Nucleotide Global Alignment

Description

• Query: ccsbBroad304_00973
• Subject: XM_006532408.3
• Aligned Length: 1330
• Identities: 878
• Gaps: 314

Alignment

Query    1  ATGGCTGAGCCCCGCCAGGAGTTCGAAGTGATGGAAGATCACGCTGGGACGTACGGGTTGGGGGACAGGAAAGA  74
            ||||||||.||.|||||||||||.||....||||||||.||.|||||                        |||
Sbjct    1  ATGGCTGACCCTCGCCAGGAGTTTGACACAATGGAAGACCATGCTGG------------------------AGA  50

Query   75  TCAGGGGGGCTACACCATGCACCAAGACCAAGAGGGTGACACGGACGCTGGC----------------------  126
            |         |||||..|||.||||||||||||.||.||||.||||..||||                      
Sbjct   51  T---------TACACTCTGCTCCAAGACCAAGAAGGAGACATGGACCATGGCTTAAAAGAGTCTCCCCCACAGC  115

Query  127  ------------------------------------------------------------------CTGAA---  131
                                                                              |||||   
Sbjct  116  CCCCCGCCGATGATGGAGCGGAGGAACCAGGGTCGGAGACCTCCGATGCTAAGAGCACTCCAACTGCTGAAGAC  189

Query  132  --------------------------------------------------------------------------  131
                                                                                      
Sbjct  190  GTGACTGCGCCCCTAGTGGATGAGAGAGCTCCCGACAAGCAGGCCGCTGCCCAGCCCCACACGGAGATCCCAGA  263

Query  132  ---------AGCTGAAGAAGCAGGCATTGGAGACACCCCCAGCCTGGAAGACGAAGCTGCTGGTCACGTGACCC  196
                     |||.||||||||||||||.|||||||||||.|.||.|||.|||.||||.|||||.||.|||||.|
Sbjct  264  AGGAATTACAGCCGAAGAAGCAGGCATCGGAGACACCCCGAACCAGGAGGACCAAGCCGCTGGGCATGTGACTC  337

Query  197  AAGCTCGCATGGTCAGTAAAAGCAAAGACGGGACTGGAAGCGATGACAAAAAAGCCAAGGGGGCTGATGGTAAA  270
            |||||||..|||.|      |||||||||.||||.||||..||.||.||.|||||||||||.||||||||.|||
Sbjct  338  AAGCTCGTGTGGCC------AGCAAAGACAGGACAGGAAATGACGAGAAGAAAGCCAAGGGCGCTGATGGCAAA  405

Query  271  A------CGAAGATCGCCACACCGCGGGGAGCAGCCCCTCCAGGCCAGAAGGGCCAGGCCAACGCCACCAGGAT  338
            |      ||||||||||||||||.||||||||||||.||||.|.||||||||||..|.||||||||||||||||
Sbjct  406  ACCGGGGCGAAGATCGCCACACCTCGGGGAGCAGCCTCTCCGGCCCAGAAGGGCACGTCCAACGCCACCAGGAT  479

Query  339  TCCAGCAAAAACCCCGCCC-GCTCCAAAGACACCACCCAGCTCTGGTGAACCTCCAAAATCAGGGGATCGCAGC  411
            .||.||.||.|||.||||| || ||.|||||.||.||..|.||.||||||||.||||||||.||.||.||.|||
Sbjct  480  CCCGGCCAAGACCACGCCCAGC-CCTAAGACTCCTCCAGGGTCAGGTGAACCACCAAAATCCGGAGAACGAAGC  552

Query  412  GGCTACAGCAGCCCCGGCTCCCCAGGCACTCCCGGCAGCCGCTCCCGCACCCCGTCCCTTCCAACCCCACCCAC  485
            ||||||||||||||||||||.||.||.||.||.|||||.|||||.||||||||.|||||.|||||.||.|||||
Sbjct  553  GGCTACAGCAGCCCCGGCTCTCCCGGAACGCCTGGCAGTCGCTCGCGCACCCCATCCCTACCAACACCGCCCAC  626

