Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_01284
- Subject:
- XM_024448391.1
- Aligned Length:
- 1872
- Identities:
- 1138
- Gaps:
- 708
Alignment
Query 1 ATGCCCAGCAGGACCGGCCCCAAGATGGAAGGGAGCGGCGGCCGCGTCCGCCTCAAGGCGCATTACGGGGGGGA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CATCTTCATCACCAGCGTGGACGCCGCCACGACCTTCGAGGAGCTCTGTGAGGAAGTGAGAGACATGTGTCGTC 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TGCACCAGCAGCACCCGCTCACCCTCAAGTGGGTGGACAGCGAAGGTGACCCTTGCACGGTGTCCTCCCAGATG 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GAGCTGGAAGAGGCTTTCCGCCTGGCCCGTCAGTGCAGGGATGAAGGCCTCATCATTCATGTTTTCCCGAGCAC 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 CCCTGAGCAGCCTGGCCTGCCATGTCCGGGAGAAGACAAATCTATCTACCGCCGGGGAGCCAGAAGATGGAGGA 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 AGCTGTACCGTGCCAACGGCCACCTCTTCCAAGCCAAGCGCTTTAACAGGAGAGCGTACTGCGGTCAGTGCAGC 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 GAGAGGATATGGGGCCTCGCGAGGCAAGGCTACAGGTGCATCAACTGCAAACTGCTGGTCCATAAGCGCTGCCA 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 CGGCCTCGTCCCGCTGACCTGCAGGAAGCATATGGATTCTGTCATGCCTTCCCAAGAGCCTCCAGTAGACGACA 592
|||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 -------------------------------ATGGATTCTGTCATGCCTTCCCAAGAGCCTCCAGTAGACGACA 43
Query 593 AGAACGAGGACGCCGACCTTCCTTCCGAGGAGACAGATGGAATTGCTTACATTTCCTCATCCCGGAAGCATGAC 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 44 AGAACGAGGACGCCGACCTTCCTTCCGAGGAGACAGATGGAATTGCTTACATTTCCTCATCCCGGAAGCATGAC 117
Query 667 AGCATTAAAGACGACTCGGAGGACCTTAAGCCAGTTATCGATGGGATGGATGGAATCAAAATCTCTCAGGGGCT 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 118 AGCATTAAAGACGACTCGGAGGACCTTAAGCCAGTTATCGATGGGATGGATGGAATCAAAATCTCTCAGGGGCT 191
Query 741 TGGGCTGCAGGACTTTGACCTAATCAGAGTCATCGGGCGCGGGAGCTACGCCAAGGTTCTCCTGGTGCGGTTGA 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 192 TGGGCTGCAGGACTTTGACCTAATCAGAGTCATCGGGCGCGGGAGCTACGCCAAGGTTCTCCTGGTGCGGTTGA 265
Query 815 AGAAGAATGACCAAATTTACGCCATGAAAGTGGTGAAGAAAGAGCTGGTGCATGATGACGAGGATATTGACTGG 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 266 AGAAGAATGACCAAATTTACGCCATGAAAGTGGTGAAGAAAGAGCTGGTGCATGATGACGAGGATATTGACTGG 339
Query 889 GTACAGACAGAGAAGCACGTGTTTGAGCAGGCATCCAGCAACCCCTTCCTGGTCGGATTACACTCCTGCTTCCA 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 340 GTACAGACAGAGAAGCACGTGTTTGAGCAGGCATCCAGCAACCCCTTCCTGGTCGGATTACACTCCTGCTTCCA 413
Query 963 GACGACAAGTC------------------------GGTTGTTCCTGGTCATTGAGTACGTCAACGGCGGGGACC 1012
||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 414 GACGACAAGTCGCCTCCGGCGCCTCTCTCCCTGCAGGTTGTTCCTGGTCATTGAGTACGTCAACGGCGGGGACC 487
