Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_01697
- Subject:
- NR_105034.2
- Aligned Length:
- 3973
- Identities:
- 489
- Gaps:
- 3463
Alignment
Query 1 ATGGAC--CGCGGCGAGCAAGGTCTGCTGAGAACAGACCCAGTC-CCTGAGGA----AGGAGAAGATGTTGCTG 67
||| ||||| .|||| ||.|.||| |||||.||.| |||
Sbjct 1 ---GACTTCGCGG--------------------------GAGTCGCCGGCGGAGGCGAGGAGGAGCT----CTG 41
Query 68 C-----------CACGATCAGTGCCACAGAGACCCTCT-------------CGGAAGAGGAGCAGGA-----AG 112
| ..|||||.|.||| |.|||...|| |.|.|||||| ||.|| .|
Sbjct 42 CGCGGCGCGGCGGGCGATCCGAGCC---GGGACGGGCTGCAGGCGGGGGTGCTGCAGAGGA-CACGAGGCGGCG 111
Query 113 AGCTAAGAAGAGAACTTGCA-----------AAGGTAGAAGAAGAAATCCAGACTCTGTCTCAAGTGTTAGCAG 175
.||| |.|| ||.||.| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 112 GGCT--GGAG---ACATGGACCGCGGCGAGCAAGGTAGAAGAAGAAATCCAGACTCTGTCTCAAGTGTTAGCAG 180
Query 176 CAAAAGAGAAGCATCTAGCAGAGATCAAGCGGAAACTTGGAATCAATTCTCTACAGGAACTAAAACAGAACATT 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 CAAAAGAGAAGCATCTAGCAGAGATCAAGCGGAAACTTGGAATCAATTCTCTACAGGAACTAAAACAGAACATT 254
Query 250 GCCAAAGGGTGGCAAGACGTGACAGCAACATCTGCTTACAAGAAGACATCTGAAACCTTATCCCAGGCTGGACA 323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 255 GCCAAAGGGTGGCAAGACGTGACAGCAACATCTGCTTACAAGAAGACATCTGAAACCTTATCCCAGGCTGGACA 328
Query 324 GAAGGCCTCAGCTGCTTTTTCGTCTGTTGGCTCAGTCATCACCAAAAAGCTGGAAGATGTAAAAAACTCCCCAA 397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 329 GAAGGCCTCAGCTGCTTTTTCGTCTGTTGGCTCAGTCATCACCAAAAAGCTGGAAGATGTAAAAAACTCCCCAA 402
Query 398 CTTTTAAATCATTTGAAGAAAAGGTCGAAAACTTAAAGTCTAAAGTAGGGGGAACCAAGCCTGCTGGTGGTGAT 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 403 CTTTTAAATCATTTGAAGAAAAGGTCGAAAACTTAAAGTCTAAAGTAGGGGGAACCAAGCCTGCTGGTGGTGAT 476
Query 472 TTTGGAGAAGTCTTGAATTCGGCTGCAAATGCTAGTGCCACCACCACGGAGCCTCTTCCAGAAAAGACACAGGA 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 477 TTTGGAGAAGTCTTGAATTCGGCTGCAAATGCTAGTGCCACCACCACGGAGCCTCTTCCAGAAAAGACACAGGA 550
Query 546 GAGCCTG------------------------------------------------------------------- 552
|||||||
Sbjct 551 GAGCCTGTGAGATTCCTACCTTTGTTCTGCTACCCACTGCCAGATGCTGCAAGCGAGGTCCAAGCACATCTTGT 624
Query 553 -------------------------------------------------------------------------- 552
Sbjct 625 CAACATGCATTGCCATGAATTTCTACCAGATGTGCTTTTATTTAGCTTTACATATTCCTTTGACCAAATAGTTT 698
Query 553 -------------------------------------------------------------------------- 552
Sbjct 699 GTGGGTTAAACAAAATGAAAATATCTTCACCTCTATTCTTGGGAAACACCCTTTAGTGTACATTTATGTTCCTT 772
Query 553 -------------------------------------------------------------------------- 552
Sbjct 773 TATTTAGGAAACACCATTATAAAAACACTTATAGTAAATGGGGACATTCACTATAATGATCTAAGAAGCTACAG 846
Query 553 -------------------------------------------------------------------------- 552
Sbjct 847 ATTGTCATAGTTGTTTTCCTGCTTTACAAAATTGCTCCAGATCTGGAATGCCAGTTTGACCTTTGTCTTCTATA 920
Query 553 -------------------------------------------------------------------------- 552
Sbjct 921 ATATTTCCTTTTTTTCCCCTCTTTGAATCTCTGTATATTTGATTCTTAACTAAAATTGTTCTCTTAAATATTCT 994
