Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_00977
- Subject:
- XR_943450.3
- Aligned Length:
- 2207
- Identities:
- 263
- Gaps:
- 1925
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTGCCGCCGTTGATCCGGTGCTGCAGTGAGGAGGTGGTTCTTGCCCGTGTTGTGTGTGTGTGTGAGTGAGAGAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGAGTGAGTGAGTGAGTGAGTGTGTGTGTGGGGGGGACTCGGCTTGTTGTTGTCGGTGACTTCCCCCTCCCCTT 148
Query 1 ------------------------------------------------------ATGAGCGATAACGATGACAT 20
||||||||||||||||||||
Sbjct 149 CACCCCTTCCCCTCCCCGCCGCCGCTGCAGTGGCCGCTCCCTGGGCCGTAGGAAATGAGCGATAACGATGACAT 222
Query 21 CGAGGTGGAGAGCGACGAAGAGCAACCGAGGTTTCAATCTGCGGCTGACAAACGGGCTCATCATAATGCACTGG 94
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CGAGGTGGAGAGCGACGAAGAGCAACCGAGGTTTCAATCTGCGGCTGACAAACGGGCTCATCATAATGCACTGG 296
Query 95 AACGAAAACGTAGGGACCACATCAAAGACAGCTTTCACAGTTTGCGGGACTCAGTCCCATCACTCCAAGGAGAG 168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AACGAAAACGTAGGGACCACATCAAAGACAGCTTTCACAGTTTGCGGGACTCAGTCCCATCACTCCAAGGAGAG 370
Query 169 AAG------------------CT--------------------------------------------------- 173
||| ||
Sbjct 371 AAGGCATCCCGGGCCCAAATCCTAGACAAAGCCACAGAATATATCCAGTATATGCGAAGGAAAAACCACACACA 444
Query 174 --------CTATT--------------------TCCTCTTTTGGA-----AATTGTGTACT-CCTG-------- 205
.|||| |.|||||.|||| || .|||..|| ||||
Sbjct 445 CCAGCAAGATATTGACGACCTCAAGCGGCAGAATGCTCTTCTGGAGCAGCAA-GGTGCTCTGCCTGCAGTAGGG 517
Query 206 -----TCCT-TCATC----GTC---AAAG---TTTGA------------------TGC----AGAAATGCCACA 241
.||| .|||| ||| |||| ||||| ||| .|||| ||.|.|
Sbjct 518 ATCACACCTGGCATCAGGTGTCTGAAAAGAGCTTTGAGGTCCTTGGAGTGGAATGTGCTGTGGGAAA-GCGAGA 590
Query 242 CC--------------------------TTCATTTCAAGCTACC----------AAG-TGCACAAGAAAAAAGA 278
.| ||||.||| .||.|| ||| || ||||.||||.||
Sbjct 591 GCTGATCAAGTTCTTTGTTCCTGGGGAATTCACTTC--TCTTCCTCCCTCATGGAAGATG--CAAGTAAAAGGA 660
Query 279 A------TGCA----AGATT------------------------------------------------------ 288
| |||| |||..
