Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_00903
- Subject:
- XM_011241982.2
- Aligned Length:
- 2091
- Identities:
- 1272
- Gaps:
- 633
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGACACGGCCTCGTCCCCGCCCAGTGCTGAAAGGAAGCGCGCGGGTTGGAGCCGCCTGCTAGGCGCCCGGCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGGCAGCGCGGTGGTCAAGAAGTGTCCCTTCTCACTGGAGCTGGCCGAAGGTGGCCCTGAGGGCAGCACGGTCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATGCGCCCATCGCGCCAACCGGAGCCCCCGGGCTCGCGCCCCCCATGTCGACCCCAGTGTCGCCCGCCCCGGCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCTGCAGACCTCGGCCCACGTCCGCGGGTGAGCCTTGACCCGCGGGTCTCCATCTACAGTGCGCGCCGCCCGCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCTGGCGCGCACCCACATCCAGGGCCGAGTCTACAACTTCCTCGAGCGCCCCACGGGTTGGAAGTGTTTCGTGT 370
Query 1 --------------------------------------------------------------ATG------GAC 6
||| |.|
Sbjct 371 ACCACTTCACCGTCCCTGGGACAATGCATCAGCTCCCCACTTCTATTCTGATCCCCAAGAACATGCCAGGAGGC 444
Query 7 TTCCTCATCGTCCTGGTCTGCCTCATCTTCAGCGTGCTGTCCACCATCGAGCAGTATGCCGCCCTGGCCACGGG 80
||||||||.||.||||||||||||||||||||.||.||||||||.||.||||||||||||||.||||||||.||
Sbjct 445 TTCCTCATTGTTCTGGTCTGCCTCATCTTCAGTGTCCTGTCCACTATTGAGCAGTATGCCGCTCTGGCCACCGG 518
Query 81 GACTCTCTTCTGGATGGAGATCGTGCTGGTGGTGTTCTTCGGGACGGAGTACGTGGTCCGCCTCTGGTCCGCCG 154
|||.|||||||||||||||||.||.||.|||||||||||.|||||.||.||.|||||||||||||||||.||.|
Sbjct 519 GACCCTCTTCTGGATGGAGATTGTCCTTGTGGTGTTCTTTGGGACAGAATATGTGGTCCGCCTCTGGTCTGCAG 592
Query 155 GCTGCCGCAGCAAGTACGTGGGCCTCTGGGGGCGGCTGCGCTTTGCCCGGAAGCCCATTTCCATCATCGACCTC 228
|||||||||||||||||||||||.|||||||.|||||.||.||||||||||||||||||||||||||.||||||
Sbjct 593 GCTGCCGCAGCAAGTACGTGGGCATCTGGGGCCGGCTACGTTTTGCCCGGAAGCCCATTTCCATCATTGACCTC 666
Query 229 ATCGTGGTCGTGGCCTCCATGGTGGTCCTCTGCGTGGGCTCCAAGGGGCAGGTGTTTGCCACGTCGGCCATCAG 302
||||||||.||.|||||.|||||.||||||||||||||.|||||.||.||.|||||.|||||.||.||.|||||
Sbjct 667 ATCGTGGTTGTAGCCTCTATGGTTGTCCTCTGCGTGGGTTCCAAAGGACAAGTGTTCGCCACATCAGCTATCAG 740
Query 303 GGGCATCCGCTTCCTGCAGATCCTGAGGATGCTACACGTCGACCGCCAGGGAGGCACCTGGAGGCTCCTGGGCT 376
|||.|||||||||||.|||||||||.|||||||.||.|||||.||||||||.||.|||||||||||||||||||
Sbjct 741 GGGTATCCGCTTCCTTCAGATCCTGCGGATGCTGCATGTCGATCGCCAGGGGGGTACCTGGAGGCTCCTGGGCT 814
Query 377 CCGTGGTCTTCATCCACCGCCAGGAGCTGATAACCACCCTGTACATCGGCTTCCTGGGCCTCATCTTCTCCTCG 450
|.||.||||||||.|||||||||||||||||.||||||||||||||.|||||.||||||||.|||||||||||.
