Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_00977
- Subject:
- XR_002957553.1
- Aligned Length:
- 2654
- Identities:
- 227
- Gaps:
- 2409
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TTGATCCGGTGCTGCAGTGAGGAGGTGGTTCTTGCCCGTGTTGTGTGTGTGTGTGAGTGAGAGAGCGAGTGAGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GAGTGAGTGAGTGTGTGTGTGGGGGGGACTCGGCTTGTTGTTGTCGGTGACTTCCCCCTCCCCTTCACCCCTTC 148
Query 1 ---------------------------------------------ATGAGCGATAACGATGACATCGAGGTGGA 29
|||||||||||||||||||||||||||||
Sbjct 149 CCCTCCCCGCCGCCGCTGCAGTGGCCGCTCCCTGGGCCGTAGGAAATGAGCGATAACGATGACATCGAGGTGGA 222
Query 30 GAGCGACGAAGAGCAACCGAGGTTTCAATCTGCGGCTGACAAACGGGCTCATCATAATGCACTGGAACGAAAAC 103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GAGCGACGAAGAGCAACCGAGGTTTCAATCTGCGGCTGACAAACGGGCTCATCATAATGCACTGGAACGAAAAC 296
Query 104 GTAGGGACCACATCAAAGACAGCTTTCACAGTTTGCGGGACTCAGTCCCATCACTCCAAGGAGAGAAGCTCTAT 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GTAGGGACCACATCAAAGACAGCTTTCACAGTTTGCGGGACTCAGTCCCATCACTCCAAGGAGAGAAG------ 364
Query 178 TTCCTCTTTTGGAAATTGTGTACTCCTGTCC---TTCATCGTCAAAG--------TTTGATGCAG-AAATGC-- 237
|.|..||.|.|| .||.|.|.||||| |.| ||.||| |.||||
Sbjct 365 -------------------GCATCCCGGGCCCAAATCCTAGACAAAGCCACAGAATAT-ATCCAGTATATGCGA 418
Query 238 -------------CACACCTTC-----ATT-------TCAAGCTACCAAGTGCACAAGAAAAAAGAAT------ 280
||||||..| ||| ||||||..| |||||
Sbjct 419 AGGAAAAACCACACACACCAGCAAGATATTGACGACCTCAAGCGGC-----------------AGAATGCTCTT 475
Query 281 --------GCAAGATT---------------------------------------------------------- 288
|||||.|.
Sbjct 476 CTGGAGCAGCAAGGTGAGCACCCGAGCTCGTGGGGCAGCTGGCCCTGCTGTGCTCCAGCCAGGTCAGGCTTTGG 549
Query 289 -------------------------------------------------------------------------- 288
Sbjct 550 CACCTGGGCCTGCAGAGTCAGAGCCAGTCATGGAGTATGTGCTCAGTAGCAGGCTTGGTCCTGCTTCTTGGGGC 623
Query 289 -------------------------------------------------------------------------- 288
Sbjct 624 CTGAGTAACTGAGTGTTAGAGCCGTCCTGAGGAAGGACCTGAGGCGCCAGTGAGGAGACAGTGGAAGCTAGGAA 697
Query 289 -------------------------------------------------------------------------- 288
Sbjct 698 GTTGGACATCTGGAGACTTGTATCTTTTCTGGCCTGACCTCTCCCCTTCTTGGGGCTCAGGTGCTCTGCCTGCA 771
Query 289 -------------------------------------------------------------------------- 288
Sbjct 772 GTAGGGATCACACCTGGCATCAGGTGTCTGAAAAGAGCTTTGAGGTCCTTGGAGTGGAATGTGCTGTGTAAGTA 845
Query 289 -------------------------------------------------------------------------- 288
Sbjct 846 CCAGAGACTCCAGGTGTTCAGGGACAGTGAGCCCTCCCCATTGTCAATGGTAGTCCAATCAGGGCAGCCTATGG 919
Query 289 -------------------------------------------------------------------------- 288
Sbjct 920 GCTAGGCCCATGCTGTTCTCAATGCTCACACCCGCCTTTTCCTACAACCACAGGGGAAAGCGAGAGCTGATCAA 993
Query 289 -------------------------------------------------------------------------- 288
Sbjct 994 GTTCTTTGTTCCTGGGGAATTCACTTCTCTTCCTCCCTCATGGAAGATGCAAGTAAAAGGAAATGCAAGTAACC 1067
Query 289 -------------------------------------------------------------------------- 288
Sbjct 1068 ACCTGGTCCGTGCACTGGAGAAGGCGAGGTCAAGTGCCCAACTGCAGACCAACTACCCCTCCTCAGACAACAGC 1141
Query 289 -------------------------------------------------------------------------- 288
Sbjct 1142 CTCTACACCAACGCCAAGGGCAGCACCATCTCTGCCTTCGATGGGGGCTCGGACTCCAGCTCGGAGTCTGAGCC 1215
Query 289 -------------------------------------------------------------------------- 288
