Nucleotide Global Alignment

Description

• Query: ccsbBroad304_01257
• Subject: XM_011238775.2
• Aligned Length: 1441
• Identities: 810
• Gaps: 506

Alignment

Query    1  ATGGGCCGGACCGTGGTCGTGCTGGGCGGAGGCATCAGCGGCTTGGCCGCCAGTTACCACCTGAGCCGGGCCCC  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CTGCCCCCCTAAGGTGGTCCTAGTGGAGAGCAGTGAGCGTCTGGGAGGCTGGATTCGCTCCGTTCGAGGCCCTA  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  ATGGTGCTATCTTTGAGCTTGGACCTCGGGGAATTAGGCCAGCGGGAGCCCTAGGGGCCCGGACCTTGCTCCTG  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  GTTTCTGAGCTTGGCTTGGATTCAGAAGTGCTGCCTGTCCGGGGAGACCACCCAGCTGCCCAGAACAGGTTCCT  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  CTACGTGGGCGGTGCCCTGCATGCCCTACCCACTGGCCTCAGGGGGCTACTCCGCCCTTCACCCCCCTTCTCCA  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  AACCTCTGTTTTGGGCTGGGCTGAGGGAGCTGACCAAGCCCCGGGGCAAAGAGCCTGATGAGACTGTGCACAGT  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  TTTGCCCAGCGCCGCCTTGGACCTGAGGTGGCGTCTCTAGCCATGGACAGTCTCTGCCGTGGAGTGTTTGCAGG  518
                                                      |||||||||||.|||||.|||||.|||||.||
Sbjct    1  ------------------------------------------ATGGACAGTCTTTGCCGAGGAGTATTTGCTGG  32

Query  519  CAACAGCCGTGAGCTCAGCATCAGGTCCTGCTTTCCCAGTCTCTTCCAAGCTGAGCAAACCCATCGTTCCATAT  592
            |||||||||.||||||||||||.|||||||||||||||||||||||||||||||.||||||||.||.|||||||
Sbjct   33  CAACAGCCGGGAGCTCAGCATCCGGTCCTGCTTTCCCAGTCTCTTCCAAGCTGAACAAACCCACCGGTCCATAT  106

Query  593  TACTGGGCCTGCTGCTGGGGGCAGGGCGGACCCCACAGCCAGACTCAGCACTCATTCGCCAGGCCTTGGCTGAG  666
            |.|||||.|||||||||||.|||||.|.||..||.|||||.||.||..||||.|||||.||||||..|||||||
Sbjct  107  TGCTGGGGCTGCTGCTGGGCGCAGGACAGAGTCCCCAGCCGGATTCCTCACTAATTCGTCAGGCCCGGGCTGAG  180

Query  667  CGCTGGAGCCAGTGGTCACTTCGTGGAGGTCTAGAGATGTTGCCTCAGGCCCTTGAAACCCACCTGACTAGTAG  740
            ||.|||||||||||||||||.||||||||.||.|||.|||||||.|||||.|||.|.|..|||||..|.||||.
Sbjct  181  CGATGGAGCCAGTGGTCACTCCGTGGAGGGCTGGAGGTGTTGCCCCAGGCTCTTCACAATCACCTAGCAAGTAA  254

Query  741  GGGGGTCAGTGTTCTCAGAGGCCAGCCGGTCTGTGGGCTCAGCCTCCAGGCAGAAGGGCGCTGGAAGGTATCTC  814
            .|||||||.|||.|||||.||.|||||.|||||||||||||||||.|||.|||||||||||||||||||.||||
Sbjct  255  AGGGGTCACTGTCCTCAGTGGGCAGCCAGTCTGTGGGCTCAGCCTTCAGCCAGAAGGGCGCTGGAAGGTGTCTC  328

