Nucleotide Global Alignment

Description

• Query: ccsbBroad304_01534
• Subject: NM_001270465.2
• Aligned Length: 1139
• Identities: 532
• Gaps: 598

Alignment

Query    1  ATGGGACTCTTGGTATTTGTGCGCAATCTGCTGCTAGCCCTCTGCCTCTTTCTGGTACTGGGATTTTTGTATTA  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGGACTCTTGGTATTTGTGCGCAATCTGCTGCTAGCCCTCTGCCTCTTTCTGGTACTGGGATTTTTGTATTA  74

Query   75  TTCTGCGTGGAAGCTACACTTACTCCAGTGGGAGGAGGACTCCA--------ATTCAGTGGTTCTTTCCTTTGA  140
            ||||||||||||||||||||||||||||||||||||||||||||        |.|||           ||.|..
Sbjct   75  TTCTGCGTGGAAGCTACACTTACTCCAGTGGGAGGAGGACTCCAGTAAGTATAGTCA-----------CTCTAG  137

Query  141  CT--CCGCTGGACAAACACTAGGCT----CAGAGTATGATCGGTTGGGCTTCCTCCTGAATCTGGACTCTAAAC  208
            ||  ||.|.|||.|      ||.||    |||||||||||||||||||||||||||||||||||||||||||||
Sbjct  138  CTCACCCCAGGAGA------AGCCTGTTGCAGAGTATGATCGGTTGGGCTTCCTCCTGAATCTGGACTCTAAAC  205

Query  209  TGCCTGCTGAATTAGCCACCAAGTACGCAAACTTTTCAGAGGGAGCTTGCAAGCCTGGCTATGCTTCAGCCTTG  282
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  206  TGCCTGCTGAATTAGCCACCAAGTACGCAAACTTTTCAGAGGGAGCTTGCAAGCCTGGCTATGCTTCAGCCTTG  279

Query  283  ATGACGGCCATCTTCCCCCGGTTCTCCAAGCCAGCACCCATGTTCCTGGATGACTCCTTTCGCAAGTGGGCTAG  356
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  280  ATGACGGCCATCTTCCCCCGGTTCTCCAAGCCAGCACCCATGTTCCTGGATGACTCCTTTCGCAAGTGGGCTAG  353

Query  357  AATCCGGGAGTTCGTGCCGCCTTTTGGGATCAAAGGTCAAGACAATCTGATCAAAGCCATCTTGTCAGTCACCA  430
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  354  AATCCGGGAGTTCGTGCCGCCTTTTGGGATCAAAGGTCAAGACAATCTGATCAAAGCCATCTTGTCAGTCACCA  427

Query  431  AAGAGTACCGCCTGACCCCTGCCTTGGACAGCCTCCGCTGCCGCCGCTGCATCATCGTGGGCAATGGAGGCGTT  504
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  428  AAGAGTACCGCCTGACCCCTGCCTTGGACAGCCTCCGCTGCCGCCGCTGCATCATCGTGGGCAATGGAGGCGTT  501

Query  505  CTTGCCAACAAGTCTCTGGGGTCACGAATTGACGACTATGACATTGTGGTGAGACTGAATTCAGCACCAGTGAA  578
            |||||||||||||||||||||||||||||||||||||||||||||||||||||.                    
Sbjct  502  CTTGCCAACAAGTCTCTGGGGTCACGAATTGACGACTATGACATTGTGGTGAGG--------------------  555

Query  579  AGGCTTTGAGAAGGACGTGGGCAGCAAAACGACACTGCGCATCACCTACCCCGAGGGCGCCATGCAGCGGCCTG  652
                                                                                      
Sbjct  556  --------------------------------------------------------------------------  555

Query  653  AGCAGTACGAGCGCGATTCTCTCTTTGTCCTCGCCGGCTTCAAGTGGCAGGACTTTAAGTGGTTGAAATACATC  726
                                                                                      
Sbjct  556  --------------------------------------------------------------------------  555

Query  727  GTCTACAAGGAGAGAGTGAGTGCATCGGATGGCTTCTGGAAATCTGTGGCCACTCGAGTGCCCAAGGAGCCCCC  800
                                                                                      
Sbjct  556  --------------------------------------------------------------------------  555

Query  801  TGAGATTCGAATCCTCAACCCATATTTCATCCAGGAGGCCGCCTTCACCCTCATTGGCCTGCCCTTCAACAATG  874
                                                                                      
Sbjct  556  --------------------------------------------------------------------------  555

Query  875  GCCTCATGGGCCGGGGGAACATCCCTACCCTTGGCAGTGTGGCAGTGACCATGGCACTACACGGCTGTGACGAG  948
                                                                                      
Sbjct  556  --------------------------------------------------------------------------  555

Query  949  GTGGCAGTCGCAGGATTTGGCTATGACATGAGCACACCCAACGCACCCCTGCACTACTATGAGACCGTTCGCAT  1022
                                                                                      
Sbjct  556  --------------------------------------------------------------------------  555

Query 1023  GGCAGCCATCAAAGAGTCCTGGACGCACAATATCCAGCGAGAGAAAGAGTTTCTGCGGAAGCTGGTGAAAGCTC  1096
                                                                                      
Sbjct  556  --------------------------------------------------------------------------  555

Query 1097  GCGTCATCACTGATCTAAGCAGTGGCATC  1125
                                         
Sbjct  556  -----------------------------  555