATTTGGTAAACGCCCTGCAGAA 222
Query 76 GATATGGAAGAGGAACAAGCATTTAAAAGATCTAGAAACACTGATGAGATGGTTGAATTACGCATTCTGCTTCA 149
||||||||||||||.|||||.|||||||||||||||||.||||||||||||||||||||.||||||.|||||||
Sbjct 223 GATATGGAAGAGGAGCAAGCCTTTAAAAGATCTAGAAATACTGATGAGATGGTTGAATTGCGCATTTTGCTTCA 296
Query 150 GAGCAAGAATGCTGGGGCAGTGATTGGAAAAGGAGGCAAGAATATTAAGGCTCTCCGTACAGACTACAATGCCA 223
|||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GAGCAAGAATGCTGGAGCAGTGATTGGAAAAGGAGGCAAGAATATTAAGGCTCTCCGTACAGAC---------- 360
Query 224 GTGTTTCAGTCCCAGACAGCAGTGGCCCCGAGCGCATATTGAGTATCAGTGCTGATATTGAAACAATTGGAGAA 297
||||.||||||||||||||||||||||.||.|||||||||
Sbjct 361 ----------------------------------CATACTGAGTATCAGTGCTGATATTGAGACGATTGGAGAA 400
Query 298 ATTCTGAAGAAAATCATCCCTACCTTGGAAGAGGGCCTGCAGTTGCCATCACCCACTGCAACCAGCCAGCTCCC 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 401 ATTCTGAAGAAAATCATCCCTACCTTGGAAGAGGGCCTGCAGTTGCCATCACCCACTGCAACCAGCCAGCTCCC 474
Query 372 GCTCGAATCTGATGCTGTGGAATGCTTAAATTACCAACACTATAAAGGAAGTGACTTTGACTGCGAGTTGAGGC 445
|||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||.|||||||||||.|
Sbjct 475 GCTCGAATCTGATGCTGTGGAATGCTTAAATTACCAACATTATAAAGGAAGTGACTTTGATTGCGAGTTGAGAC 548
Query 446 TGTTGATTCATCAGAGTCTAGCAGGAGGAATTATTGGGGTCAAAGGTGCTAAAATCAAAGAACTTCGAGAGAAC 519
|||||||||||||||||||.|||||||||||.|||||.||.|||||||||||||||||||||||||||||.|||
Sbjct 549 TGTTGATTCATCAGAGTCTGGCAGGAGGAATAATTGGTGTTAAAGGTGCTAAAATCAAAGAACTTCGAGAAAAC 622
Query 520 ACTCAAACCACCATCAAGCTTTTCCAGGAATGCTGTCCTCATTCCACTGACAGAGTTGTTCTTATTGGAGGAAA 593
|||||.||.||.|||||||||||||||||.|||||.|||||.||.|||||||||||||||||||||||||||||
Sbjct 623 ACTCAGACAACAATCAAGCTTTTCCAGGAGTGCTGCCCTCACTCTACTGACAGAGTTGTTCTTATTGGAGGAAA 696
Query 594 ACCCGATAGGGTTGTAGAGTGCATAAAGATCATCCTTGATCTTATATCTGAGTCTCCCATCAAAGGACGTGCAC 667
|||.||||||||||||||.|||||.||||||||||||||.||||||||||||||||||||||||||||||||||
Sbjct 697 ACCTGATAGGGTTGTAGAATGCATCAAGATCATCCTTGACCTTATATCTGAGTCTCCCATCAAAGGACGTGCAC 770
Query 668 AGCCTTATGATCCCAATTTTTACGATGAAACCTATGATTATGGTGGTTTTACAATGATGTTTGATGACCGTCGC 741
|.||||||||||||||.|||||.|||||.|||||||||||||||||||||||||||||||||||||||||.||.
