Nucleotide Global Alignment

Description

Query:
ccsbBroad304_01534
Subject:
NR_146867.2
Aligned Length:
2482
Identities:
1125
Gaps:
1357

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCTGCGTCCCCACTATGGCGGCGCCCATGCAGCCCAGCGCGTTGTGGGCTCCCGCCGGGGTCCCCCGCGGCTGT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CGCCGCCGCCTACGCCGCTGCCTCCGCCTTCCTGCCCCGCGTCGGGCCGGGCGCCACCTCCCCCCTGCCTCCCT  148

Query    1  ----------------------------------------ATGGGACTCTTGGTATTTGTGCGCAATCTGCTGC  34
                                                    ||||||||||||||||||||||||||||||||||
Sbjct  149  CTCCGCTGTGGTCATTTAGGAAATCGTAAATCATGTGAAGATGGGACTCTTGGTATTTGTGCGCAATCTGCTGC  222

Query   35  TAGCCCTCTGCCTCTTTCTGGTACTGGGATTTTTGTATTATTCTGCGTGGAAGCTACACTTACTCCAGTGGGAG  108
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  TAGCCCTCTGCCTCTTTCTGGTACTGGGATTTTTGTATTATTCTGCGTGGAAGCTACACTTACTCCAGTGGGAG  296

Query  109  GAGGACTCCAATTCAGTGGTTCTTTCCTTTGACTCCGCTGGACAAACACTAGGCTCAGAGTATGATCGGTTGGG  182
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GAGGACTCCAATTCAGTGGTTCTTTCCTTTGACTCCGCTGGACAAACACTAGGCTCAGAGTATGATCGGTTGGG  370

Query  183  CTTCCTCCTGAATCTGGACTCTAAACTGCCTGCTGAATTAGCCACCAAGTACGCAAACTTTTCAGAGGGAGCTT  256
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  CTTCCTCCTGAATCTGGACTCTAAACTGCCTGCTGAATTAGCCACCAAGTACGCAAACTTTTCAGAGGGAGCTT  444

Query  257  GCAAGCCTGGCTATGCTTCAGCCTTGATGACGGCCATCTTCCCCCGGTTCTCCAAGCCAGCACCCATGTTCCTG  330
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GCAAGCCTGGCTATGCTTCAGCCTTGATGACGGCCATCTTCCCCCGGTTCTCCAAGCCAGCACCCATGTTCCTG  518

Query  331  GATGACTCCTTTCGCAAGTGGGCTAGAATCCGGGAGTTCGTGCCGCCTTTTGGGATCAAAGGTCAAGACAATCT  404
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GATGACTCCTTTCGCAAGTGGGCTAGAATCCGGGAGTTCGTGCCGCCTTTTGGGATCAAAGGTCAAGACAATCT  592

Query  405  GATCAAAGCCATCTTGTCAGTCACCAAAGAGTACCGCCTGACCCCTGCCTTGGACAGCCTCCGCTGCCGCCGCT  478
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GATCAAAGCCATCTTGTCAGTCACCAAAGAGTACCGCCTGACCCCTGCCTTGGACAGCCTCCGCTGCCGCCGCT  666

Query  479  GCATCATCGTGGGCAATGGAGGCGTTCTTGCCAACAAGTCTCTGGGGTCACGAATTGACGACTATGACATTGTG  552
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GCATCATCGTGGGCAATGGAGGCGTTCTTGCCAACAAGTCTCTGGGGTCACGAATTGACGACTATGACATTGTG  740

Query  553  GTG--------------------------------AGACTGAATTCAGCACCAGTGAAAGGCTTTGAGAAGGAC  594
            |||                                |||||||||||||||||||||||||||||||||||||||
Sbjct  741  GTGAGGCCCAGGCTCTGAGTGGGCCTGCTCTCTGTAGACTGAATTCAGCACCAGTGAAAGGCTTTGAGAAGGAC  814

Query  595  GTGGGCAGCAAAACGACACTGCGCATCACCTACCCCGAGGGCGCCATGCAGCGGCCTGAGCAGTACGAGCGCGA  668
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  GTGGGCAGCAAAACGACACTGCGCATCACCTACCCCGAGGGCGCCATGCAGCGGCCTGAGCAGTACGAGCGCGA  888

Query  669  TTCTCTCTTTGTCCTCGCCGGCTTCAAGTGGCAGGACTTTAAGTGGTTGAAATACATCGTCTACAAGGAGAGAG  742
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  TTCTCTCTTTGTCCTCGCCGGCTTCAAGTGGCAGGACTTTAAGTGGTTGAAATACATCGTCTACAAGGAGAGAG  962

Query  743  TGAGTGCATCGGATGGCTTCTGGAAATCTGTGGCCACTCGAGTGCCCAAGGAGCCCCCTGAGATTCGAATCCTC  816
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  TGAGTGCATCGGATGGCTTCTGGAAATCTGTGGCCACTCGAGTGCCCAAGGAGCCCCCTGAGATTCGAATCCTC  1036

Query  817  AACCCATATTTCATCCAGGAGGCCGCCTTCACCCTCATTGGCCTGCCCTTCAACAATGGCCTCATGGGCCGGGG  890
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  AACCCATATTTCATCCAGGAGGCCGCCTTCACCCTCATTGGCCTGCCCTTCAACAATGGCCTCATGGGCCGGGG  1110

