Nucleotide Global Alignment

Description

• Query: ccsbBroad304_01616
• Subject: XM_017318108.1
• Aligned Length: 960
• Identities: 505
• Gaps: 402

Alignment

Query   1  ATGAAGGACCGTCTGGAGCAGCTGAAGGCCAAGCAGCTGACACAGGATGATGATACTGATGCGGTTGAGATTGC  74
                                                                                     
Sbjct   1  --------------------------------------------------------------------------  0

Query  75  TATCGACAACACGGCTTTTATGGACGAGTTCTTTTCTGAGATTGAGGAAACTCGGCTTAACATTGACAAGATCT  148
                                                                                     
Sbjct   1  --------------------------------------------------------------------------  0

Query 149  CAGAACATGTAGAGGAGGCTAAGAAACTCTACAGTATCATTCTCTCTGCACCGATTCCAGAGCCAAAAACCAAG  222
                                                                                     
Sbjct   1  --------------------------------------------------------------------------  0

Query 223  GATGACCTAGAGCAGCTCACGACTGAGATTAAGAAAAGGGCCAACAACGTCCGGAACAAACTGAAGAGCATGGA  296
                                                                                |||||
Sbjct   1  ---------------------------------------------------------------------ATGGA  5

Query 297  GAAGCATATTGAAGAAGATGAGGTCAGGTCATCGGCAGACCTTCGGATTCGGAAATCCCAGCACTCTGTCCTTT  370
           ||||||.|||||.|||||||||||..|||||||.||||||||||||||.||.||.|||||||||||.|||||.|
Sbjct   6  GAAGCACATTGAGGAAGATGAGGTTCGGTCATCTGCAGACCTTCGGATACGAAAGTCCCAGCACTCCGTCCTCT  79

Query 371  CTCGGAAGTTTGTGGAGGTGATGACCAAATACAATGAAGCTCAAGTGGACTTCCGAGAACGCAGCAAAGGGCGA  444
           |.|||||||||||||||||||||||.||.||||||||.|||||.|||||||||||.|||||||||||||||||.
Sbjct  80  CCCGGAAGTTTGTGGAGGTGATGACAAAGTACAATGAGGCTCAGGTGGACTTCCGTGAACGCAGCAAAGGGCGC  153

Query 445  ATCCAGCGGCAGCTCGAAATTACTGGCAAAAAGACAACCGATGAGGAGCTGGAGGAGATGTTGGAGAGTGGCAA  518
           |||||.||||||||.||||||||||||||.||||||||.||||||||||||||.||||||||||||||||||||
Sbjct 154  ATCCAACGGCAGCTTGAAATTACTGGCAAGAAGACAACAGATGAGGAGCTGGAAGAGATGTTGGAGAGTGGCAA  227

Query 519  CCCGGCCATCTTCACTTCTGGGATCATTGACTCACAGATTTCCAAGCAAGCCCTCAGTGAGATTGAGGGACGAC  592
           |||.|||||||||||||||||||||||||||||.|||||||||||||||||||||||.|||||||||||.||.|
Sbjct 228  CCCAGCCATCTTCACTTCTGGGATCATTGACTCCCAGATTTCCAAGCAAGCCCTCAGCGAGATTGAGGGTCGGC  301

Query 593  ACAAGGACATTGTGAGGCTGGAGAGCAGCATCAAGGAGCTTCACGACATGTTTATGGACATCGCCATGCTGGTG  666
           ||||||||||.||.||||||||||||||||||||||||||.||.||||||||||||||||||||||||||||||
Sbjct 302  ACAAGGACATCGTAAGGCTGGAGAGCAGCATCAAGGAGCTCCATGACATGTTTATGGACATCGCCATGCTGGTG  375

Query 667  GAGAATCAGGGTGAGATGTTAGATAACATAGAGTTGAATGTCATGCACACAGTGGACCACGTGGAGAAGGCACG  740
           ||.||||||||.|||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct 376  GAAAATCAGGGGGAGATGTTAGATAACATAGAGTTGAATGTCATGCACACAGTGGACCATGTGGAGAAGGCACG  449

Query 741  AGATGAAACGAAAAAAGCTGTGAAATACCAGAGTCAGGCCCGGAAGAA----ATTGATAATTATCA-------T  803
           .||||||||.||||.|||..||||.||.|||.|||||||.||||||||    .||        |||       |
Sbjct 450  GGATGAAACTAAAAGAGCCATGAAGTATCAGGGTCAGGCTCGGAAGAACCAGCTT--------TCACTCCAGCT  515

Query 804  TG---TG------CTAGT----------------AGTTGTG-------TTGCTGGGCAT---------------  830
           ||   ||      ||.||                |||| ||       |..|||.|.||               
Sbjct 516  TGGCCTGACCACTCTTGTCTCCAGACGGGAACAGAGTT-TGAAAGGCCTCCCTGAGAATGAGGGGGTACCTGTT  588

Query 831  --TTTAGCATTGATTA---------TTGGACTTTCCGTTGGGCT-----------------------GAAT-  867
             ||||  .||..|||         ||||||.|       ||||                       |||| 
Sbjct 589  ACTTTA--TTTCCTTATAACCATCCTTGGACCT-------GGCTCAGCAAACAATCTACCCCCAGAAGAATC  651