Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_01168
- Subject:
- XM_017023273.2
- Aligned Length:
- 1727
- Identities:
- 1239
- Gaps:
- 469
Alignment
Query 1 ATGGCCAGGACCACCAGCCAGCTGTATGACGCCGTGCCCATCCAGTCCAGCGTGGTGTTATGTTCCTGCCCATC 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGCCAGGACCACCAGCCAGCTGTATGACGCCGTGCCCATCCAGTCCAGCGTGGTGTTATGTTCCTGCCCATC 74
Query 75 CCCATCAATGGTGAGGACCCAGACTGAGTCCAGCACGCCCCCTGGCATTCCTGGTGGCAGCAGGCAGGGCCCCG 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CCCATCAATGGTGAGGACCCAGACTGAGTCCAGCACGCCCCCTGGCATTCCTGGTGGCAGCAGGCAGGGCCCCG 148
Query 149 CCATGGACGGCACTGCAGCCGAGCCTCGGCCCGGCGCCGGCTCCCTGCAGCATGCCCAGCCTCCGCCGCAGCCT 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CCATGGACGGCACTGCAGCCGAGCCTCGGCCCGGCGCCGGCTCCCTGCAGCATGCCCAGCCTCCGCCGCAGCCT 222
Query 223 CGGAAGAAGCGGCCTGAGGACTTCAAGTTTGGGAAAATCCTTGGGGAAGGCTCTTTTTCCACGGTTGTCCTGGC 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CGGAAGAAGCGGCCTGAGGACTTCAAGTTTGGGAAAATCCTTGGGGAAGGCTCTTTTTCCACGGTTGTCCTGGC 296
Query 297 TCGAGAACTGGCAACCTCCAGAGAATATGCGA------------------------------------------ 328
||||||||||||||||||||||||||||||||
Sbjct 297 TCGAGAACTGGCAACCTCCAGAGAATATGCGATTAAAATTCTGGAGAAGCGACATATCATAAAAGAGAACAAGG 370
Query 329 -------------------------------------------------------------------------- 328
Sbjct 371 TCCCCTATGTAACCAGAGAGCGGGATGTCATGTCGCGCCTGGATCACCCCTTCTTTGTTAAGCTTTACTTCACA 444
Query 329 -------------------------------------------------------------------------- 328
Sbjct 445 TTTCAGGACGACGAGAAGCTGTATTTCGGCCTTAGTTATGCCAAAAATGGAGAACTACTTAAATATATTCGCAA 518
Query 329 -------------------------------------------------------------------------- 328
Sbjct 519 AATCGGTTCATTCGATGAGACCTGTACCCGATTTTACACGGCTGAGATTGTGTCTGCTTTAGAGTACTTGCACG 592
Query 329 -------------------------------------------------------------------------- 328
Sbjct 593 GCAAGGGCATCATTCACAGGGACCTTAAACCGGAAAACATTTTGTTAAATGAAGATATGCACATCCAGATCACA 666
Query 329 -------------------------------------------CCAGGGCCAACTCATTCGTGGGAACAGCGCA 359
|||||||||||||||||||||||||||||||
Sbjct 667 GATTTTGGAACAGCAAAAGTCTTATCCCCAGAGAGCAAACAAGCCAGGGCCAACTCATTCGTGGGAACAGCGCA 740
Query 360 GTACGTTTCTCCAGAGCTGCTCACGGAGAAGTCCGCCTGTAAGAGTTCAGACCTTTGGGCTCTTGGATGCATAA 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GTACGTTTCTCCAGAGCTGCTCACGGAGAAGTCCGCCTGTAAGAGTTCAGACCTTTGGGCTCTTGGATGCATAA 814
Query 434 TATACCAGCTTGTGGCAGGACTCCCACCATTCCGAGCTGGAAACGAGTATCTTATATTTCAGAAGATCATTAAG 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TATACCAGCTTGTGGCAGGACTCCCACCATTCCGAGCTGGAAACGAGTATCTTATATTTCAGAAGATCATTAAG 888
