Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_01190
- Subject:
- XM_006508168.2
- Aligned Length:
- 1221
- Identities:
- 825
- Gaps:
- 297
Alignment
Query 1 ATGACGCTGGACGTGGGGCCGGAGGATGAGCTGCCCGACTGGGCCGCCGCCAAAGAGTTTTACCAGAAGTACGA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CCCTAAGGACGTCATCGGCAGAGGAGTGAGCTCTGTGGTCCGCCGTTGTGTTCATCGAGCTACTGGCCACGAGT 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TTGCGGTGAAGATTATGGAAGTGACAGCTGAGCGGCTGAGTCCTGAGCAGCTGGAGGAGGTGCGGGAAGCCACA 222
|.||||||
Sbjct 1 ------------------------------------------------------------------ATGCCACA 8
Query 223 CGGCGAGAGACACACATCCTTCGCCAGGTCGCCGGCCACCCCCACATCATCACCCTCATCGATTCCTACGAGTC 296
||||||||||..|||||.|||||||||
Sbjct 9 CGGCGAGAGATGCACATTCTTCGCCAG----------------------------------------------- 35
Query 297 TTCTAGCTTCATGTTCCTGGTGTTTGACCTGATGCGGAAGGGAGAGCTGTTTGACTATCTCACAGAGAAGGTGG 370
|||||||||.|||||||||||||||||||||||.|||||.||||
Sbjct 36 ------------------------------GATGCGGAAAGGAGAGCTGTTTGACTATCTCACCGAGAAAGTGG 79
Query 371 CCCTCTCTGAAAAGGAAACCAGGTCCATCATGCGGTCTCTGCTGGAAGCAGTGAGCTTTCTCCATGCCAACAAC 444
|||||||.||||||||||||||||||||||||.|||||||.|||||||||||||||||||||||||||||||||
Sbjct 80 CCCTCTCAGAAAAGGAAACCAGGTCCATCATGAGGTCTCTACTGGAAGCAGTGAGCTTTCTCCATGCCAACAAC 153
Query 445 ATTGTGCATCGAGATCTGAAGCCCGAGAATATTCTCCTAGATGACAATATGCAGATCCGACTTTCAGATTTCGG 518
|||||.||||||||.||||||||.||||||||||||||||||||||||||||||||.||.|||||||||||.||
Sbjct 154 ATTGTACATCGAGACCTGAAGCCTGAGAATATTCTCCTAGATGACAATATGCAGATACGCCTTTCAGATTTTGG 227
Query 519 GTTCTCCTGCCACTTGGAACCTGGCGAGAAGCTTCGAGAGTTGTGTGGGACCCCAGGGTATCTAGCGCCAGAGA 592
||||||||||||.||||||.|||||||||||||||||||..||||.|||||.||||||||||||||.|||||||
Sbjct 228 GTTCTCCTGCCATTTGGAAGCTGGCGAGAAGCTTCGAGAACTGTGCGGGACTCCAGGGTATCTAGCACCAGAGA 301
Query 593 TCCTTAAATGCTCCATGGATGAAACCCACCCAGGCTATGGCAAGGAGGTCGACCTCTGGGCCTGTGGGGTGATC 666
||||||||||||||||||||||||||||||||||||||||||||||.||.||.||||||||.||||||||||||
Sbjct 302 TCCTTAAATGCTCCATGGATGAAACCCACCCAGGCTATGGCAAGGAAGTTGATCTCTGGGCTTGTGGGGTGATC 375
Query 667 TTGTTCACACTCCTGGCTGGCTCGCCACCCTTCTGGCACCGGCGGCAGATCCTGATGTTACGCATGATCATGGA 740
.||||||||||.|||||||||||.|||||.||||||||||||||.||.|||||||||.||||||||||||||||
Sbjct 376 CTGTTCACACTTCTGGCTGGCTCACCACCATTCTGGCACCGGCGCCAAATCCTGATGCTACGCATGATCATGGA 449
Query 741 GGGCCAGTACCAGTTCAGTTCCCCCGAGTGGGATGACCGTTCCAGCACTGTCAAAGACCTGATCTCCAGGCTGC 814
.|||||.||.|||||.|.|||.||.|||||||||||.|||||.|.|||.|||||||||||||||||||.|||||
Sbjct 450 AGGCCAATATCAGTTTACTTCACCTGAGTGGGATGATCGTTCAAACACCGTCAAAGACCTGATCTCCAAGCTGC 523
Query 815 TGCAGGTGGATCCTGAGGCACGCCTGACAGCTGAGCAGGCCCTACAGCACCCCTTCTTTGAGCGTTGTGAAGGC 888
||||||||||||||||.||.|||||||||||||||||.|||||.||||||||||||||||||||.|||||||||
Sbjct 524 TGCAGGTGGATCCTGAAGCGCGCCTGACAGCTGAGCAAGCCCTGCAGCACCCCTTCTTTGAGCGCTGTGAAGGC 597
Query 889 AGCCAACCCTGGAACCTCACCCCCCGCCAGCGGTTCCGGGTGGCAGTGTGGACAGTGCTGGCTGCTGGACGAGT 962
||||||||.|||||||||||.||.||||||||||||||||||||||||||||||.|.||||||||.||||||||
Sbjct 598 AGCCAACCTTGGAACCTCACGCCTCGCCAGCGGTTCCGGGTGGCAGTGTGGACAATACTGGCTGCCGGACGAGT 671
Query 963 GGCCCTAAGCACCCATCGTGTACGGCCACTGACCAAGAATGCACTGTTGAGGGACCCTTATGCGCTGCGGTCAG 1036
||||.||||||..||.|||.||||||||||.||.|||||||||||.|||||.|||||.|||||.||||||.|||
Sbjct 672 GGCCTTAAGCAGTCACCGTTTACGGCCACTAACTAAGAATGCACTATTGAGAGACCCCTATGCACTGCGGCCAG 745
Query 1037 TGCGGCACCTCATCGACAACTGTGCCTTCCGGCTCTACGGGCACTGGGTAAAGAAAGGGGAGCAGCAGAACCGG 1110
|.||||.||||||||||||||||||||||||||||||.|||||||||||||||||.||.|||||||||||||||
Sbjct 746 TACGGCGCCTCATCGACAACTGTGCCTTCCGGCTCTATGGGCACTGGGTAAAGAAGGGTGAGCAGCAGAACCGG 819
Query 1111 GCGGCTCTCTTTCAGCACCGGCCCCCTGGGCCTTTTCCCATCATGG--GCC-CTGAAGAGGAGGGAGACTCTGC 1181
||.||.|||||.|||||||.|||.|||.|| ||.||||| |||.| ||| |||||...||.||||||||.|.
Sbjct 820 GCAGCCCTCTTCCAGCACCAGCCTCCTAGG-CTGTTCCC--CATTGCTGCCACTGAACTCGAAGGAGACTCCGG 890
Query 1182 TGCTATAACTGAGGATGAGGCCGTGCTTGTGCTGGGC 1218
|||.||.||.|||||||||||....||.||.|.|.||
Sbjct 891 TGCCATCACAGAGGATGAGGCTACACTGGTACGGAGC 927