Nucleotide Global Alignment

Description

• Query: ccsbBroad304_00888
• Subject: NM_172584.3
• Aligned Length: 1275
• Identities: 833
• Gaps: 351

Alignment

Query    1  ATGCAGACCTTTCTGAAAGGGAAGAGAGTTGGCTACTGGCTGAGCGAGAAGAAAATCAAGAAGCTGAATTTCCA  74
            |||||||||||.||||||||||||||||||||||||||||||||||||||||||.||||||||||.||||||||
Sbjct    1  ATGCAGACCTTCCTGAAAGGGAAGAGAGTTGGCTACTGGCTGAGCGAGAAGAAAGTCAAGAAGCTCAATTTCCA  74

Query   75  GGCCTTCGCCGAGCTGTGCAGGAAGCGAGGGATGGAGGTTGTGCAGCTGAACCTTAGCCGGCCGATCGAGGAGC  148
            |||||||||.|||||||||||||||||||||||.||.||.||||||||||||||.|||.|.|||||.|||||||
Sbjct   75  GGCCTTCGCGGAGCTGTGCAGGAAGCGAGGGATAGAAGTCGTGCAGCTGAACCTCAGCAGACCGATTGAGGAGC  148

Query  149  AGGGCCCCCTGGACGTCATCATCCACAAGCTGACTGACGTCATCCTTGAAGCCGACCAGAATGATAGCCAGTCC  222
            ||||||||||||||||||||||||||||||||||.||.||||||||.||.||.|||||||||||.|||||||||
Sbjct  149  AGGGCCCCCTGGACGTCATCATCCACAAGCTGACCGATGTCATCCTCGAGGCAGACCAGAATGACAGCCAGTCC  222

Query  223  CTGGAGCTGGTGCACAGGTTCCAGGAGTACATCGATGCCCACCCTGAGACCATCGTCCTGGACCCGCTCCCTGC  296
            |||||..||||||||||||||||.||||||||||||||.||||||||||||||||||.||||.||.|||||.||
Sbjct  223  CTGGAATTGGTGCACAGGTTCCAAGAGTACATCGATGCTCACCCTGAGACCATCGTCTTGGATCCCCTCCCCGC  296

Query  297  CATCAGAACCCTGCTTGACCGCTCCAAGTCCTATGAGCTCATCCGGAAGATTGAGGCCTACATGGAAGACGACA  370
            ||||||.||||||.|.|||||.|||||||||||.||.||.|||||.|||||.||||||||||||.||||.||||
Sbjct  297  CATCAGGACCCTGTTAGACCGTTCCAAGTCCTACGAACTTATCCGAAAGATCGAGGCCTACATGAAAGATGACA  370

Query  371  GGATCTGCTCGCCACCCTTCATGGAGCTCACGAGCCTGTGCGGGGATGACACCATGCGGCTGCTGGAGAAGAAC  444
            |.|||||||||||.||.|||||||||||||||||||||||.|||||.|||||||||.|||||||||||.|||||
Sbjct  371  GAATCTGCTCGCCGCCTTTCATGGAGCTCACGAGCCTGTGTGGGGAGGACACCATGAGGCTGCTGGAGCAGAAC  444

Query  445  GGCTTGACTTTCCCATTCATTTGCAAAACCAGAGTGGCTCATGGCACCAACTCTCACGAGATGGCTATCGTGTT  518
            |||.||.|.|||||.|||||||||||||||||||||||||||||.|||||||||||.|||||||||||.|||||
Sbjct  445  GGCCTGGCCTTCCCCTTCATTTGCAAAACCAGAGTGGCTCATGGAACCAACTCTCATGAGATGGCTATTGTGTT  518

