Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_01151
- Subject:
- NM_033579.1
- Aligned Length:
- 2789
- Identities:
- 360
- Gaps:
- 2389
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGGAGGGAGCAGCGCGCGGAGGAAGCGCCCCGGCCGCCCGCAGGTACTGTTTATCCTGCTGCTGCCTTTGTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTGTCCCGCGCTGGGCCAGCCGGTCCGCTACTCCATCCCTGAGGAGCTGGACCGCGGGTCGGTGGTGGGGAAGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCGCCAAGGACCTGGGGCTCAGTGTCCTGGAAGTGTCGGCTCGGAAGCTGCGGGTCAGCGCTGAGAAGCTGCAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TTCAGCGTGGATTCGGAGAGCGGGGACTTACTGGTGAAGGACCGCATAGATCGCGAGCAAATATGCAAAGGGAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GAGAAAGTGTGAGCTGCAGTTGGAAGCTGTGCTAGAAAACCCTTTAAATATTTTTCATGTCGTTGTGGAGATTG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGGATGTTAATGATCACGCTCCTCAATTTCCAAAAGACGAAATAAACCTAGAGATAAGTGAATCCGACAGCCCA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGGGCGAGAACAATTCTGGAGTCAGCAAAAGATCTTGACATTGGTATGAATTCTCTAAGTAAATACCAGTTAAG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TCCTAACGACTACTTTTTATTGTTGGTGAAAGACAATCCTGATGGTAGTAAATACCCAGAATTAGAATTGCAAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AGATGCTGGACCGAGAAGCAGAGAGCACACACCACCTGATGCTGACTGCTGTAGATGGTGGGGACCCGCCCCGT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ACTGGTACTACTCAGCTCCGAATCCGAGTGGTGGACGCCAATGATAACCGCCCAGTGTTCAGCCAAGACGTGTA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CAGAGTCCGCCTTCCAGAAGACTTGCCTCCAGGAACCACAGTCCTAAGGCTAAAGGCAATGGATCAAGACGAGG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GCATCAATGCAGAATTTACATATTCCTTCCTAGGTGTGGCTAACAAAGCCCAGTTCTCTCTGGATCCCATAACA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GGAGATATTGTAACTCGCCAGTCGTTGGATTTTGAAGAAGTAGAGCAATATACGATTGATGTGGAGGCAAAGGA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CCGAGGATCTCTTTCTTCACAGTGTAAAGTAATTATAGAGGTTCTAGATGAGAACGACAACCGCCCAGAAATAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TCATCACTTCTCTCTCTGATCAGATTTCGGAGGATTCTCCTTCCGGAACTGTTGTGGCCCTCTTCAAGGTACGG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GATCGAGATTCTGGGGAAAACGCAGAAGTCATGTGCAGTTTAAGCGGAAACAATCCATTTAAGATTCATTCTTC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TTCCAACAATTACTACAAGTTAGTAACAGATAGCATCCTAGACCGGGAACAGACCCCAGGGTACAACGTTACTA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TCACAGCCACTGATAGGGGCAAGCCGCCCCTTTCCTCCAGCACAACCATCACTCTGAACGTCGCTGATGTCAAC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GACAATGCACCTGTTTTCCAACAGCAGGCCTACCTGATAAACGTAGCAGAAAACAACCAGCCCGGTACCTCCAT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AACCCAAGTCAAAGCATGGGATCCAGATGTGGGATCCAATGGCCTCGTCTCCTACTCCATCATAGCCAGCGACC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TAGAACCAAAAGCGCTGTCGTCCTTCGTGTCCGTGAACCAGGACAGTGGAGTAGTGTACGCGCAGCGTGCCTTT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GACCATGAGCAGATTCGCTCCTTCCAGCTGACTTTACAAGCGCGAGACCAGGGGTCGCCTGCGCTCAGCGCCAA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CGTGAGCATGCGCGTGCTGGTGGACGACCGCAACGACAACGCGCCACGCGTGCTGTATCCCACGCTGGAGCCCG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 