Query  486  CCGGGAGCCCAAGAAGGTGGCAGTGGTCCGTACTCCACCCAAGTCGCCGTCTTCCGCCAAGAGCCGCCTGCAGA  559
            ||||||||||||||||||||||||||||||.|||||.||.|||||.||.||..|....||||||||||||||||
Sbjct  627  CCGGGAGCCCAAGAAGGTGGCAGTGGTCCGCACTCCCCCTAAGTCACCATCAGCTAGTAAGAGCCGCCTGCAGA  700

Query  560  CAGCCCCCGTGCCCATGCCAGACCTGAAGAATGTCAAGTCCAAGATCGGCTCCACTGAGAACCTGAAGCACCAG  633
            |.|||||.|||||||||||||||||.||||||||||.|||.|||||.|||||.|||||||||||||||||||||
Sbjct  701  CTGCCCCTGTGCCCATGCCAGACCTAAAGAATGTCAGGTCGAAGATTGGCTCTACTGAGAACCTGAAGCACCAG  774

Query  634  CCGGGAGGCGGGAAGGTGCAGATAATTAATAAGAAGCTGGATCTTAGCAACGTCCAGTCCAAGTGTGGCTCAAA  707
            ||.|||||.||.|||                                                           
Sbjct  775  CCAGGAGGTGGCAAG-----------------------------------------------------------  789

Query  708  GGATAATATCAAACACGTCCCGGGAGGCGGCAGTGTGCAAATAGTCTACAAACCAGTTGACCTGAGCAAGGTGA  781
                                              |||||||||||||||||.||.||.|||||||||||.||||
Sbjct  790  ----------------------------------GTGCAAATAGTCTACAAGCCGGTGGACCTGAGCAAAGTGA  829

Query  782  CCTCCAAGTGTGGCTCATTAGGCAACATCCATCATAAACCAGGAGGTGGCCAGGTGGAAGTAAAATCTGAGAAG  855
            ||||||||||||||||.|||||.|||||||||||.||.|||||||||||||||||||||||||||||.||||||
Sbjct  830  CCTCCAAGTGTGGCTCGTTAGGGAACATCCATCACAAGCCAGGAGGTGGCCAGGTGGAAGTAAAATCAGAGAAG  903

Query  856  CTTGACTTCAAGGACAGAGTCCAGTCGAAGATTGGGTCCCTGGACAATATCACCCACGTCCCTGGCGGAGGAAA  929
            ||.||||||||||||||||||||||||||||||||.|||.||||.||||||||||||||||||||.|||||.||
Sbjct  904  CTGGACTTCAAGGACAGAGTCCAGTCGAAGATTGGCTCCTTGGATAATATCACCCACGTCCCTGGAGGAGGGAA  977

Query  930  TAAAAAGATTGAAACCCACAAGCTGACCTTCCGCGAGAACGCCAAAGCCAAGACAGACCACGGGGCGGAGATCG  1003
            |||.|||||||||||||||||||||||||||.|.|||||.||||||||||||||||||||.||.||.||.||.|
Sbjct  978  TAAGAAGATTGAAACCCACAAGCTGACCTTCAGGGAGAATGCCAAAGCCAAGACAGACCATGGAGCAGAAATTG  1051

Query 1004  TGTACAAGTCGCCAGTGGTGTCTGGGGACACGTCTCCACGGCATCTCAGCAATGTCTCCTCCACCGGCAGCATC  1077
            ||||.|||||.||.|||||||||||||||||.|||||||||||.|||||||||||.||.|||||.|||||||||
Sbjct 1052  TGTATAAGTCACCCGTGGTGTCTGGGGACACATCTCCACGGCACCTCAGCAATGTGTCTTCCACGGGCAGCATC  1125

Query 1078  GACATGGTAGACTCGCCCCAGCTCGCCACGCTAGCTGACGAGGTGTCTGCCTCCCTGGCCAAGCAGGGTTTG  1149
            ||||||||.|||||.||.|||||.|||||.|||||.||.||.||||||||.|||.|||||||||||||||||
Sbjct 1126  GACATGGTGGACTCACCACAGCTTGCCACACTAGCCGATGAAGTGTCTGCTTCCTTGGCCAAGCAGGGTTTG  1197