Query  891  GAACATCCCTACCCTTGGCAGTGTGGCAGTGACCATGGCACTACACGGCTGTGACGAGGTGGCAGTCGCAGGAT  964
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  GAACATCCCTACCCTTGGCAGTGTGGCAGTGACCATGGCACTACACGGCTGTGACGAGGTGGCAGTCGCAGGAT  1184

Query  965  TTGGCTATGACATGAGCACACCCAACGCACCCCTGCACTACTATGAGACCGTTCGCATGGCAGCCATCAAAGAG  1038
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  TTGGCTATGACATGAGCACACCCAACGCACCCCTGCACTACTATGAGACCGTTCGCATGGCAGCCATCAAAGAG  1258

Query 1039  --------------------------------------------------------------------------  1038
                                                                                      
Sbjct 1259  CCAAGACCCCATGTGGAAAATCTGAACCCTTCTGAACTCCGCTTGCCACACTTCTGCTTTGACCACCAGCCTTC  1332

Query 1039  --------------------------------------------------------------------------  1038
                                                                                      
Sbjct 1333  CACTGATCCCAGCCTGAAACCTGGAAATCTTGGGCCAGTTCTTCAACAGCTTCTCTGCTGCTACATCTGGGTGA  1406

Query 1039  ------------------------------------------------TCCTGGACGCACAATATCCAGCGAGA  1064
                                                            ||||||||||||||||||||||||||
Sbjct 1407  TGGGAGGTTGTTGGAGGGAACCTCCCATCTGTGCAGATTCCTGTTTCTTCCTGGACGCACAATATCCAGCGAGA  1480

Query 1065  GAAAGAGTTTCTGCGGAAGCTGGTGAAAGCTCGCGTCATCACTGATCTAAGCAGTGGCATC-------------  1125
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||             
Sbjct 1481  GAAAGAGTTTCTGCGGAAGCTGGTGAAAGCTCGCGTCATCACTGATCTAAGCAGTGGCATCTGAGTGGGCCCAG  1554

Query 1126  --------------------------------------------------------------------------  1125
                                                                                      
Sbjct 1555  CACATGGCCATAGAGGCCCAGGCACCACCAGGAGCAGCAGCCAGCACCACCTACACAGGAGTCTTCAGACCCAG  1628

Query 1126  --------------------------------------------------------------------------  1125
                                                                                      
Sbjct 1629  AGAAGGACGGTGCCAAGGGCCCCAGGGGCAGCAAGGCCTTGGTGGAGCAGCCAGAGCTGTGCCTGCTCAGCAGC  1702

Query 1126  --------------------------------------------------------------------------  1125
                                                                                      
Sbjct 1703  CAGTCTCAGAGACCAGCACTCAGCCTCATTCAGCATGGGTCCTTGATGCCAGAGGGCCAGCAGGCTCCTGGCTG  1776

Query 1126  --------------------------------------------------------------------------  1125
                                                                                      
Sbjct 1777  TGCCCAGCAGGCCCAGCATGCAGGTGGTGGGACACTGGGCAGCAAGGCTGCTGCCGGAATCACTTCTCCAATCA  1850

Query 1126  --------------------------------------------------------------------------  1125
                                                                                      
Sbjct 1851  GTGTTTGGTGTATTATCATTTTGTGAATTTGGGTAGGGGGGAGGGTAGGGATAATTTATTTTTAAATAAGGTTG  1924

Query 1126  --------------------------------------------------------------------------  1125
                                                                                      
Sbjct 1925  GAGATGTCAAGTTGGGTTCACTTGCCATGCAGGAAGAGGCCCACTAGAGGGCCCATCAGGCAGTGTTACCTGTT  1998

Query 1126  --------------------------------------------------------------------------  1125
                                                                                      
Sbjct 1999  AGCTCCCTGTGGGGCAGGAGTGCCAGGACCAGCCTGTACCTTGCTGTGGGGCTACAGGATGGTGGGCAGGATCT  2072

Query 1126  --------------------------------------------------------------------------  1125
                                                                                      
Sbjct 2073  CAAGCCAGCCCCCTCCAGCTCATGACACTGTTTGGCCTTTCTTGGGGAGAAGGCGGGGTATTCCCACTCACCAG  2146

Query 1126  --------------------------------------------------------------------------  1125
                                                                                      
Sbjct 2147  CCCTAGCTGTCCCATGGGGAAACCCTGGAGCCATCCCTTCGGAGCCAACAAGACCGCCCCAGGGCTATAGCAGA  2220

Query 1126  --------------------------------------------------------------------------  1125
                                                                                      
Sbjct 2221  AAGAACTTTAAAGCTCAGGAGGGTGACGCCCAGCTCCGCCTGCTGGGAAGAGCTCCCCTCCACAGCTGCAGCTG  2294

Query 1126  --------------------------------------------------------------------------  1125
                                                                                      
Sbjct 2295  ATCCATAGGACTACCGCAGGCCCGGACTCACCAACTTGCCACATGTTCTAGGTTTCAGCAACAAGACTGCCAGG  2368

Query 1126  --------------------------------------------------------------------------  1125
                                                                                      
Sbjct 2369  TGGTTGGGTTCTGCCTTTAGCCTGGACCAAAGGGAAGTGAGGCCCAAGGAGCTTACCCAAGCTGTGGCAGCCGT  2442

Query 1126  ----------------------------------------  1125
                                                    
Sbjct 2443  CCCAGGCCACCCCCATGGAAGCAATAAAGCTCTTCCCTGA  2482

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