Sbjct 661 AATTCCGTGCACTGGAGAAGGCGAGGTCAAGTGCCCAACTGCAGACCAACTACCCCTCCTCAGACAACAGCCTC 734
Query 289 -------------------------------------------------------------------------- 288
Sbjct 735 TACACCAACGCCAAGGGCAGCACCATCTCTGCCTTCGATGGGGGCTCGGACTCCAGCTCGGAGTCTGAGCCTGA 808
Query 289 -------------------------------------------------------------------------- 288
Sbjct 809 AGAGCCCCAAAGCAGGAAGAAGCTCCGGATGGAGGCCAGCTAAGCCACTCGGGGCAGGCCAGCAATAAAAACTG 882
Query 289 -------------------------------------------------------------------------- 288
Sbjct 883 TCTGTCTCCATCGTCTCATCCTCCTTTCAGTTCGTTGGTAGAGCCCTCAGAACCATTTAAGAGACTCTTTATTT 956
Query 289 -------------------------------------------------------------------------- 288
Sbjct 957 TTCTCTTTCTCCCTTTTTTTTTTAAATTTTTATTTTTACGTAGAAGCTCTTGGACAACAGCTCTCGTTCTCCTT 1030
Query 289 -------------------------------------------------------------------------- 288
Sbjct 1031 CCCCATTTCCACTGTATATTTTTTAATGTATTCCCTTCAGGGATTCCCTGTCCCCAACAGGAATTTTTAAACCA 1104
Query 289 -------------------------------------------------------------------------- 288
Sbjct 1105 AAACACCCCAACTTGGCAGCTTTTTCTGTGGAGGACAGACGGCCGGCCGGACCTCTGAGCACATAGTGTCCTGC 1178
Query 289 -------------------------------------------------------------------------- 288
Sbjct 1179 CCACCCTACCAGCTCCTCCAGCCCTGCCGGGCACATGCCCGGGGGACGCCTGCCCTGCCCAGGTGGCCTCCTGG 1252
Query 289 -------------------------------------------------------------------------- 288
Sbjct 1253 CCCGCCCTCACCTCTGATAGACTTTGTGAATCTGAACTGCTCTACTTTGAGAAGATGACCGGTTTGGAGTAATC 1326
Query 289 -------------------------------------------------------------------------- 288
Sbjct 1327 AGAATGAACCCTCCTCCTTTTTAAGGGTTTTTTTTTTTTCCTTTTTCTAAAAAGCTATGTATCGCTCCTATTGA 1400
Query 289 -------------------------------------------------------------------------- 288
Sbjct 1401 AAGACCAGATCCTTAGAGAAGTTTGTGGTATAAAAAGGAAGTGGGGACAGATTCGCAGCACAGAGTCGCTGGCA 1474
Query 289 -------------------------------------------------------------------------- 288
Sbjct 1475 TGTTTCACTCCTGCTTCTCTCAGCCAGCTGTTTAAGCCTGCGGCGCCAGCCTCACGGAGGGCCGTGTGACACTC 1548
Query 289 -------------------------------------------------------------------------- 288
Sbjct 1549 TCGTGGTATGTATGGGAGATGGCAGCAGTGAAGCAGCAGCCACCAGGGAGTGGCCATTTGGGGTTGGGACAGGG 1622
Query 289 -------------------------------------------------------------------------- 288
Sbjct 1623 AGGGTGTTTTGGGTGGCATAGAGGTTTTGTATTGAGGGCCAGTGATGATGTTTTGATATTTATTTCCTGCTACT 1696
Query 289 -------------------------------------------------------------------------- 288
Sbjct 1697 TAAATTTGAATCTGAGTGAATTGTACCTATTTCTGATGATGTCGGTCTTGCAAAGCGACAGATTCATAAAGTAA 1770
Query 289 -------------------------------------------------------------------------- 288
Sbjct 1771 TGATGAAATCTTTCTTTCTTCCCGTGTGTATTTCTAAGAAATAGAGCCAACTGATTTTGTATGTAAATACCAAG 1844
Query 289 -------------------------------------------------------------------------- 288
Sbjct 1845 AGCAATTTACCTGGTACTAAACCCGCACCCCAGTGCGGACCCTTCCCAGCCCTCATCCCACTTCCTTTCCTACT 1918
Query 289 -------------------------------------------------------------------------- 288
Sbjct 1919 GTCCTGGAACCTGTCTCCATTGTGTGATCCAGCCCTGGTTCTGGCTGTGGTCAGCAGATGCCAGTGAAGGGTTT 1992
Query 289 -------------------------------------------------------------------------- 288
Sbjct 1993 TGTGTGTTTAGGCCTCATTTCTTTGTCTTTTTCCTACTCCGTTCCTGGCATTTGCTGATTTCTAGTGTATACTC 2066
Query 289 -------------------------------------------------------------------------- 288
Sbjct 2067 TGTAGTCTCAGTTCGTGTTTGATTCCATTCCATGGAAATAAAAAGTATGTTGTACATACTGCCGAAGAATTGTC 2140
Query 289 ------------------------------------------------------------- 288
Sbjct 2141 TTGCAAGTTAAGGCTTCCCCCTTTACTATAAGACTATAAATAAAAACTTATTTTATCCTTC 2201
