Nucleotide Global Alignment

Description

• Query: ccsbBroad304_01287
• Subject: XM_006534950.4
• Aligned Length: 1404
• Identities: 887
• Gaps: 261

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGAGCCTCCATTTCTTATACTACTGCAGTGAACCAACCTTGGATGTGAAAATTGCCTTTTGTCAGGGATTCGA  74

Query    1  ----------------------------------------ATGAGCAGAAGCAAGCGT-GACAACAATTTTTAT  33
                                                    |||||||.||||||| || ||||||.|.||.||.
Sbjct   75  TAAACACGTGGATGTGTCATCTATTGCCAAACATTACAACATGAGCAAAAGCAAG-GTGGACAACCAGTTCTAC  147

Query   34  AGTGTAGAGATTGGAGATTCTACATTCACAGTCCTGAAACGATATCAGAATTTAAAACCTATAGGCTCAGGAGC  107
            |||||.||..|.||.||.||.||.|||||.||.||.||.||.||.|||||..|.||.||.||.|||||.||.||
Sbjct  148  AGTGTGGAAGTGGGGGACTCAACCTTCACCGTTCTTAAGCGCTACCAGAACCTGAAGCCAATTGGCTCTGGGGC  221

Query  108  TCAAGGAATAGTATGCGCAGCTTATGATGCCATTCTTGAAAGAAATGTTGCAATCAAGAAGCTAAGCCGACCAT  181
            |||.||||||||.||.||.||.||.||.||..|.|||||.||||||||.||.||.||||||||.|||.||||.|
Sbjct  222  TCAGGGAATAGTCTGTGCTGCGTACGACGCTGTCCTTGACAGAAATGTGGCCATTAAGAAGCTCAGCAGACCCT  295

Query  182  TTCAGAATCAGACTCATGCCAAGCGGGCCTACAGAGAGCTAGTTCTTATGAAATGTGTTAATCACAAAAATATA  255
            |.|||||.||.|||||.||||||.||||.|||.|.|||||.||.||.|||||.|||||.||.||.|||||.||.
Sbjct  296  TCCAGAACCAAACTCACGCCAAGAGGGCTTACCGGGAGCTGGTCCTCATGAAGTGTGTGAACCATAAAAACATT  369

Query  256  ATTGGCCTTTTGAATGTTTTCACACCACAGAAATCCCTAGAAGAATTTCAAGATGTTTACATAGTCATGGAGCT  329
            |||.||.|.||.||||||||.|||||.||||||.|.||.||.||.||.||||||||.|||.||||.|||||.||
Sbjct  370  ATTAGCTTATTAAATGTTTTTACACCCCAGAAAACACTGGAGGAGTTCCAAGATGTCTACTTAGTGATGGAACT  443

Query  330  CATGGATGCAAATCTTTGCCAAGTGATTCAGATGGAGCTAGATCATGAAAGAATGTCCTACCTTCTCTATCAGA  403
            .|||||.||.||.||.||.||.|||||||||||||||||.||.||.||..|.|||||.|||.|.||.||.||||
Sbjct  444  GATGGACGCCAACCTGTGTCAGGTGATTCAGATGGAGCTGGACCACGAGCGGATGTCTTACTTGCTGTACCAGA  517

Query  404  TGCTGTGTGGAATCAAGCACCTTCATTCTGCTGGAATTATTCATCGGGACTTAAAGCCCAGTAATATAGTAGTA  477
            ||||||||||.|||||||||||.||.||.|||||.||.||.||..||||||||||.||||||||.||.|||||.
Sbjct  518  TGCTGTGTGGCATCAAGCACCTCCACTCCGCTGGGATCATCCACAGGGACTTAAAACCCAGTAACATTGTAGTC  591

Query  478  AAATCTGATTGCACTTTGAAGATTCTTGACTTCGGTCTGGCCAGGACTGCAGGAACGAGTTTTATGATGACGCC  551
            ||.|||||||||||..||||.||.||.||||||||.|||||||||||.||.||.||.||.||.||||||||.||
Sbjct  592  AAGTCTGATTGCACACTGAAAATCCTCGACTTCGGACTGGCCAGGACAGCGGGTACAAGCTTCATGATGACTCC  665

