Nucleotide Global Alignment

Description

• Query: ccsbBroad304_01534
• Subject: NM_001270462.3
• Aligned Length: 1125
• Identities: 690
• Gaps: 435

Alignment

Query    1  ATGGGACTCTTGGTATTTGTGCGCAATCTGCTGCTAGCCCTCTGCCTCTTTCTGGTACTGGGATTTTTGTATTA  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGGACTCTTGGTATTTGTGCGCAATCTGCTGCTAGCCCTCTGCCTCTTTCTGGTACTGGGATTTTTGTATTA  74

Query   75  TTCTGCGTGGAAGCTACACTTACTCCAGTGGGAGGAGGACTCCAATTCAGTGGTTCTTTCCTTTGACTCCGCTG  148
            ||||||||||||||||||||||||||||||||||||||||||||                              
Sbjct   75  TTCTGCGTGGAAGCTACACTTACTCCAGTGGGAGGAGGACTCCA------------------------------  118

Query  149  GACAAACACTAGGCTCAGAGTATGATCGGTTGGGCTTCCTCCTGAATCTGGACTCTAAACTGCCTGCTGAATTA  222
                              |||||||||||||||||||||||||||||||||||||||||||             
Sbjct  119  ------------------AGTATGATCGGTTGGGCTTCCTCCTGAATCTGGACTCTAAACT-------------  161

Query  223  GCCACCAAGTACGCAAACTTTTCAGAGGGAGCTTGCAAGCCTGGCTATGCTTCAGCCTTGATGACGGCCATCTT  296
                                                                                      
Sbjct  162  --------------------------------------------------------------------------  161

Query  297  CCCCCGGTTCTCCAAGCCAGCACCCATGTTCCTGGATGACTCCTTTCGCAAGTGGGCTAGAATCCGGGAGTTCG  370
                  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  162  ------GTTCTCCAAGCCAGCACCCATGTTCCTGGATGACTCCTTTCGCAAGTGGGCTAGAATCCGGGAGTTCG  229

Query  371  TGCCGCCTTTTGGGATCAAAGGTCAAGACAATCTGATCAAAGCCATCTTGTCAGTCACCAAAGAGTACCGCCTG  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  230  TGCCGCCTTTTGGGATCAAAGGTCAAGACAATCTGATCAAAGCCATCTTGTCAGTCACCAAAGAGTACCGCCTG  303

Query  445  ACCCCTGCCTTGGACAGCCTCCGCTGCCGCCGCTGCATCATCGTGGGCAATGGAGGCGTTCTTGCCAACAAGTC  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  304  ACCCCTGCCTTGGACAGCCTCCGCTGCCGCCGCTGCATCATCGTGGGCAATGGAGGCGTTCTTGCCAACAAGTC  377

Query  519  TCTGGGGTCACGAATTGACGACTATGACATTGTGGTGAGACTGAATTCAGCACCAGTGAAAGGCTTTGAGAAGG  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  378  TCTGGGGTCACGAATTGACGACTATGACATTGTGGTGAGACTGAATTCAGCACCAGTGAAAGGCTTTGAGAAGG  451

Query  593  ACGTGGGCAGCAAAACGACACTGCGCATCACCTACCCCGAGGGCGCCATGCAGCGGCCTGAGCAGTACGAGCGC  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  452  ACGTGGGCAGCAAAACGACACTGCGCATCACCTACCCCGAGGGCGCCATGCAGCGGCCTGAGCAGTACGAGCGC  525

Query  667  GATTCTCTCTTTGTCCTCGCCGGCTTCAAGTGGCAGGACTTTAAGTGGTTGAAATACATCGTCTACAAGGAGAG  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  526  GATTCTCTCTTTGTCCTCGCCGGCTTCAAGTGGCAGGACTTTAAGTGGTTGAAATACATCGTCTACAAGGAGAG  599

Query  741  AGTGAGTGCATCGGATGGCTTCTGGAAATCTGTGGCCACTCGAGTGCCCAAGGAGCCCCCTGAGATTCGAATCC  814
            |||                                                                       
Sbjct  600  AGT-----------------------------------------------------------------------  602

Query  815  TCAACCCATATTTCATCCAGGAGGCCGCCTTCACCCTCATTGGCCTGCCCTTCAACAATGGCCTCATGGGCCGG  888
                                                                                      
Sbjct  603  --------------------------------------------------------------------------  602

Query  889  GGGAACATCCCTACCCTTGGCAGTGTGGCAGTGACCATGGCACTACACGGCTGTGACGAGGTGGCAGTCGCAGG  962
                                                                                      
Sbjct  603  --------------------------------------------------------------------------  602

Query  963  ATTTGGCTATGACATGAGCACACCCAACGCACCCCTGCACTACTATGAGACCGTTCGCATGGCAGCCATCAAAG  1036
                                                                                      
Sbjct  603  --------------------------------------------------------------------------  602

Query 1037  AGTCCTGGACGCACAATATCCAGCGAGAGAAAGAGTTTCTGCGGAAGCTGGTGAAAGCTCGCGTCATCACTGAT  1110
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  603  -GTCCTGGACGCACAATATCCAGCGAGAGAAAGAGTTTCTGCGGAAGCTGGTGAAAGCTCGCGTCATCACTGAT  675

Query 1111  CTAAGCAGTGGCATC  1125
            |||||||||||||||
Sbjct  676  CTAAGCAGTGGCATC  690