Sbjct 771 AACCTTATGATCCCAACTTTTATGATGAGACCTATGATTATGGTGGTTTTACAATGATGTTTGATGACCGCCGA 844
Query 742 GGACGCCCAGTGGGATTTCCCATGCGGGGAAGAGGTGGTTTTGACAGAATGCCTCCTGGTCGGGGTGGGCGTCC 815
|||||.||.||||||||.||||||.|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 845 GGACGACCTGTGGGATTCCCCATGAGGGGAAGAGGTGGTTTTGACAGAATGCCTCCTGGTCGGGGTGGGCGTCC 918
Query 816 CATGCCTCCATCTAGAAGAGATTATGATGATATGAGCCCTCGTCGAGGACCACCTCCCCCTCCTCCCGGACGAG 889
|||||||||.|||||||||||||||||||||||||||||||||||||||||.||.||.||.||.||.||.||||
Sbjct 919 CATGCCTCCTTCTAGAAGAGATTATGATGATATGAGCCCTCGTCGAGGACCTCCACCACCACCACCTGGTCGAG 992
Query 890 GCGGCCGGGGTGGTAGCAGAGCTCGGAATCTTCCTCTTCCTCCACCACCACCACCTAGAGGGGGAGACCTCATG 963
|.|||||||||||.||||||||.||||||||.|||||||||||.|||||||||||.|||||||||||.||.|||
Sbjct 993 GTGGCCGGGGTGGCAGCAGAGCCCGGAATCTGCCTCTTCCTCCTCCACCACCACCCAGAGGGGGAGATCTAATG 1066
Query 964 GCCTATGACAGAAGAGGGAGACCTGGAGACCGTTACGACGGCATGGTTGGTTTCAGTGCTGATGAAACTTGGGA 1037
||.||||||||||||||.||.|||||||||||.||.||.|||||||||||.|||||||||||||||||||||||
Sbjct 1067 GCTTATGACAGAAGAGGAAGGCCTGGAGACCGCTATGATGGCATGGTTGGGTTCAGTGCTGATGAAACTTGGGA 1140
Query 1038 CTCTGCAATAGATACATGGAGCCCATCAGAATGGCAGATGGCTTATGAACCACAGGGTGGCTCCGGATATGATT 1111
.||||||||.||.|||||||||||||||||||||||.|||||||||||||||||||||||.||.||||||||.|
Sbjct 1141 TTCTGCAATTGACACATGGAGCCCATCAGAATGGCAAATGGCTTATGAACCACAGGGTGGTTCTGGATATGACT 1214
Query 1112 ATTCCTATGCAGGGGGTCGTGGCTCATATGGTGATCTTGGTGGACCTATTATTACTACACAAGTAACTATTCCC 1185
||||.|||||||||||.|||||||||||||||||||||||.|||||||||||.|||||||||||||||||||||
Sbjct 1215 ATTCTTATGCAGGGGGCCGTGGCTCATATGGTGATCTTGGCGGACCTATTATCACTACACAAGTAACTATTCCC 1288
Query 1186 AAAGATTTGGCTGGATCTATTATTGGCAAAGGTGGTCAGCGGATTAAACAAATCCGTCATGAGTCGGGAGCTTC 1259
|||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||.||.|||||.||
Sbjct 1289 AAAGATTTGGCTGGATCTATTATTGGCAAAGGTGGTCAGCGGATTAAACAAATTCGTCATGAATCTGGAGCATC 1362
Query 1260 GATCAAAATTGATGAGCCTTTAGAAGGATCCGAAGATCGGATCATTACCATTACAGGAACACAGGACCAGATAC 1333
.||||||||||||||.||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||
Sbjct 1363 AATCAAAATTGATGAACCTTTAGAAGGATCTGAAGATCGGATCATTACCATTACAGGAACACAGGACCAGATAC 1436
Query 1334 AGAATGCACAGTATTTGCTGCAGAACAGTGTGAAGCAGTATGCAGATGTTGAAGGATTC--------------- 1392
||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1437 AGAACGCACAGTATTTGCTGCAGAACAGTGTGAAGCAGTATGCAGATGTTGAAGGATTCTAATGCAAGATATTT 1510
Query 1393 -------------------------------------------------------------------------- 1392
Sbjct 1511 TTTCTTTTTTATAGTGTGAAGCAGTATTCTGGAAAGTTTTTCTAAGACTAGTGAAGAACTGAAGGAGTCCTGCA 1584
Query 1393 -------------------------------------------------------------------------- 1392
Sbjct 1585 TCTTTTTTTTTTTATCTGCTTCTGTTTAAAAAGCCAACATTCCTCTGCTTCATAGGTGTTCTGCATTTGAGGTG 1658
Query 1393 -------------------------------------------------------------------------- 1392
