Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_01306
- Subject:
- NR_026824.1
- Aligned Length:
- 2021
- Identities:
- 923
- Gaps:
- 1028
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCAGAAGGAGGAAGGACAGCACAGCCTACAGCCGTGCTCAGGAAGTTTCTGGAACCTAGGCTCATCTCCACAGA 74
Query 1 -------------------------ATGGGACCCCTCTCAGCCCCTCCCTGCACTCAGCACATCACCTGGAAGG 49
|||||.|||||||||||||||||||||||.||||||||||..|||||||
Sbjct 75 GGAGAACACACAAGCAGCAGAGACCATGGGGCCCCTCTCAGCCCCTCCCTGCACACAGCACATCAAATGGAAGG 148
Query 50 GGCTCCTGCTCACAGCATCACTTTTAAACTTCTGGAACCTGCCCACCACTGCCCAAGTAATAATTGAAGCCAAG 123
||.||||||||||||||||||||||||||||||||||||..||.||||.|||||||||.|..|.|||||||.||
Sbjct 149 GGGTCCTGCTCACAGCATCACTTTTAAACTTCTGGAACCCACCTACCATTGCCCAAGTCACGACTGAAGCCCAG 222
Query 124 CCACCCAAAGTTTCCGAGGGGAAGGATGTTCTTCTACTTGTCCACAATTTGCCCCAGAATCTTACTGGCTACAT 197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||
Sbjct 223 CCACCCAAAGTTTCCGAGGGGAAGGATGTTCTTCTACTTGTCCACAATTTGCCCCAGAATCTTACTGGTTACAT 296
Query 198 CTGGTACAAAGGGCAAATGACGGACCTCTACCATTACATTACATCATATGTAGTACACGGTCA---AATTATAT 268
.|||||.|||||||||||.|.||||||||||||||||||||||||||||||||||.||||||| |||||.||
Sbjct 297 GTGGTAGAAAGGGCAAATAAGGGACCTCTACCATTACATTACATCATATGTAGTAGACGGTCAAAGAATTACAT 370
Query 269 ATGGGCCTGCCTACAGTGGACGAGAAACAGTATATTCCAATGCATCCCTGCTGATCCAGAATGTCACACAGGAG 342
||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|.||||
Sbjct 371 ATGGGCCTGCATACAGTGGACGAGAAACAGTATATTCCAATGCATCCCTGCTGATCCAGAATGTCACCCGGGAG 444
Query 343 GATGCAGGATCCTACACCTTACACATCATAAAGCGAGGCGATGGGACTGGAGGAGTAACTGGATATTTCACTGT 416
||.|.||.||||||||||||||||||||||.|||||||.|||||||||.||||||||||||||.|||||||..|
Sbjct 445 GACGGAGTATCCTACACCTTACACATCATACAGCGAGGTGATGGGACTAGAGGAGTAACTGGAAATTTCACCTT 518
Query 417 CACCTTATACTCGGAGACTCCCAAGCCCTCCATCTCCAGCAGCAACTTAAACCCCAGGGAGGTCATGGAGGCTG 490
|||||||||
Sbjct 519 CACCTTATA----------------------------------------------------------------- 527
Query 491 TGCGCTTAATCTGTGATCCTGAGACTCCGGATGCAAGCTACCTGTGGTTGCTGAATGGTCAGAACCTCCCTATG 564
Sbjct 528 -------------------------------------------------------------------------- 527
Query 565 ACTCACAGGTTGCAGCTGTCCAAAACCAACAGGACCCTCTATCTATTTGGTGTCACAAAGTATATTGCAGGACC 638
Sbjct 528 -------------------------------------------------------------------------- 527
Query 639 CTATGAATGTGAAATACGGAACCCAGTGAGTGCCAGCCGCAGTGACCCAGTCACCCTGAATCTCCTCCCGAAGC 712
||||||||
Sbjct 528 ------------------------------------------------------------------CCCGAAGC 535
Query 713 TGCCCATGCCTTACATCACCATCAACAACTTAAACCCCAGGGAGAAGAAGGATGTGTTAGCCTTCACCTGTGAA 786
||||||.|||.|||||||||||||||||||.|||.|||||||||||.||||||||.|||.|||||||||||||.