ATGGCTCTGCACTCTTCGACATGGTACCCCGTGCCGCTGAGCCTGGATACCTGGTCACCAAAGTGGTGGCTGTG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GATGCAGACTCAGGACACAATGCCTGGCTGTCTTACCACGTGCTGCAGGCCAGCGATCCCGGTCTCTTCAGCCT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GGGGCTGCGCACGGGCGAGGTGCGCACAGCGCGTGCCTTGAGCGACAAGGATGCAGCTCGTCAGCGCCTTCTGG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TCGCTGTGCGTGATGGTGGACAGCCACCTCTGTCTGCCACTGCTACACTGCTCCTAGTTTTTGCAGACAGCCTA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CAAGAAGCGTTGCCAGACCTCGTCGATCATCCCATCCCCTCCGACCCTCAGAGTGAGCTTCAGTTTTACCTGGT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GGTGGCTTTGGCCTTGATCTCAGTGCTTTTCCTTCTCGCAGTAATTTTCGCCATTGCTTTGCGCCTGCGACAGT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CTTCCAGCCCTTCATCCACTGGTTGCTTTGGGTCGGTTCTTGGTTCCAAATCTAGACCAGTACTTCCACCCAAC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TACAGCGAGGGAACATTGCCCTATGCCTATAATCTGTGCGTGCCGGGAGATCAACTTAAACCAGAATTTAATTA 2294
Query 1 -------------------------------------------------------------------ATGGTCC 7
.||| |
Sbjct 2295 CTTCTCATCCGTTGGAGATTGTCCAGCCGCACAAGATATTCTCAACAAAGATAGCTCCTCGGCACTGTTGG--C 2366
Query 8 CAG-------AGGCCTGG---AGGAGCGGA----------------CTGCAAGCCCCGCCCAACACGGACTGGC 55
.|| |..||||| .|.|||.|| |.||||||||||||||||||.|||||||
Sbjct 2367 TAGTATTTTAACTCCTGGTGTTGAAGCAGACGAGAAGACCTTTAACCAGCAAGCCCCGCCCAACACTGACTGGC 2440
Query 56 GTTTCTCTCAGGCCCAGAGACCCGGCACCAGCGGCTCCCAAAATGGCGATGACACCGGCACCTGGCCCAACAAC 129
||||||||||.|||||||||||||||||.|||||.|||||||||||.|||||.||.||||||||||||||||||
Sbjct 2441 GTTTCTCTCAAGCCCAGAGACCCGGCACGAGCGGATCCCAAAATGGTGATGAAACTGGCACCTGGCCCAACAAC 2514
Query 130 CAGTTTGACACAGAGATGCTGCAAGCCATGATCTTGGCGTCCGCCAGTGAAGCTGCTGATGGGAGCTCCACCCT 203
||||||||.|||||||||||||||||||||||||||||.||.|||||.||||||||||||||||||||.|||||
Sbjct 2515 CAGTTTGATACAGAGATGCTGCAAGCCATGATCTTGGCCTCTGCCAGCGAAGCTGCTGATGGGAGCTCTACCCT 2588
Query 204 GGGAGGGGGTGCCGGCACCATGGGATTGAGCGCCCGCTACGGACCCCAGTTCACCCTGCAGCACGTGCCCGACT 277
|||||||||.||.|||||||||||..|||||||.||.||||||||||||||.|||||||||||||||||.||||
Sbjct 2589 GGGAGGGGGCGCTGGCACCATGGGTCTGAGCGCTCGATACGGACCCCAGTTTACCCTGCAGCACGTGCCTGACT 2662
Query 278 ACCGCCAGAATGTCTACATCCCAGGCAGCAATGCCACACTGACCAACGCAGCTGGCAAGCGGGATGGCAAGGCC 351
||||||||||.||.||||||||.||||||||||||||.||||||||.||.||||||||.||.|||||||||||.
Sbjct 2663 ACCGCCAGAACGTGTACATCCCTGGCAGCAATGCCACGCTGACCAATGCCGCTGGCAAACGAGATGGCAAGGCT 2736
Query 352 CCAGCAGGTGGCAATGGCAACAAGAAGAAGTCGGGCAAGAAGGAGAAGAAG 402
|||||||||||.|||||||||||||||||.|||||||||||.|||||||||
Sbjct 2737 CCAGCAGGTGGTAATGGCAACAAGAAGAAATCGGGCAAGAAAGAGAAGAAG 2787