Sbjct 1659 TAGTGAAATCTTTGCTGTTCACCAGATGTAATGTTTTAGTTCCTTACAAACAGGGTTGGGGGGAGGGCATGCAA 1732
Query 1393 -------------------------------------------------------------------------- 1392
Sbjct 1733 AAACTAACATTGAAATTTTGAAACAGCAGCAGAGTGAGTGACTTTTATTTTTTGTTCATTGTTGGTGGTTTTAA 1806
Query 1393 -------------------------------------------------------------------------- 1392
Sbjct 1807 AAAAAATTCCCCCCATGTAATTATTGTGAACACCTTACTTTGTGGTCACTGTAACATTGGGGGGTGGGACAGGG 1880
Query 1393 -------------------------------------------------------------------------- 1392
Sbjct 1881 AGGAAAGTAATAGTCCACATGTCCCTGGCATTTGTTCAGAGCAGTGTGCAGAATGTAATGCTCTTTTGTAAGAA 1954
Query 1393 -------------------------------------------------------------------------- 1392
Sbjct 1955 ACGTTTTATGATTTTTAAAATAAATTTAGTGAATCTATTTTTGGTGGTCTTTTTTTTTTTTAAGACAATTTCAA 2028
Query 1393 -------------------------------------------------------------------------- 1392
Sbjct 2029 ATGGTGGTTGAATTTTCCAGCCCACCCCTAAACTAAACACTAAGTTTGATTTTCAGCAGCTCCTCTGTTGGATA 2102
Query 1393 -------------------------------------------------------------------------- 1392
Sbjct 2103 TAAGTGCACCTCTTGGACATAGACAAAATACATTGGCAAACTCAGTTTGGGTGACTTCTTAATGGTTGGAAAGA 2176
Query 1393 -------------------------------------------------------------------------- 1392
Sbjct 2177 CTTGGCTTGATAAATTTCCATCACATATTCATGCTTATAATAAGCTTGGGATTTTGTTTGTTTTTGCAAATGTT 2250
Query 1393 -------------------------------------------------------------------------- 1392
Sbjct 2251 TGCCACTACTTTTCAACAGTTTTCTGTTAGTTGTGGAGAACTGCGGTGGGGAGCAATACTACAAGAGTTACGCA 2324
Query 1393 -------------------------------------------------------------------------- 1392
Sbjct 2325 TCTTAAGTATATGCCAGAAGCCTGATGGGCAATGAGCTTTATTAACCAGAGTAAACTTGGTTATGGAAGTGGCT 2398
Query 1393 -------------------------------------------------------------------------- 1392
Sbjct 2399 GATGCTGAATAAATCCTGGTTATTTTTGTTAGATAATTTCTCACCTATAGACTTAAAGCTGTCAACCTGCTAGT 2472
Query 1393 -------------------------------------------------------------------------- 1392
Sbjct 2473 GTCTTGTTAGTTGAACTTTGTAAAAATATATATATATACTTGTTTTTCCATTGTATGCACAATGAAAGAAAAAA 2546
Query 1393 -------------------------------------------------------------------------- 1392
Sbjct 2547 GATGTACCATTTCTCTGTTGTGTGTTGAATTATGTAGGAAATGTTTGTGAACGATTCGAAAAAAATGGAAAAAG 2620
Query 1393 -------------------------------------------------------------------------- 1392
Sbjct 2621 TTCCTGTGGATGTTTTGTGTAGTAACTTGGCATCTGTATTGATAGTTCAAAATCCACATCTAAATAAAACTTCC 2694
Query 1393 -------------------------------------------------------------------------- 1392
Sbjct 2695 ATGATGTTAGTTATGACGTGTGCCCAATTTGAAAAGGGGTTGATTAATACATGTAAAGTTTGTTGAAGTGTTCC 2768
Query 1393 ------------------------------- 1392
Sbjct 2769 TCTTGTAAGGAAATACAGTAATCTTAAATTA 2799
