Nucleotide Global Alignment

Description

Query:
ccsbBroad304_01374
Subject:
NM_001251921.2
Aligned Length:
559
Identities:
411
Gaps:
71

Alignment

Query   1  ATGCGTGAGTACAAGCTAGTGGTCCTTGGTTCAGGAGGCGTTGGGAAGTCTGCTCTGACAGTTCAGTTTGTTCA  74
           |||||||||||.||||||||.||.|||||.||||||||||||||.|||||||||.||||.||.||.||||||||
Sbjct   1  ATGCGTGAGTATAAGCTAGTCGTTCTTGGCTCAGGAGGCGTTGGAAAGTCTGCTTTGACTGTACAATTTGTTCA  74

Query  75  GGGAATTTTTGTTGAAAAATATGACCCAACGATAGAAGATTCCTACAGAAAGCAAGTTGAAGTCGATTGCCAAC  148
           .|||||||||||.||||||||.||.||.||||||||||||||.||.||||||                      
Sbjct  75  AGGAATTTTTGTAGAAAAATACGATCCTACGATAGAAGATTCTTATAGAAAG----------------------  126

Query 149  AGTGTATGCTCGAAATCCTGGATACTGCAGGGACAGAGCAATTTACAGCAATGAGGGATTTGTATATGAAGAAC  222
                                              ||||||||||||||||||||||||||.||.|||||.||.
Sbjct 127  -----------------------------------GAGCAATTTACAGCAATGAGGGATTTATACATGAAAAAT  165

Query 223  GGCCAAGGTTTTGCACTAGTATATTCTATTACAGCTCAGTCCACGTTTAACGACTTACAGGACCTGAGGGAACA  296
           ||.|||||.||||||.||||.|||||.||.|||||.||||||||.||||||||.|||||.||||||||.|||||
Sbjct 166  GGACAAGGATTTGCATTAGTTTATTCCATCACAGCACAGTCCACATTTAACGATTTACAAGACCTGAGAGAACA  239

Query 297  GATTTTACGGGTTAAGGACACGGAAGATGTTCCAATGATTTTGGTTGGCAATAAATGTGACCTGGAAGATGAGC  370
           ||||.|.||.|||||.|||||.||.|||||||||||||||.|.|||||.|||||.||||||.||||||||||..
Sbjct 240  GATTCTTCGAGTTAAAGACACTGATGATGTTCCAATGATTCTTGTTGGTAATAAGTGTGACTTGGAAGATGAAA  313

Query 371  GAGTAGTTGGCAAAGAGCAGGGCCAGAATTTAGCAAGACAGTGGTGTAACTGTGCCTTTTTAGAATCTTCTGCA  444
           ||||.||.||.||.||.||.||.||.|||.||||||||||.|||...||||||||.||.|||||||||||||||
Sbjct 314  GAGTTGTAGGGAAGGAACAAGGTCAAAATCTAGCAAGACAATGGAACAACTGTGCATTCTTAGAATCTTCTGCA  387

Query 445  AAGTCAAAGATCAATGTTAATGAGATATTTTATGACCTGGTCAGACAGATAAATAGGAAAACACCAG----TGG  514
           ||.|||||.||.||||||||||||||.|||||||||||.||..|.||.||.||.||.|||||.||||    |||
Sbjct 388  AAATCAAAAATAAATGTTAATGAGATCTTTTATGACCTAGTGCGGCAAATTAACAGAAAAACTCCAGTGCCTGG  461

Query 515  AAAAGAAGAAGCCT---AAAAAGAAATCATGTCTGCTGCTC  552
                  ||||.||   ||||||..||||||||.||||||.
Sbjct 462  -------GAAGGCTCGCAAAAAGTCATCATGTCAGCTGCTT  495