Nucleotide Global Alignment

Description

• Query: ccsbBroad304_01534
• Subject: NM_001270464.3
• Aligned Length: 1136
• Identities: 535
• Gaps: 589

Alignment

Query    1  ATGGGACTCTTGGTATTTGTGCGCAATCTGCTGCTAGCCCTCTGCCTCTTTCTGGTACTGGGATTTTTGTATTA  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGGACTCTTGGTATTTGTGCGCAATCTGCTGCTAGCCCTCTGCCTCTTTCTGGTACTGGGATTTTTGTATTA  74

Query   75  TTCTGCGTGGAAGCTACACTTACTCCAGTGGGAGGAGGACTCCAATTCAGTGGTTCTTTCCTTTGACTCCGCTG  148
            ||||||||||||||||||||||||||||||||||||||||||||                              
Sbjct   75  TTCTGCGTGGAAGCTACACTTACTCCAGTGGGAGGAGGACTCCA------------------------------  118

Query  149  GACAAACACTAGGCTCAGAGTATGATCGGTTGGGCTTCCTCCTGAATCTGGACTCTAAACTGCCTGCTGAATTA  222
                              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  119  ------------------AGTATGATCGGTTGGGCTTCCTCCTGAATCTGGACTCTAAACTGCCTGCTGAATTA  174

Query  223  GCCACCAAGTACGCAAACTTTTCAGAGGGAGCTTGCAAGCCTGGCTATGCTTCAGCCTTGATGACGGCCATCTT  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  175  GCCACCAAGTACGCAAACTTTTCAGAGGGAGCTTGCAAGCCTGGCTATGCTTCAGCCTTGATGACGGCCATCTT  248

Query  297  CCCCCGGTTCTCCAAGCCAGCACCCATGTTCCTGGATGACTCCTTTCGCAAGTGGGCTAGAATCCGGGAGTTCG  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  249  CCCCCGGTTCTCCAAGCCAGCACCCATGTTCCTGGATGACTCCTTTCGCAAGTGGGCTAGAATCCGGGAGTTCG  322

Query  371  TGCCGCCTTTTGGGATCAAAGGTCAAGACAATCTGATCAAAGCCATCTTGTCAGTCACCAAAGAGTACCGCCTG  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  323  TGCCGCCTTTTGGGATCAAAGGTCAAGACAATCTGATCAAAGCCATCTTGTCAGTCACCAAAGAGTACCGCCTG  396

Query  445  ACCCCTGCCTTGGACAGCCTCCGCTGCCGCCGCTGCATCATCGTGGGCAATGGAGGCGTTCTTGCCAACAAGTC  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  397  ACCCCTGCCTTGGACAGCCTCCGCTGCCGCCGCTGCATCATCGTGGGCAATGGAGGCGTTCTTGCCAACAAGTC  470

Query  519  TCTGGGGTCACGAATTGACGACTATGACATTGTGGTGAG----------ACTGAATTCAGCACCAGTGAAAGGC  582
            |||||||||||||||||||||||||||||||||||||||          ||...||.|||  |.||.|||||..
Sbjct  471  TCTGGGGTCACGAATTGACGACTATGACATTGTGGTGAGTCCTGGACGCACAATATCCAG--CGAGAGAAAGAG  542

Query  583  TTTGAGAAGGACG-TGGGCAGCAAAACGACACTGCGCATCACCTACCCCGAGGGCGCCATGCAGCGGCCTGAGC  655
            |||..| .|||.| |||                                                         
Sbjct  543  TTTCTG-CGGAAGCTGG---------------------------------------------------------  558

Query  656  AGTACGAGCGCGATTCTCTCTTTGTCCTCGCCGGCTTCAAGTGGCAGGACTTTAAGTGGTTGAAATACATCGTC  729
                                                                                      
Sbjct  559  --------------------------------------------------------------------------  558

Query  730  TACAAGGAGAGAGTGAGTGCATCGGATGGCTTCTGGAAATCTGTGGCCACTCGAGTGCCCAAGGAGCCCCCTGA  803
                                                                                      
Sbjct  559  --------------------------------------------------------------------------  558

Query  804  GATTCGAATCCTCAACCCATATTTCATCCAGGAGGCCGCCTTCACCCTCATTGGCCTGCCCTTCAACAATGGCC  877
                                                                                      
Sbjct  559  --------------------------------------------------------------------------  558

Query  878  TCATGGGCCGGGGGAACATCCCTACCCTTGGCAGTGTGGCAGTGACCATGGCACTACACGGCTGTGACGAGGTG  951
                                                                                      
Sbjct  559  --------------------------------------------------------------------------  558

Query  952  GCAGTCGCAGGATTTGGCTATGACATGAGCACACCCAACGCACCCCTGCACTACTATGAGACCGTTCGCATGGC  1025
                                                                                      
Sbjct  559  --------------------------------------------------------------------------  558

Query 1026  AGCCATCAAAGAGTCCTGGACGCACAATATCCAGCGAGAGAAAGAGTTTCTGCGGAAGCTGGTGAAAGCTCGCG  1099
                                                                                      
Sbjct  559  --------------------------------------------------------------------------  558

Query 1100  TCATCACTGATCTAAGCAGTGGCATC  1125
                                      
Sbjct  559  --------------------------  558