Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_01534
- Subject:
- NR_073017.3
- Aligned Length:
- 2254
- Identities:
- 1034
- Gaps:
- 1220
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCTGCGTCCCCACTATGGCGGCGCCCATGCAGCCCAGCGCGTTGTGGGCTCCCGCCGGGGTCCCCCGCGGCTGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGCCGCCGCCTACGCCGCTGCCTCCGCCTTCCTGCCCCGCGTCGGGCCGGGCGCCACCTCCCCCCTGCCTCCCT 148
Query 1 ----------------------------------------ATGGGACTCTTGGTATTTGTGCGCAATCTGCTGC 34
||||||||||||||||||||||||||||||||||
Sbjct 149 CTCCGCTGTGGTCATTTAGGAAATCGTAAATCATGTGAAGATGGGACTCTTGGTATTTGTGCGCAATCTGCTGC 222
Query 35 TAGCCCTCTGCCTCTTTCTGGTACTGGGATTTTTGTATTATTCTGCGTGGAAGCTACACTTACTCCAGTGGGAG 108
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TAGCCCTCTGCCTCTTTCTGGTACTGGGATTTTTGTATTATTCTGCGTGGAAGCTACACTTACTCCAGTGGGAG 296
Query 109 GAGGACTCCAATTCAGTGGTTCTTTCCTTTGACTCCGCTGGACAAACACTAGGCTCAGAGTATGATCGGTTGGG 182
||||||||||
Sbjct 297 GAGGACTCCA---------------------------------------------------------------- 306
Query 183 CTTCCTCCTGAATCTGGACTCTAAACTGCCTGCTGAATTAGCCACCAAGTACGCAAACTTTTCAGAGGGAGCTT 256
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 307 ---------------------------GCCTGCTGAATTAGCCACCAAGTACGCAAACTTTTCAGAGGGAGCTT 353
Query 257 GCAAGCCTGGCTATGCTTCAGCCTTGATGACGGCCATCTTCCCCCGGTTCTCCAAGCCAGCACCCATGTTCCTG 330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 354 GCAAGCCTGGCTATGCTTCAGCCTTGATGACGGCCATCTTCCCCCGGTTCTCCAAGCCAGCACCCATGTTCCTG 427
Query 331 GATGACTCCTTTCGCAAGTGGGCTAGAATCCGGGAGTTCGTGCCGCCTTTTGGGATCAAAGGTCAAGACAATCT 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 428 GATGACTCCTTTCGCAAGTGGGCTAGAATCCGGGAGTTCGTGCCGCCTTTTGGGATCAAAGGTCAAGACAATCT 501
Query 405 GATCAAAGCCATCTTGTCAGTCACCAAAGAGTACCGCCTGACCCCTGCCTTGGACAGCCTCCGCTGCCGCCGCT 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 502 GATCAAAGCCATCTTGTCAGTCACCAAAGAGTACCGCCTGACCCCTGCCTTGGACAGCCTCCGCTGCCGCCGCT 575
Query 479 GCATCATCGTGGGCAATGGAGGCGTTCTTGCCAACAAGTCTCTGGGGTCACGAATTGACGACTATGACATTGTG 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 576 GCATCATCGTGGGCAATGGAGGCGTTCTTGCCAACAAGTCTCTGGGGTCACGAATTGACGACTATGACATTGTG 649
Query 553 GTGAGACTGAATTCAGCACCAGTGAAAGGCTTTGAGAAGGACGTGGGCAGCAAAACGACACTGCGCATCACCTA 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 650 GTGAGACTGAATTCAGCACCAGTGAAAGGCTTTGAGAAGGACGTGGGCAGCAAAACGACACTGCGCATCACCTA 723
Query 627 CCCCGAGGGCGCCATGCAGCGGCCTGAGCAGTACGAGCGCGATTCTCTCTTTGTCCTCGCCGGCTTCAAGTGGC 700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 724 CCCCGAGGGCGCCATGCAGCGGCCTGAGCAGTACGAGCGCGATTCTCTCTTTGTCCTCGCCGGCTTCAAGTGGC 797
Query 701 AGGACTTTAAGTGGTTGAAATACATCGTCTACAAGGAGAGAGTGAGTGCATCGGATGGCTTCTGGAAATCTGTG 774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 798 AGGACTTTAAGTGGTTGAAATACATCGTCTACAAGGAGAGAGTGAGTGCATCGGATGGCTTCTGGAAATCTGTG 871
Query 775 GCCACTCGAGTGCCCAAGGAGCCCCCTGAGATTCGAATCCTCAACCCATATTTCATCCAGGAGGCCGCCTTCAC 848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 872 GCCACTCGAGTGCCCAAGGAGCCCCCTGAGATTCGAATCCTCAACCCATATTTCATCCAGGAGGCCGCCTTCAC 945
