Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_01369
- Subject:
- XM_011244029.1
- Aligned Length:
- 1294
- Identities:
- 932
- Gaps:
- 218
Alignment
Query 1 ATGGGTAGCAAGAAACTAAAACGAGTGGGTTTATCACAAGAGCTGTGTGACCGTCTGAGTAGACATCAGATCCT 74
|||.|.|||||||||||||.|||||||||||||||.|.||||||||||||||||.|.||.|||.|.|||||..|
Sbjct 1 ATGAGCAGCAAGAAACTAAGACGAGTGGGTTTATCTCCAGAGCTGTGTGACCGTTTAAGCAGATACCAGATTGT 74
Query 75 TACCTGTCAGGACTTTTTATGTCTTTCCCCACTGGAGCTTATGAAGGTGACTGGTCTGAGTTATCGAGGTGTCC 148
||.|||||||.||||||||.||||.||||||||.||.||||||||.||||||||.||||||||..|||||||||
Sbjct 75 TAACTGTCAGCACTTTTTAAGTCTCTCCCCACTAGAACTTATGAAAGTGACTGGCCTGAGTTACAGAGGTGTCC 148
Query 149 ATGAACTTCTATGTATGGTCAGCAGGGCCTGTGCCCCAAAGATGCAAACGGCTTATGGGATAAAAGCACAAAGG 222
|.||.|||||...||..||.||||.||||||||||||..||||||||||||||||||.|.||||..|||.||||
Sbjct 149 ACGAGCTTCTTCATACAGTAAGCAAGGCCTGTGCCCCGCAGATGCAAACGGCTTATGAGTTAAAGACACGAAGG 222
Query 223 TCTGCTGATTTCTCACCAGCATTCTTATCTACTACCCTTTCTGCTTTGGACGAAGCCCTGCATGGTGGTGTGGC 296
|||||..||.|||||||.||||||.|.|||||||||||.|..||.|||||.|||||..||||.|||||||||.|
Sbjct 223 TCTGCACATCTCTCACCGGCATTCCTGTCTACTACCCTGTGCGCCTTGGATGAAGCATTGCACGGTGGTGTGCC 296
Query 297 TTGTGGATCCCTCACAGAGATTACAGGTCCACCAGGTTGTGGAAAAACTCAGTTTTGTATAATGATGAGCATTT 370
|||||||||.|||||||||||||||||||||||||||||.|||||||||||||||||.|||||||||||..|.|
Sbjct 297 TTGTGGATCTCTCACAGAGATTACAGGTCCACCAGGTTGCGGAAAAACTCAGTTTTGCATAATGATGAGTGTCT 370
Query 371 TGGCTACATTACCCACCAACATGGGAGGATTAGAAGGAGCTGTGGTGTACATTGACACAGAGTCTGCATTTAGT 444
|.|||||||||||.||||.|.||||||||||||||||.||||||||.|||||.|||||||||||||||||||.|
Sbjct 371 TAGCTACATTACCTACCAGCCTGGGAGGATTAGAAGGGGCTGTGGTCTACATCGACACAGAGTCTGCATTTACT 444
Query 445 GCTGAAAGACTGGTTGAAATAGCAGAATCCCGTTTTCC-CAGATATTTTAACACTGAAGAAAAGTTACTTTTGA 517
|||||.|||||||||||.||.||.|||||.|||||||| || |||||||||||||||.|||||.||.|||.|||
Sbjct 445 GCTGAGAGACTGGTTGAGATTGCGGAATCTCGTTTTCCACA-ATATTTTAACACTGAGGAAAAATTGCTTCTGA 517
Query 518 CAAGTAGTAAAGTTCATCTTTATCGGGAACTCACCTGTGATGAAGTTCTACAAAGGATTGAATCTTTGGAAGAA 591
|.||.||||.|||||||||||..||.||.|||||||||||.|...|||||||||||.||||.||||||||.|||
Sbjct 518 CCAGCAGTAGAGTTCATCTTTGCCGAGAGCTCACCTGTGAGGGGCTTCTACAAAGGCTTGAGTCTTTGGAGGAA 591
Query 592 GAAATTATCTCAAAAGGAATTAAACTTGTGATTCTTGACTCTGTTGCTTCTGTGGTCAGAAAGGAGTTTGATGC 665
||.||.||.||.||||||.||||.|||||||||.|||||||..||||||||||||||||||||||||||||..|
Sbjct 592 GAGATCATTTCGAAAGGAGTTAAGCTTGTGATTGTTGACTCCATTGCTTCTGTGGTCAGAAAGGAGTTTGACCC 665
Query 666 ACAACTTCAAGGCAATCTCAAAGAAAGAAACAAGTTCTT-GGCAAGAGAGGCATCCTCCTTGAAGTATTTGGCT 738
..|.|||||||||||..||||||||||.||||||||||| ||||| ||..||.||||...|||||||..||||.
