Nucleotide Global Alignment

Description

• Query: ccsbBroad304_00888
• Subject: NM_001142593.3
• Aligned Length: 1248
• Identities: 923
• Gaps: 312

Alignment

Query    1  ATGCAGACCTTTCTGAAAGGGAAGAGAGTTGGCTACTGGCTGAGCGAGAAGAAAATCAAGAAGCTGAATTTCCA  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGCAGACCTTTCTGAAAGGGAAGAGAGTTGGCTACTGGCTGAGCGAGAAGAAAATCAAGAAGCTGAATTTCCA  74

Query   75  GGCCTTCGCCGAGCTGTGCAGGAAGCGAGGGATGGAGGTTGTGCAGCTGAACCTTAGCCGGCCGATCGAGGAGC  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  GGCCTTCGCCGAGCTGTGCAGGAAGCGAGGGATGGAGGTTGTGCAGCTGAACCTTAGCCGGCCGATCGAGGAGC  148

Query  149  AGGGCCCCCTGGACGTCATCATCCACAAGCTGACTGACGTCATCCTTGAAGCCGACCAGAATGATAGCCAGTCC  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  AGGGCCCCCTGGACGTCATCATCCACAAGCTGACTGACGTCATCCTTGAAGCCGACCAGAATGATAGCCAGTCC  222

Query  223  CTGGAGCTGGTGCACAGGTTCCAGGAGTACATCGATGCCCACCCTGAGACCATCGTCCTGGACCCGCTCCCTGC  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CTGGAGCTGGTGCACAGGTTCCAGGAGTACATCGATGCCCACCCTGAGACCATCGTCCTGGACCCGCTCCCTGC  296

Query  297  CATCAGAACCCTGCTTGACCGCTCCAAGTCCTATGAGCTCATCCGGAAGATTGAGGCCTACATGGAAGACGACA  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CATCAGAACCCTGCTTGACCGCTCCAAGTCCTATGAGCTCATCCGGAAGATTGAGGCCTACATGGAAGACGACA  370

Query  371  GGATCTGCTCGCCACCCTTCATGGAGCTCACGAGCCTGTGCGGGGATGACACCATGCGGCTGCTGGAGAAGAAC  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  GGATCTGCTCGCCACCCTTCATGGAGCTCACGAGCCTGTGCGGGGATGACACCATGCGGCTGCTGGAGAAGAAC  444

Query  445  GGCTTGACTTTCCCATTCATTTGCAAAACCAGAGTGGCTCATGGCACCAACTCTCACGAGATGGCTATCGTGTT  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GGCTTGACTTTCCCATTCATTTGCAAAACCAGAGTGGCTCATGGCACCAACTCTCACGAGATGGCTATCGTGTT  518

Query  519  CAACCAGGAGGGCCTGAACGCCATCCAGCCACCCTGCGTGGTCCAGAATTTCATCAACCACAACGCCGTCCTGT  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CAACCAGGAGGGCCTGAACGCCATCCAGCCACCCTGCGTGGTCCAGAATTTCATCAACCACAACGCCGTCCTGT  592

Query  593  ACAAGGTGTTCGTGGTTGGCGAGTCCTACACCGTGGTCCAGAGGCCCTCACTCAAGAACTTCTCCGCAGGCACA  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  ACAAGGTGTTCGTGGTTGGCGAGTCCTACACCGTGGTCCAGAGGCCCTCACTCAAGAACTTCTCCGCAGGCACA  666

Query  667  TCAGACCGTGAGTCCATCTTCTTCAACAGCCACAACGTGTCAAAGCCGGAGTCGTCATCGGTCCTGACGGAGCT  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  TCAGACCGTGAGTCCATCTTCTTCAACAGCCACAACGTGTCAAAGCCGGAGTCGTCATCGGTCCTGACGGAGCT  740

Query  741  GGACAAGATCGAGGGCGTGTTCGAGCGGCCGAGCGACGAGGTCATCCGGGAGCTCTCCCGGGCCCTGCGGCAGG  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  GGACAAGATCGAGGGCGTGTTCGAGCGGCCGAGCGACGAGGTCATCCGGGAGCTCTCCCGGGCCCTGCGGCAGG  814

Query  815  CACTGGGCGTGTCACTCTTCGGCATCGACATCATCATCAACAACCAGACAGGGCAGCACGCCGTCATTGACATC  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  CACTGGGCGTGTCACTCTTCGGCATCGACATCATCATCAACAACCAGACAGGGCAGCACGCCGTCATTGACATC  888

Query  889  AATGCCTTCCCAGGGGACTGCCA---------AGTGTGCTTTATAGAAGGCTGGAAGACCGAC-----------  942
            ||||||||||||||   ||.|.|         .|.||.|||.|.|||...|..|||   |.||           
Sbjct  889  AATGCCTTCCCAGG---CTACGAGGGCGTGAGCGAGTTCTTCACAGACCTCCTGAA---CCACATCGCCACTGT  956

Query  943  --------------------------------------------------------------------------  942
                                                                                      
Sbjct  957  CCTGCAGGGCCAGAGCACAGCCATGGCAGCCACAGGGGACGTGGCCCTGCTGAGGCACAGCAAGCTTCTGGCCG  1030

Query  943  --------------------------------------------------------------------------  942
                                                                                      
Sbjct 1031  AGCCGGCGGGCGGCCTGGTGGGCGAGCGGACATGCAGCGCCAGCCCCGGCTGCTGCGGCAGCATGATGGGCCAG  1104

Query  943  --------------------------------------------------------------------------  942
                                                                                      
Sbjct 1105  GACGCGCCCTGGAAGGCTGAGGCCGACGCGGGCGGCACCGCCAAGCTGCCGCACCAGAGACTCGGCTGCAACGC  1178

Query  943  ----------------------------------------------------------------  942
                                                                            
Sbjct 1179  CGGCGTGTCGCCCAGCTTCCAGCAGCATTGTGTGGCCTCCCTGGCCACCAAGGCCTCCTCCCAG  1242