Query 849 CCTCATTGGCCTGCCCTTCAACAATGGCCTCATGGGCCGGGGGAACATCCCTACCCTTGGCAGTGTGGCAGTGA 922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 946 CCTCATTGGCCTGCCCTTCAACAATGGCCTCATGGGCCGGGGGAACATCCCTACCCTTGGCAGTGTGGCAGTGA 1019
Query 923 CCATGGCACTACACGGCTGTGACGAGGTGGCAGTCGCAGGATTTGGCTATGACATGAGCACACCCAACGCACCC 996
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1020 CCATGGCACTACACGGCTGTGACGAGGTGGCAGTCGCAGGATTTGGCTATGACATGAGCACACCCAACGCACCC 1093
Query 997 CTGCACTACTATGAGACCGTTCGCATGGCAGCCATCAAAGAGTCCTGGACGCACAATATCCAGCGAGAGAAAGA 1070
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1094 CTGCACTACTATGAGACCGTTCGCATGGCAGCCATCAAAGAGTCCTGGACGCACAATATCCAGCGAGAGAAAGA 1167
Query 1071 GTTTCTGCGGAAGCTGGTGAAAGCTCGCGTCATCACTGATCTAAGCAGTGGCATC------------------- 1125
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1168 GTTTCTGCGGAAGCTGGTGAAAGCTCGCGTCATCACTGATCTAAGCAGTGGCATCTGAGTGGGCCCAGCACATG 1241
Query 1126 -------------------------------------------------------------------------- 1125
Sbjct 1242 GCCATAGAGGCCCAGGCACCACCAGGAGCAGCAGCCAGCACCACCTACACAGGAGTCTTCAGACCCAGAGAAGG 1315
Query 1126 -------------------------------------------------------------------------- 1125
Sbjct 1316 ACGGTGCCAAGGGCCCCAGGGGCAGCAAGGCCTTGGTGGAGCAGCCAGAGCTGTGCCTGCTCAGCAGCCAGTCT 1389
Query 1126 -------------------------------------------------------------------------- 1125
Sbjct 1390 CAGAGACCAGCACTCAGCCTCATTCAGCATGGGTCCTTGATGCCAGAGGGCCAGCAGGCTCCTGGCTGTGCCCA 1463
Query 1126 -------------------------------------------------------------------------- 1125
Sbjct 1464 GCAGGCCCAGCATGCAGGTGGTGGGACACTGGGCAGCAAGGCTGCTGCCGGAATCACTTCTCCAATCAGTGTTT 1537
Query 1126 -------------------------------------------------------------------------- 1125
Sbjct 1538 GGTGTATTATCATTTTGTGAATTTGGGTAGGGGGGAGGGTAGGGATAATTTATTTTTAAATAAGGTTGGAGATG 1611
Query 1126 -------------------------------------------------------------------------- 1125
Sbjct 1612 TCAAGTTGGGTTCACTTGCCATGCAGGAAGAGGCCCACTAGAGGGCCCATCAGGCAGTGTTACCTGTTAGCTCC 1685
Query 1126 -------------------------------------------------------------------------- 1125
Sbjct 1686 CTGTGGGGCAGGAGTGCCAGGACCAGCCTGTACCTTGCTGTGGGGCTACAGGATGGTGGGCAGGATCTCAAGCC 1759
Query 1126 -------------------------------------------------------------------------- 1125
Sbjct 1760 AGCCCCCTCCAGCTCATGACACTGTTTGGCCTTTCTTGGGGAGAAGGCGGGGTATTCCCACTCACCAGCCCTAG 1833
Query 1126 -------------------------------------------------------------------------- 1125
Sbjct 1834 CTGTCCCATGGGGAAACCCTGGAGCCATCCCTTCGGAGCCAACAAGACCGCCCCAGGGCTATAGCAGAAAGAAC 1907
Query 1126 -------------------------------------------------------------------------- 1125
Sbjct 1908 TTTAAAGCTCAGGAGGGTGACGCCCAGCTCCGCCTGCTGGGAAGAGCTCCCCTCCACAGCTGCAGCTGATCCAT 1981
Query 1126 -------------------------------------------------------------------------- 1125
Sbjct 1982 AGGACTACCGCAGGCCCGGACTCACCAACTTGCCACATGTTCTAGGTTTCAGCAACAAGACTGCCAGGTGGTTG 2055
Query 1126 -------------------------------------------------------------------------- 1125
Sbjct 2056 GGTTCTGCCTTTAGCCTGGACCAAAGGGAAGTGAGGCCCAAGGAGCTTACCCAAGCTGTGGCAGCCGTCCCAGG 2129
Query 1126 ---------------------------------- 1125
Sbjct 2130 CCACCCCCATGGAAGCAATAAAGCTCTTCCCTGA 2163