Query  552  TTATGTAGTGACTCGCTACTACAGAGCACCCGAGGTCATCCTTGGCATGGGCTACAAGGAAAACGTTGACATTT  625
            .|||||.|||||.||.||.||||||||.||.|||||||||||.|||||||||||||||||.|||||||||.|.|
Sbjct  666  GTATGTGGTGACGCGATATTACAGAGCCCCTGAGGTCATCCTGGGCATGGGCTACAAGGAGAACGTTGACCTGT  739

Query  626  GGTCAGTTGGGTGCATCATGGGAGAAATGATCAAAGGTGGTGTTTTGTTCCCAGGTACAGATCATATTGATCAG  699
            |||||||.|||||||||||||||||||||.|.|||||....||..|||||||.||.||.|||||||||||.|||
Sbjct  740  GGTCAGTAGGGTGCATCATGGGAGAAATGGTAAAAGGCACAGTGCTGTTCCCTGGCACTGATCATATTGACCAG  813

Query  700  TGGAATAAAGTTATTGAACAGCTTGGAACACCATGTCCTGAATTCATGAAGAAACTGCAACCAACAGTAAGGAC  773
            |||||.|||||.||.||.|||||.|||||.||.|||||.||.||||||||||||.||||.||.|||||.||.|.
Sbjct  814  TGGAACAAAGTCATCGAGCAGCTAGGAACTCCGTGTCCAGAGTTCATGAAGAAATTGCAGCCCACAGTCAGAAA  887

Query  774  TTACGTTGAAAACAGACCTAAATATGCTGGATATAGCTTTGAGAAACTCTTCCCTGATGTCCTTTTCCCAGCTG  847
            .|||||.||.||..|.||.||.||.||.|||...|.|||....||.|||||.||.|||..|||.||||||||.|
Sbjct  888  CTACGTGGAGAATCGGCCCAAGTACGCAGGACTCACCTTCCCCAAGCTCTTTCCAGATTCCCTCTTCCCAGCGG  961

Query  848  ACTCAGAACACAACAAACTTAAAGCCAGTCAGGCAAGGGATTTGTTATCCAAAATGCTGGTAATAGATGCATCT  921
            |.||.||.|||||.||||||||||||||.||.||.|||||||||||.||.||.|||.|.||.||.||..||.|.
Sbjct  962  ATTCTGAGCACAATAAACTTAAAGCCAGCCAAGCCAGGGATTTGTTGTCTAAGATGTTAGTGATTGACCCAGCG  1035

Query  922  AAAAGGATCTCTGTAGATGAAGCTCTCCAACACCCGTACATCAATGTCTGGTATGATCCTTCTGAAGCAGAAGC  995
            ||.|||||.||.||.||.||.||.||.||.||.|||||||||||.||.|||||.||.||..||||||..||.||
Sbjct 1036  AAGAGGATATCGGTGGACGACGCACTGCAGCATCCGTACATCAACGTTTGGTACGACCCGGCTGAAGTGGAGGC  1109

Query  996  TCCACCACCAAAGATCCCTGACAAGCAGTTAGATGAAAGGGAACACACAATAGAAGAGTGGAAAGAATTGATAT  1069
            .||.||.||..||||...|||.||||||.|.|||||||||||.|||||.||.|||||.|||||||||.|.||.|
Sbjct 1110  GCCTCCGCCTCAGATATATGATAAGCAGCTGGATGAAAGGGAGCACACCATCGAAGAATGGAAAGAACTTATCT  1183

Query 1070  ATAAGGAAGTTATGGACTTGGAGGAGAGAACCAAGAATGG---AGTTATACGGGGGCAGCCCTCTCCTT-----  1135
            |.|||||.||.|||.|||..||.||||..||.||||||||   |||.|.|   ||.||||||||.||||     
Sbjct 1184  ACAAGGAGGTAATGAACTCAGAAGAGAAGACTAAGAATGGCGTAGTCAAA---GGCCAGCCCTCGCCTTCAGCA  1254

Query 1136  TAGGTGCAGCAGTGATCAATGGCTCTCAGCATCCATCATCATCGTCGTCTGTCAATGATGTGTCTTCAATGTCA  1209
            .|||||||||||                                                              
Sbjct 1255  CAGGTGCAGCAG--------------------------------------------------------------  1266

Query 1210  ACAGATCCGACTTTGGCCTCTGATACAGACAGCAGTCTAGAAGCAGCAGCTGGGCCTCTGGGCTGCTGTAGA  1281
                                                                                    
Sbjct 1267  ------------------------------------------------------------------------  1266