Sbjct 815 CTGTAGTCTTCATTCACCGCCAGGAGCTGATCACCACCCTGTACATTGGCTTTCTGGGCCTTATCTTCTCCTCC 888
Query 451 TACTTTGTGTACCTGGCTGAGAAGGACGCGGTGAACGAGTCAGGCCGCGTGGAGTTCGGCAGCTACGCAGATGC 524
||||||||.|||.||||||||||.||.||||||||||||||.||||||.|.|||||.|||||||||||||||||
Sbjct 889 TACTTTGTCTACTTGGCTGAGAAAGATGCGGTGAACGAGTCCGGCCGCATCGAGTTTGGCAGCTACGCAGATGC 962
Query 525 GCTGTGGTGGGGGGTGGTCACAGTCACCACCATCGGCTATGGGGACAAGGTGCCCCAGACGTGGGTCGGGAAGA 598
.||||||||||||||||||||||||||.|||||.|||||.|||||.|||||.||.|||||||||||.|||||||
Sbjct 963 TCTGTGGTGGGGGGTGGTCACAGTCACTACCATTGGCTACGGGGATAAGGTACCTCAGACGTGGGTTGGGAAGA 1036
Query 599 CCATCGCCTCCTGCTTCTCTGTCTTTGCCATCTCCTTCTTTGCGCTCCCAGCGGGGATTCTTGGCTCGGGGTTT 672
|||||||||||||.|||||||||||.|||||.|||||||||||.||||||||||||||.||||||||.|||||.
Sbjct 1037 CCATCGCCTCCTGTTTCTCTGTCTTCGCCATATCCTTCTTTGCACTCCCAGCGGGGATACTTGGCTCTGGGTTC 1110
Query 673 GCCCTGAAGGTGCAGCAGAAGCAGAGGCAGAAGCACTTCAACCGGCAGATCCCGGCGGCAGCCTCACTCATTCA 746
||.||||||||.|||||||||||||||||||||||||||||||||||||||||.||.||||||||||||||.||
Sbjct 1111 GCGCTGAAGGTCCAGCAGAAGCAGAGGCAGAAGCACTTCAACCGGCAGATCCCAGCTGCAGCCTCACTCATCCA 1184
Query 747 GACCGCATGGAGGTGCTATGCTGCCGAGAACCCCGACTCCTCCACCTGGAAGATCTACATCCGGAAGGCCCCCC 820
|||.|||||||||||||||||.||.||||||||.|||||..||||.|||||||||||..||||||||.|..|.|
Sbjct 1185 GACTGCATGGAGGTGCTATGCCGCTGAGAACCCTGACTCAGCCACTTGGAAGATCTATGTCCGGAAGCCTGCTC 1258
Query 821 GGAGCCACACTCTGCTGTCACCCAGCCCCAAACCCAAGAAGTCTGTGGTGGTAAAGAAAAAAAAGTTCAAGCTG 894
||||.|||||.||.|||||.||||||||||||||.||.||||||||..||||||||||.||.||||||||||||
Sbjct 1259 GGAGTCACACGCTTCTGTCCCCCAGCCCCAAACCTAAAAAGTCTGTCATGGTAAAGAAGAAGAAGTTCAAGCTG 1332
Query 895 GACAAAGACAATGGGGTGACTCCTGGAGAGAAGATGCTCACAGTCCCCCATATCACGTGCGACCCCCCAGAAGA 968
||.||.||.||||||.|||.||||||||||||||||.|||..||.||.||.|||||.|..||.||||||||.||
Sbjct 1333 GATAAGGATAATGGGATGAGTCCTGGAGAGAAGATGTTCAATGTTCCTCACATCACTTATGATCCCCCAGAGGA 1406
Query 969 GCGGCGGCTGGACCACTTCTCTGTCGACGGCTATGACAGTTCTGTAAGGAAGAGCCCAACACTGCTGGAAGTGA 1042
..||.|||..|||||.|||||..|.||.|||||||||||.||.||||||||||||||.||||||||||||||.|