Sbjct 1216 TGAAGAGCCCCAAAGCAGGAAGAAGCTCCGGATGGAGGCCAGCTAAGCCACTCGGGGCAGGCCAGCAATAAAAA 1289
Query 289 -------------------------------------------------------------------------- 288
Sbjct 1290 CTGTCTGTCTCCATCGTCTCATCCTCCTTTCAGTTCGTTGGTAGAGCCCTCAGAACCATTTAAGAGACTCTTTA 1363
Query 289 -------------------------------------------------------------------------- 288
Sbjct 1364 TTTTTCTCTTTCTCCCTTTTTTTTTTAAATTTTTATTTTTACGTAGAAGCTCTTGGACAACAGCTCTCGTTCTC 1437
Query 289 -------------------------------------------------------------------------- 288
Sbjct 1438 CTTCCCCATTTCCACTGTATATTTTTTAATGTATTCCCTTCAGGGATTCCCTGTCCCCAACAGGAATTTTTAAA 1511
Query 289 -------------------------------------------------------------------------- 288
Sbjct 1512 CCAAAACACCCCAACTTGGCAGCTTTTTCTGTGGAGGACAGACGGCCGGCCGGACCTCTGAGCACATAGTGTCC 1585
Query 289 -------------------------------------------------------------------------- 288
Sbjct 1586 TGCCCACCCTACCAGCTCCTCCAGCCCTGCCGGGCACATGCCCGGGGGACGCCTGCCCTGCCCAGGTGGCCTCC 1659
Query 289 -------------------------------------------------------------------------- 288
Sbjct 1660 TGGCCCGCCCTCACCTCTGATAGACTTTGTGAATCTGAACTGCTCTACTTTGAGAAGATGACCGGTTTGGAGTA 1733
Query 289 -------------------------------------------------------------------------- 288
Sbjct 1734 ATCAGAATGAACCCTCCTCCTTTTTAAGGGTTTTTTTTTTTTCCTTTTTCTAAAAAGCTATGTATCGCTCCTAT 1807
Query 289 -------------------------------------------------------------------------- 288
Sbjct 1808 TGAAAGACCAGATCCTTAGAGAAGTTTGTGGTATAAAAAGGAAGTGGGGACAGATTCGCAGCACAGAGTCGCTG 1881
Query 289 -------------------------------------------------------------------------- 288
Sbjct 1882 GCATGTTTCACTCCTGCTTCTCTCAGCCAGCTGTTTAAGCCTGCGGCGCCAGCCTCACGGAGGGCCGTGTGACA 1955
Query 289 -------------------------------------------------------------------------- 288
Sbjct 1956 CTCTCGTGGTATGTATGGGAGATGGCAGCAGTGAAGCAGCAGCCACCAGGGAGTGGCCATTTGGGGTTGGGACA 2029
Query 289 -------------------------------------------------------------------------- 288
Sbjct 2030 GGGAGGGTGTTTTGGGTGGCATAGAGGTTTTGTATTGAGGGCCAGTGATGATGTTTTGATATTTATTTCCTGCT 2103
Query 289 -------------------------------------------------------------------------- 288
Sbjct 2104 ACTTAAATTTGAATCTGAGTGAATTGTACCTATTTCTGATGATGTCGGTCTTGCAAAGCGACAGATTCATAAAG 2177
Query 289 -------------------------------------------------------------------------- 288
Sbjct 2178 TAATGATGAAATCTTTCTTTCTTCCCGTGTGTATTTCTAAGAAATAGAGCCAACTGATTTTGTATGTAAATACC 2251
Query 289 -------------------------------------------------------------------------- 288
Sbjct 2252 AAGAGCAATTTACCTGGTACTAAACCCGCACCCCAGTGCGGACCCTTCCCAGCCCTCATCCCACTTCCTTTCCT 2325
Query 289 -------------------------------------------------------------------------- 288
Sbjct 2326 ACTGTCCTGGAACCTGTCTCCATTGTGTGATCCAGCCCTGGTTCTGGCTGTGGTCAGCAGATGCCAGTGAAGGG 2399
Query 289 -------------------------------------------------------------------------- 288
Sbjct 2400 TTTTGTGTGTTTAGGCCTCATTTCTTTGTCTTTTTCCTACTCCGTTCCTGGCATTTGCTGATTTCTAGTGTATA 2473
Query 289 -------------------------------------------------------------------------- 288
Sbjct 2474 CTCTGTAGTCTCAGTTCGTGTTTGATTCCATTCCATGGAAATAAAAAGTATGTTGTACATACTGCCGAAGAATT 2547
Query 289 ---------------------------------------------------------------- 288
Sbjct 2548 GTCTTGCAAGTTAAGGCTTCCCCCTTTACTATAAGACTATAAATAAAAACTTATTTTATCCTTC 2611