Query  519  CAACCAGGAGGGCCTGAACGCCATCCAGCCACCCTGCGTGGTCCAGAATTTCATCAACCACAACGCCGTCCTGT  592
            ||||||.|||||||||||.|||||||||||.|||||.|||||||||||.||||||||||||||.||.|||||||
Sbjct  519  CAACCAAGAGGGCCTGAATGCCATCCAGCCTCCCTGTGTGGTCCAGAACTTCATCAACCACAATGCTGTCCTGT  592

Query  593  ACAAGGTGTTCGTGGTTGGCGAGTCCTACACCGTGGTCCAGAGGCCCTCACTCAAGAACTTCTCCGCAGGCACA  666
            ||||||||||.|||||.||||||||||||||.|||||||||||.||||||||||||||||||||.||.||||||
Sbjct  593  ACAAGGTGTTTGTGGTGGGCGAGTCCTACACAGTGGTCCAGAGACCCTCACTCAAGAACTTCTCTGCGGGCACA  666

Query  667  TCAGACCGTGAGTCCATCTTCTTCAACAGCCACAACGTGTCAAAGCCGGAGTCGTCATCGGTCCTGACGGAGCT  740
            |||||.|||||||||||||||||||||||||||||.|||||||||||||||||.|||||.|||||.||.|||||
Sbjct  667  TCAGATCGTGAGTCCATCTTCTTCAACAGCCACAATGTGTCAAAGCCGGAGTCTTCATCAGTCCTCACTGAGCT  740

Query  741  GGACAAGATCGAGGGCGTGTTCGAGCGGCCGAGCGACGAGGTCATCCGGGAGCTCTCCCGGGCCCTGCGGCAGG  814
            |||||||||||||||.||||||||.|||||.|||||.|||||.|||||||||||.||||||||.||||||||||
Sbjct  741  GGACAAGATCGAGGGTGTGTTCGAACGGCCAAGCGATGAGGTTATCCGGGAGCTGTCCCGGGCTCTGCGGCAGG  814

Query  815  CACTGGGCGTGTCACTCTTCGGCATCGACATCATCATCAACAACCAGACAGGGCAGCACGCCGTCATTGACATC  888
            |.|||||.||||||||.||.||.||.|||||||||||.|||||||||||.||||||||.||.|||||.||..||
Sbjct  815  CGCTGGGAGTGTCACTGTTTGGAATTGACATCATCATTAACAACCAGACCGGGCAGCATGCAGTCATCGATGTC  888

Query  889  AATGCCTTCCCAGG-------GGACTGCCAAGT--GTGCTTTATAGAAGGCTGGAAGACCGAC-----------  942
            ||||||||||||||       |||.||   |||  ||.||||               ||||||           
Sbjct  889  AATGCCTTCCCAGGCTATGAAGGAGTG---AGTGAGTTCTTT---------------ACCGACCTCCTGAACCA  944

Query  943  --------------------------------------------------------------------------  942
                                                                                      
Sbjct  945  CATTGCCACAGTTCTGCAAGGCCAGAGCACGGGAGGAGCTGCCACGGAGGAAGTGGCCCCGCTAAGGCACAACA  1018

Query  943  --------------------------------------------------------------------------  942
                                                                                      
Sbjct 1019  GGCTCCTGGCGGAACCGGCAGGCAGCCTGGCTGGGGAGCGGACGTGCAGTGCCAGCCCTGGCTGCTGTGGCAGC  1092

Query  943  --------------------------------------------------------------------------  942
                                                                                      
Sbjct 1093  ATGAAGGGCCAGGACACACCCTGGAAGACTGAGACCGAAGCAGGCAACATGGGCGCTGGTGCTTCCGCCAAGCT  1166

Query  943  --------------------------------------------------------------------------  942
                                                                                      
Sbjct 1167  GCCGCACCAGAGACTTGGCTGCACCACTGGCGTATCACCCAGCTTCCAGCAGCACTGTGTGGCCTCTCTGGCCA  1240

Query  943  -----------------  942
                             
Sbjct 1241  CCAAGGCTTCCTCACAG  1257