Query 1013 TGATGTTCCACATGCAGAGGCAGAGGAAGCTCCCTGAGGAGCACGCCAGGTTCTACGCGGCCGAGATCTGCATC 1086
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 488 TGATGTTCCACATGCAGAGGCAGAGGAAGCTCCCTGAGGAGCACGCCAGGTTCTACGCGGCCGAGATCTGCATC 561
Query 1087 GCCCTCAACTTCCTGCACGAGAGGGGGATCATCTACAGGGACCTGAAGCTGGACAACGTCCTCCTGGATGCGGA 1160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 562 GCCCTCAACTTCCTGCACGAGAGGGGGATCATCTACAGGGACCTGAAGCTGGACAACGTCCTCCTGGATGCGGA 635
Query 1161 CGGGCACATCAAGCTCACAGACTACGGCATGTGCAAGGAAGGCCTGGGCCCTGGTGACACAACGAGCACTTTCT 1234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 636 CGGGCACATCAAGCTCACAGACTACGGCATGTGCAAGGAAGGCCTGGGCCCTGGTGACACAACGAGCACTTTCT 709
Query 1235 GCGGAACCCCGAATTACATCGCCCCCGAAATCCTGCGGGGAGAGGAGTACGGGTTCAGCGTGGACTGGTGGGCG 1308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 710 GCGGAACCCCGAATTACATCGCCCCCGAAATCCTGCGGGGAGAGGAGTACGGGTTCAGCGTGGACTGGTGGGCG 783
Query 1309 CTGGGAGTCCTCATGTTTGAGATGATGGCCGGGCGCTCCCCGTTCGACATCATCACCGACAACCCGGACATGAA 1382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 784 CTGGGAGTCCTCATGTTTGAGATGATGGCCGGGCGCTCCCCGTTCGACATCATCACCGACAACCCGGACATGAA 857
Query 1383 CACAGAGGACTACCTTTTCCAAGTGATCCTGGAGAAGCCCATCCGGATCCCCCGGTTCCTGTCCGTCAAAGCCT 1456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 858 CACAGAGGACTACCTTTTCCAAGTGATCCTGGAGAAGCCCATCCGGATCCCCCGGTTCCTGTCCGTCAAAGCCT 931
Query 1457 CCCATGTTTTAAAAGGATTTTTAAATAAGGACCCCAAAGAGAGGCTCGGCTGCCGGCCACAGACTGGATTTTCT 1530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 932 CCCATGTTTTAAAAGGATTTTTAAATAAGGACCCCAAAGAGAGGCTCGGCTGCCGGCCACAGACTGGATTTTCT 1005
Query 1531 GACATCAAGTCCCACGCGTTCTTCCGCAGCATAGACTGGGACTTGCTGGAGAAGAAGCAGGCGCTCCCTCCATT 1604
|||||||||||||||||||||||||||||||||||||||||||||.||.|
Sbjct 1006 GACATCAAGTCCCACGCGTTCTTCCGCAGCATAGACTGGGACTTGATGCA------------------------ 1055
Query 1605 CCAGCCA---CAGAT-CACAGACGACTACGGTCTGGACAACTTTGACACACAGTTCACCAG-CGA---GCCCGT 1670
|||.|| ||||| ||||||| |.|.||||.||.|.||||| |||| ||| |..||.
Sbjct 1056 -CAGACAACTCAGATGCACAGAC-------GCCCGGACGACGTGGACAC--------CCAGACGATGTGGACGC 1113
Query 1671 GCAGCTGAC-------CCCAGACGATGAGGATGC--------CATAAAGA---GGATCGA-----CCAGTCAGA 1721
.|||..||| |.|||||||||.|||||| |.||.|.| |||| || ||| ||||
Sbjct 1114 ACAGACGACATGGACGCACAGACGATGTGGATGCACGGACGACGTAGACACACGGAT-GACTCATCCA--CAGA 1184
Query 1722 GTTCGAAGGCTTTGAGT-ATAT-CA-----ACCCATTATTGCTGTC----------CACCGAGGAGTCGG---- 1774
|||.| |.|| || ||||| |.| |||.||.||..|||
Sbjct 1185 ------------TGACTCAGATGCACGGACACCCA--------GACGACGCGGACGCACAGACGACGCGGACGC 1238
Query 1775 -----TG--------------- 1776
||
Sbjct 1239 ACAGATGACGTGGACGCACAGA 1260