Query  815  TAAGGGACAGCAGTCTGGAGGCTGACCACGTTATTAGTGCCATTCCAGCTTCAGTGCTCAGTGAGCTGCTCCCT  888
            ||.||||||||||||||||||||||||||.||||.|||||||||||||||||||.||||||..|||||||||||
Sbjct  329  TAGGGGACAGCAGTCTGGAGGCTGACCACATTATAAGTGCCATTCCAGCTTCAGAGCTCAGCAAGCTGCTCCCT  402

Query  889  GCTGAGGCTGCCCCTCTGGCTCGTGCCCTGAGTGCCATCACTGCAGTGTCTGTAGCTGTGGTGAATCTGCAGTA  962
            ||.||||||||.|||||.|||||...|||||||.||||||..|||||||||||.||||||||||||||||||||
Sbjct  403  GCCGAGGCTGCACCTCTAGCTCGAATCCTGAGTACCATCAAGGCAGTGTCTGTTGCTGTGGTGAATCTGCAGTA  476

Query  963  CCAAGGAGCCCATCTGCCTGTCCAGGGATTTGGACATTTGGTGCCATCTTCAGAAGATCCAGGA--GTCCTGGG  1034
            ||.||||||...||||||||||||||||||||||||||||||||||||.||||||||.||  ||  ||||||||
Sbjct  477  CCGAGGAGCTTGTCTGCCTGTCCAGGGATTTGGACATTTGGTGCCATCGTCAGAAGACCC--GACTGTCCTGGG  548

Query 1035  AATCGTGTATGACTCAGTTGCTTTCCCTGAGCAGGACGGGAGCCCCCCTGGCCTCAGAGTGACTGTGATGCTGG  1108
            |||.|||||.|||||.||.|||||.|||||.|||||.||||.||||||..||||||||||||||||||||.|||
Sbjct  549  AATTGTGTACGACTCGGTGGCTTTTCCTGAACAGGATGGGAACCCCCCAAGCCTCAGAGTGACTGTGATGTTGG  622

Query 1109  GAGGTTCCTGGTTACAGACACTGGAGGCTAGTGG--------CTGTGTCTTATCTCAGGAGCTGTTTCAACAGC  1174
            ||||||.||||.||||||..||..|.||| |.||        |||       ||||..||||||||.||.||.|
Sbjct  623  GAGGTTACTGGCTACAGAAGCTAAAAGCT-GCGGGCCACCAACTG-------TCTCCAGAGCTGTTCCAGCAAC  688

Query 1175  GGGCCCAGGAAGCAGCTGCTACACAATTAGGACTGAAGGAGATGCCGAGCCACTGCTTGGTCCATCTACACAAG  1248
            ..||||||||.|||||.||.|||||.|||||||||||.||....|||||.||||||.|||||||||||||||||
Sbjct  689  AAGCCCAGGAGGCAGCCGCCACACAGTTAGGACTGAAAGAACCACCGAGTCACTGCCTGGTCCATCTACACAAG  762

Query 1249  AACTGCATTCCCCAGTATACACTAGGTCACTGGCAAAAACTAGAGTCAGCTAGGCAATTCCTGACTGCTCACAG  1322
            |||||.||.||.|||||||||.||||.|||||||||||||||||.|||||||.||||||||||||.||.||.||
Sbjct  763  AACTGTATCCCTCAGTATACAATAGGCCACTGGCAAAAACTAGACTCAGCTATGCAATTCCTGACGGCCCAGAG  836

Query 1323  GTTGCCCCTGACTCTGGCTGGAGCCTCCTATGAGGGAGTTGCTGTTAATGACTGTATAGAGAGTGGGCGCCAGG  1396
            |||||||||||||.||||||||||||||||||||||.||||||||.||||||||||||||||||||||||||||
Sbjct  837  GTTGCCCCTGACTTTGGCTGGAGCCTCCTATGAGGGGGTTGCTGTCAATGACTGTATAGAGAGTGGGCGCCAGG  910

Query 1397  CAGCAGTCAGTGTCCTGGGCACAGAACCTAACAGC  1431
            |||||||...||||||||||||||||.||||||||
Sbjct  911  CAGCAGTTGCTGTCCTGGGCACAGAATCTAACAGC  945