Nucleotide Global Alignment

Description

Query:
ccsbBroad304_01370
Subject:
NM_001142571.2
Aligned Length:
1056
Identities:
950
Gaps:
84

Alignment

Query    1  ATGGGCGTGCTCAGGGTCGGACTGTGCCCTGGCCTTACCGAGGAGATGATCCAGCTTCTCAGGAGCCACAGGAT  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGGCGTGCTCAGGGTCGGACTGTGCCCTGGCCTTACCGAGGAGATGATCCAGCTTCTCAGGAGCCACAGGAT  74

Query   75  CAAGACAGTGGTGGACCTGGTTTCTGCAGACCTGGAAGAGGTAGCTCAGAAATGTGGCTTGTCTTACAAGGCCC  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |.|.
Sbjct   75  CAAGACAGTGGTGGACCTGGTTTCTGCAGACCTGGAAGAGGTAGCTCAGAAATGTGGCTTGTCTTACAA-GACA  147

Query  149  T---GGTTGCCCTGAGGCGGG-------------TGCTGCTGGCTCAGTTCTCGGCTTTCCC----------CG  196
            |   ||..||.||.|.|.|||             |||.||||.|||||.||        |||          ||
Sbjct  148  TGGAGGGCGCACTCAAGTGGGAACCTGGGAGGACTGCAGCTGCCTCAGGTC--------CCCGCAGGGAGATCG  213

Query  197  T-GAATGGCG-CTG--AT-CTCT------------AC---------GAGGAACTGA-AGACCTCCACTGCCATC  243
            | ||.|||.| |.|  || ||||            ||         |||||||.|| .|||.|.|.||| .||.
Sbjct  214  TGGAGTGGGGTCAGGAATGCTCTGAAGAAGGCAGGACTTGGGCATGGAGGAACAGATGGACTTTCGCTG-AATG  286

Query  244  CTGTC-----------CACTG------GCA-TTGGCA-GTCTTGATAAACTGCTTGATGCTGGTCTCTATACTG  298
            ||.||           |||||      ||| ||  || ||||||||||||||||||||||||||||||||||||
Sbjct  287  CTTTCGATGAACGAGGCACTGCGGTCAGCACTT--CACGTCTTGATAAACTGCTTGATGCTGGTCTCTATACTG  358

Query  299  GAGAAGTGACTGAAATTGTAGGAGGCCCAGGTAGCGGCAAAACTCAGGTATGTCTCTGTATGGCAGCAAATGTG  372
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  359  GAGAAGTGACTGAAATTGTAGGAGGCCCAGGTAGCGGCAAAACTCAGGTATGTCTCTGTATGGCAGCAAATGTG  432

Query  373  GCCCATGGCCTGCAGCAAAACGTCCTATATGTAGATTCCAATGGAGGGCTGACAGCTTCCCGCCTCCTCCAGCT  446
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  433  GCCCATGGCCTGCAGCAAAACGTCCTATATGTAGATTCCAATGGAGGGCTGACAGCTTCCCGCCTCCTCCAGCT  506

Query  447  GCTTCAGGCTAAAACCCAGGATGAGGAGGAACAGGCAGAAGCTCTCCGGAGGATCCAGGTGGTGCATGCATTTG  520
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  507  GCTTCAGGCTAAAACCCAGGATGAGGAGGAACAGGCAGAAGCTCTCCGGAGGATCCAGGTGGTGCATGCATTTG  580

Query  521  ACATCTTCCAGATGCTGGATGTGCTGCAGGAGCTCCGAGGCACTGTGGCCCAGCAGGTGACTGGTTCTTCAGGA  594
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  581  ACATCTTCCAGATGCTGGATGTGCTGCAGGAGCTCCGAGGCACTGTGGCCCAGCAGGTGACTGGTTCTTCAGGA  654

Query  595  ACTGTGAAGGTGGTGGTTGTGGACTCGGTCACTGCGGTGGTTTCCCCACTTCTGGGAGGTCAGCAGAGGGAAGG  668
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  655  ACTGTGAAGGTGGTGGTTGTGGACTCGGTCACTGCGGTGGTTTCCCCACTTCTGGGAGGTCAGCAGAGGGAAGG  728

Query  669  CTTGGCCTTGATGATGCAGCTGGCCCGAGAGCTGAAGACCCTGGCCCGGGACCTTGGCATGGCAGTGGTGGTGA  742
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  729  CTTGGCCTTGATGATGCAGCTGGCCCGAGAGCTGAAGACCCTGGCCCGGGACCTTGGCATGGCAGTGGTGGTGA  802

Query  743  CCAACCACATAACTCGAGACAGGGACAGCGGGAGGCTCAAACCTGCCCTCGGACGCTCCTGGAGCTTTGTGCCC  816
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  803  CCAACCACATAACTCGAGACAGGGACAGCGGGAGGCTCAAACCTGCCCTCGGACGCTCCTGGAGCTTTGTGCCC  876

Query  817  AGCACTCGGATTCTCCTGGACACCATCGAGGGAGCAGGAGCATCAGGCGGCCGGCGCATGGCGTGTCTGGCCAA  890
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  877  AGCACTCGGATTCTCCTGGACACCATCGAGGGAGCAGGAGCATCAGGCGGCCGGCGCATGGCGTGTCTGGCCAA  950

Query  891  ATCTTCCCGACAGCCAACAGGTTTCCAGGAGATGGTAGACATTGGGACCTGGGGGACCTCAGAGCAGAGTGCCA  964
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  951  ATCTTCCCGACAGCCAACAGGTTTCCAGGAGATGGTAGACATTGGGACCTGGGGGACCTCAGAGCAGAGTGCCA  1024

Query  965  CATTACAGGGTGATCAGACA  984
            ||||||||||||||||||||
Sbjct 1025  CATTACAGGGTGATCAGACA  1044

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