Sbjct 1407 TAGGAGGCCAGACCATTTCTCCATTGATGGCTATGACAGCTCAGTAAGGAAGAGCCCTACACTGCTGGAAGTAA 1480
Query 1043 GCATGCCCCATTTCATGAGAACCAACAGCTTCGCCGAGGACCTGGACCTGGAAGGGGAGACTCTGCTGACACCC 1116
|||..|||||||||.|||||||.||||||||.||.||||||||||||||||||||||||||.||||||||.|||
Sbjct 1481 GCACACCCCATTTCTTGAGAACAAACAGCTTTGCAGAGGACCTGGACCTGGAAGGGGAGACACTGCTGACCCCC 1554
Query 1117 ATCACCCACATCTCACAGCTGCGGGAACACCATCGGGCCACCATTAAGGTCATTCGACGCATGCAGTACTTTGT 1190
||||||||..|.||||||||||||||.|||||||||||||||||.||||||||..|.|||||||||||||||||
Sbjct 1555 ATCACCCATGTGTCACAGCTGCGGGATCACCATCGGGCCACCATCAAGGTCATCAGGCGCATGCAGTACTTTGT 1628
Query 1191 GGCCAAGAAGAAATTCCAGCAAGCGCGGAAGCCTTACGATGTGCGGGACGTCATTGAGCAGTACTCGCAGGGCC 1264
.|||||||||||||||||||||||.||||||||.|||||.|||||.||.|||||.|||||||||||.|||||||
Sbjct 1629 AGCCAAGAAGAAATTCCAGCAAGCACGGAAGCCCTACGACGTGCGAGATGTCATCGAGCAGTACTCCCAGGGCC 1702
Query 1265 ACCTCAACCTCATGGTGCGCATCAAGGAGCTGCAGAGGAGGCTGGACCAGTCCATTGGGAAGCCCTCACTGTTC 1338
||||.|||||.|||||||||||.||.||.||.|||||.||||||||.|||||||||||||||||.||..|||||
Sbjct 1703 ACCTGAACCTTATGGTGCGCATTAAAGAACTACAGAGAAGGCTGGATCAGTCCATTGGGAAGCCATCTTTGTTC 1776
Query 1339 ATCTCCGTCTCAGAAAAGAGCAAGGATCGCGGCAGCAACACGATCGGCGCCCGCCTGAACCGAGTAGAAGACAA 1412
|||.||.|||| |
Sbjct 1777 ATCCCCATCTC--------------------------------------------------------------A 1788
Query 1413 GGTGACGCAGCTGGACCAGAGGCTGGCACTCATCACCGACATGCTTCACCAGCTGCTCTCCTTG---CACGGTG 1483
||||||.||.|||||||||||.||||...|||||||.||||||||.|||||||||||.|||.|| ||.||||
Sbjct 1789 GGTGACACAACTGGACCAGAGACTGGTGATCATCACAGACATGCTCCACCAGCTGCTGTCCATGCAACAAGGTG 1862
Query 1484 G--CAGCACCCCCGGCAGCGGCGGCCCCCCCAGAGAGGGCGGGGCCCACATCACCCAGCCCTGCGGCAGTGGCG 1555
| || |||..|..|||| ||| |||| .|||
Sbjct 1863 GTCCA--ACCTGCAACAGC----------------AGG------------TCAC------------AAGT---- 1890
Query 1556 GCTCCGTCGACCCTG-AGCTCTTCCTGCCCAGCAACACCCTGCCCACCTACGAGCAGCTGACCGTGCCCAGGAG 1628
|| || |||||||
Sbjct 1891 -------------TGTAG----------CCAGCAA--------------------------------------- 1902
Query 1629 GGGCCCCGATGAGGGGTCC 1647
Sbjct 1903 ------------------- 1902