Query 508 TTGGAATATGACTTTCCAGAAAAATTCTTCCCTAAGGCAAGAGACCTCGTGGAGAAACTTTTGGTTTTAGATGC 581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TTGGAATATGACTTTCCAGAAAAATTCTTCCCTAAGGCAAGAGACCTCGTGGAGAAACTTTTGGTTTTAGATGC 962
Query 582 CACAAAGCGGTTAGGCTGTGAGGAAATGGAAGGATACGGACCTCTTAAAGCACACCCGTTCTTCGAGTCCGTCA 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CACAAAGCGGTTAGGCTGTGAGGAAATGGAAGGATACGGACCTCTTAAAGCACACCCGTTCTTCGAGTCCGTCA 1036
Query 656 CGTGGGAGAACCTGCACCAGCAGACGCCTCCGAAGCTCACCGCTTACCTGCCGGCTATGTCGGAAGACGACGAG 729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CGTGGGAGAACCTGCACCAGCAGACGCCTCCGAAGCTCACCGCTTACCTGCCGGCTATGTCGGAAGACGACGAG 1110
Query 730 GACTGCTATGGCAATTATGACAATCTCCTGAGCCAGTTTGGCTGCATGCAGGTGTCTTCGTCCTCCTCCTCACA 803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GACTGCTATGGCAATTATGACAATCTCCTGAGCCAGTTTGGCTGCATGCAGGTGTCTTCGTCCTCCTCCTCACA 1184
Query 804 CTCCCTGTCAGCCTCCGACACGGGCCTGCCCCAGAGGTCAGGCAGCAACATAGAGCAGTACATTCACGATCTGG 877
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CTCCCTGTCAGCCTCCGACACGGGCCTGCCCCAGAGGTCAGGCAGCAACATAGAGCAGTACATTCACGATCTGG 1258
Query 878 ACTCGAACTCCTTTGAACTGGACTTACAGTTTTCCGAAGATGAGAAGAGGTTGTTGTTGGAGAAGCAGGCTGGC 951
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 ACTCGAACTCCTTTGAACTGGACTTACAGTTTTCCGAAGATGAGAAGAGGTTGTTGTTGGAGAAGCAGGCTGGC 1332
Query 952 GGAAACCCTTGGCACCAGTTGGTAGAAAATAATTTAATAATAAAGATGGGCCCAGTGGATAAGCGGAAGGGTTT 1025
||||||||||||||||||||.||||||||||||||||||.||||||||||||||||||||||||||||||||||
Sbjct 1333 GGAAACCCTTGGCACCAGTTTGTAGAAAATAATTTAATACTAAAGATGGGCCCAGTGGATAAGCGGAAGGGTTT 1406
Query 1026 ATTTGCAAGACGCAGACAGTTGTTGCTCACAGAAGGACCACATTTATATTATGTGGATCCTGTCAACAAAGTTC 1099
||||||||||||..|||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 ATTTGCAAGACGACGACAGCTGTTGCTCACAGAAGGACCACATTTATATTATGTGGATCCTGTCAACAAAGTTC 1480
Query 1100 TGAAAGGTGAAATTCCTCGGTCACAAGAACTTCGACCAGAGGCCAAGAATTTTAAAACTTTCTTTGTCCACACG 1173
|||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 TGAAAGGTGAAATTCCTTGGTCACAAGAACTTCGACCAGAGGCCAAGAATTTTAAAACTTTCTTTGTCCACACG 1554
Query 1174 -----------CCTAACAGGACGTATTATCTG-----------ATGG-----------ACCCCAGCGGGAACGC 1214
|| ||| |.||| |||| |||| |||.| |.||||| ||
Sbjct 1555 GTGAGTCTGTTCC---CAG---GGATT-TCTGTGTGCAGGGTAATGGGAGGGCTTTGCACCAC-GTGGGAA-GC 1619
Query 1215 A--CACAAG---TGGTGC---AGGAAGATCCAG-GAGGTTTGGAGGCAGC-----------------GATACCA 1262
| ||||.| || || |||.|| ||| |.||.|.|| |||||| .||.|||
Sbjct 1620 AGCCACAGGCCTTG--GCCAGAGGGAG---CAGCGGGGATCGG-GGCAGCTGCCTCGCCCTTTCCGACATCCCA 1687
Query 1263 GAGCCACCCGGACGCCGCTGTGCAG 1287
|| |.|||..||
Sbjct 1688 GA--CGCCCACAC------------ 1698