Sbjct 536 TGCCCAAGCCCTACATCACCATCAACAACTCAAAACCCAGGGAGAATAAGGATGTCTTACCCTTCACCTGTGAC 609
Query 787 CCTAAGAGTCGGAACTACACCTACATTTGGTGGCTAAATGGTCAGAGCCTCCCGGTCAGTCCGAGGGTAAAGCG 860
|||||.|||..||||||||||||||..||||||||||||||||||||||||||.||||||||.|||||||||.|
Sbjct 610 CCTAAAAGTGAGAACTACACCTACACGTGGTGGCTAAATGGTCAGAGCCTCCCAGTCAGTCCCAGGGTAAAGTG 683
Query 861 ACCCATTGAAAACAGGATACTCATTCTACCCAGTGTCACGAGAAATGAAACAGGACCCTATCAATGTGAAATAC 934
||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 684 ACCCATTGAAAACAGGATCCTCATTCTACCCAGTGTCACGAGAAATGAAACAGGACCCTATCAATGTGAAATAC 757
Query 935 GGGACCGATATGGTGGCATCCGCAGTAACCCAGTCACCCTGAATGTCCTCTATGGTCCAGACCTCCCCAGAATT 1008
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 758 GGGACCGATATGGTGGCATCCGCAGTAACCCAGTCACCCTGAATGTCCTCTATGGTCCAGACCTCCCCAGAATT 831
Query 1009 TACCCTTCATTCACCTATTACCGTTCAGGAGAAAACCTCGACTTGTCCTGCTTTGCGGACTCTAACCCACCGGC 1082
||||||||||||||||||||||||||||||.|||||||..|||||||||||||.|||||.|.||||||||||||
Sbjct 832 TACCCTTCATTCACCTATTACCGTTCAGGACAAAACCTTTACTTGTCCTGCTTCGCGGAATGTAACCCACCGGC 905
Query 1083 AGAGTATTCTTGGACAATTAATGGGAAGTTTCAGCTATCAGGACAAAAGCTCTTTATCCCCCAAATTACTACAA 1156
|.||||.||||||||||||||||||||||||||||.|||||.||||||||||||||||||||||||||||||||
Sbjct 906 ATAGTACTCTTGGACAATTAATGGGAAGTTTCAGCAATCAGAACAAAAGCTCTTTATCCCCCAAATTACTACAA 979
Query 1157 ATCATAGCGGGCTCTATGCTTGCTCTGTTCGTAACTCAGCCACTGGCAAGGAAATCTCCAAATCCATGATAGTC 1230
|.|||||.||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||.||||
Sbjct 980 AGCATAGAGGGCTCTATGCTTGCTCTGTTCGTAACTCAGCCACTGGCAAGGAAAGCTCCAAATCCATGACAGTC 1053
Query 1231 AAAGTCTCTGGTCCCTGCCATGGAAACCAGACAGAGTCTCAT-------------------------------- 1272
.|||||||||||.|||||||||||.|||.|.|||.|||||||
Sbjct 1054 GAAGTCTCTGGTGCCTGCCATGGAGACCTGGCAGGGTCTCATTCGTGACTGCCATAACAGAGACACTGAGAAAA 1127
Query 1273 -------------------------------------------------------------------------- 1272
Sbjct 1128 AGATGCAACCATGGAAAGGTGCAAAGGTGGCAAGTTCTAATGACATAGAAAATAGCAATCAGCCTTTCTCACAT 1201
Query 1273 -------------------------------------------------------------------------- 1272
Sbjct 1202 CTGAAAGCCTTCCAAAATATCTGAGTGCAGTAGAGAATTGACAGAGGACTGATCACCAACCTAGAAGTATGCTC 1275
Query 1273 -------------------------------------------------------------------------- 1272
Sbjct 1276 CTCCAGGAATAGGACGTCTTCCTTTCTTTACTCCAATAGAGCAGCGGTGATGTCATTTCTGTATTTCAGGAAGA 1349
Query 1273 -------------------------------------------------------------------------- 1272
Sbjct 1350 CTGGCAGGAGATTTATGGAAAAGACTCTGACAAGGACTCTGGAATACAAGCTCCTGATAACTTCAAGATCATAC 1423
Query 1273 -------------------------------------------------------------------------- 1272
Sbjct 1424 CACTGGACTAAGAACTTTCAAAATTTTAATGAACAGGCTGATACCTTCATGAAATTCAAGACAAAGAAGAAAAA 1497
Query 1273 -------------------------------------------------------------------------- 1272
Sbjct 1498 AAACTCAATTTTATTGGAATAAATAATCAAAAGGATAATGTTTTCATAATTTTCTATTTGAAAATGTGCTGAGT 1571
Query 1273 -------------------------------------------------------------------------- 1272
Sbjct 1572 CTTTGAATGTTTTATTCTCCAGATTTATGAACTTTTTTCCTTGAACAATTGGTAAAGTATACTTTTGTAAACAA 1645
Query 1273 -------------------------------------------------------------------------- 1272
Sbjct 1646 AAATTGAAACATTTGCTTTTGCTGAGTGCCCCAGAATTGGGAAACTATTCATGAGTATTCATATGTTTATGGTA 1719
Query 1273 ----------------------- 1272
Sbjct 1720 ATAAAGTTATTTGCACAACTTCA 1742