Sbjct 666 GAAGCTTCAAGGCAACATCAAAGAAAGGAACAAGTTCTTGGGCAA-AGGAGCGTCCTTACTGAAGTACCTGGCA 738
Query 739 GAGGAGTTTTCAATCCCA---------------------------------------------GTTATCTTGAC 767
|.|||||||||||||||| |||||||||||
Sbjct 739 GGGGAGTTTTCAATCCCAGGAGAGAGGAAGATGCCTGCCACATCTGCATCTTCAGGAGGGAAGGTTATCTTGAC 812
Query 768 GAATCAGATTACAACCCATCTGAGTGGAGCCCTGGCTTCTCAGGCAGACCTGGTGTCTCCAGCTGATGATTTGT 841
||||||.|||||.||||||||||||||||||||..|||||||.|||||||||||||||||||||||||||||||
Sbjct 813 GAATCAAATTACGACCCATCTGAGTGGAGCCCTCCCTTCTCAAGCAGACCTGGTGTCTCCAGCTGATGATTTGT 886
Query 842 CCCTGTCTG----------------------------------------------------------------- 850
|||||||||
Sbjct 887 CCCTGTCTGAAGATGCCAGAAGGAAGGCAGCTGGGCCAGCAGAGAGGCCTGAACTCAGGCCTCAACAATGGCTG 960
Query 851 ----AAGGCACTTCTGGATCCAGCTGTGTGATAGCCGCACTAGGAAATACCTGGAGTCACAGTGTGAATACCCG 920
|||||||||||||||||||||||.||.||||.|||||||||||.||.|||.|||||.|||||||.|||||
Sbjct 961 CAGCAAGGCACTTCTGGATCCAGCTGTTTGGTAGCTGCACTAGGAAACACATGGGGTCACTGTGTGAACACCCG 1034
Query 921 GCTGATCCTCCAGTACCTTGATTCAGAGAGAAGACAGATTCTTATTGCCAAGTCCCCTCTGGCTCCCTTCACCT 994
||||||.||||||||||||||||||||||||||.||||||||.|||||||||||.|||||||||.|||||||||
Sbjct 1035 GCTGATTCTCCAGTACCTTGATTCAGAGAGAAGGCAGATTCTCATTGCCAAGTCTCCTCTGGCTGCCTTCACCT 1108
Query 995 CATTTGTCTACACCATCAAGGAGGAAGGCCTGGTTCTTCAAGAGACAACA-----TTTTGC-TCT------GTC 1056
|.|||||||||||||||||||.|||||||||||||||||||||..||.|| |..||| ||| ||
Sbjct 1109 CCTTTGTCTACACCATCAAGGGGGAAGGCCTGGTTCTTCAAGATTCATCAGGTCTTCATGCATCTGGGCTGGT- 1181
Query 1057 ACCCAA---GCTGAACTGA-----------ACTGGGCTCCAGAAATCCTCCCACCTCAGCCTCCTGAGCAGCTA 1116
||| |||||.||.| |||||| ||||
Sbjct 1182 ---CAAGGTGCTGAGCTCATCTTCTGTATTACTGGG------------TCCC---------------------- 1218
Query 1117 GGACTACAGATGTGCCACCATACCCAGCTAATTTTT 1152
Sbjct 1219 ------------------------------------ 1218