Query 553 -------------------------------------------------------------------------- 552
Sbjct 995 GAATCCTGGTAATTAAAAGTTTGGGTGTATTTTCTTTACCTCCAAGGAAAGAACTACTAGCTACAAAAAATATT 1068
Query 553 -------------------------------------------------------------------------- 552
Sbjct 1069 TTGGAATAAGCATTGTTTTGGTATAAGGTACATATTTTGGTTGAAGACACCAGACTGAAGTAAACAGCTGTGCA 1142
Query 553 -------------------------------------------------------------------------- 552
Sbjct 1143 TCCAATTTATTATAGTTTTGTAAGTAACAATATGTAATCAAACTTCTAGGTGACTTGAGAGTGGAACCTCCTAT 1216
Query 553 -------------------------------------------------------------------------- 552
Sbjct 1217 ATCATTATTTAGCACCGTTTGTGACAGTAACCATTTCAGTGTATTGTTTATTATACCACTTATATCAACTTATT 1290
Query 553 -------------------------------------------------------------------------- 552
Sbjct 1291 TTTCACCAGGTTAAAATTTTAATTTCTACAAAATAACATTCTGAATCAAGCACACTGTATGTTCAGTAGGTTGA 1364
Query 553 -------------------------------------------------------------------------- 552
Sbjct 1365 ACTATGAACACTGTCATCAATGTTCAGTTCAAAAGCCTGAAAGTTTAGATCTAGAAGCTGGTAAAAATGACAAT 1438
Query 553 -------------------------------------------------------------------------- 552
Sbjct 1439 ATCAATCACATTAGGGGAACCATTGTTGTCTTCACTTAATCCATTTAGCACTATTTAAAATAAGCACACCAAGT 1512
Query 553 -------------------------------------------------------------------------- 552
Sbjct 1513 TATATGACTAATATAACTTGAAAATTTTTTATACTGAGGGGTTGGTGATAACTCTTGAGGATGTAATGCATTAA 1586
Query 553 -------------------------------------------------------------------------- 552
Sbjct 1587 TAAAAATCAACTCATCATTTTCTACTTGTTTTCAATGTGTTGGAAACTGTAAAATGATACTGTAGAACCTGTCT 1660
Query 553 -------------------------------------------------------------------------- 552
Sbjct 1661 CCTACTTTGAAAACTGAATGTCAGGGCTGAGTGAATCAAAGTGTCTAGACATATTTGCATAGAGGCCAAGGTAT 1734
Query 553 -------------------------------------------------------------------------- 552
Sbjct 1735 TCTATTCTAATAACTGCTTACTCAACACTACCACCTTTTCCTTATACTGTATATGATTATGGCCTACAATGTTG 1808
Query 553 -------------------------------------------------------------------------- 552
Sbjct 1809 TATTTGTTATTTATTAAATTGTGATTGTTTTATTATTGTTTATGCCAAATGTTAACTGCCAAGCTTGGAGTGAC 1882
Query 553 -------------------------------------------------------------------------- 552
Sbjct 1883 CTAAAGCATTTTTTAAAAGCATGGCTAGATTTACTTCAGTATAAATTATCTTATGAAAACCAAATTTTAAAAGC 1956
Query 553 -------------------------------------------------------------------------- 552
Sbjct 1957 CACAGGTGTTGATTGTTATAAAATAACATGCTGCCATTCTTGATTGCTAGAGTTTTTGTTAGTACTTTGGATGC 2030
Query 553 -------------------------------------------------------------------------- 552
Sbjct 2031 AATTAAAACTATGTGCTATCACATGTGAAAAGCTTAATAAATTCCATCTATCAGTAGTATAGGTCTCAATATTT 2104
Query 553 -------------------------------------------------------------------------- 552
Sbjct 2105 ATTATGAGACCAGTGGTCTGGAAACAGCTTGTTGTACCGAATCAACTGGAGTCTATGCTTAAAAAAAAAAAATT 2178
Query 553 -------------------------------------------------------------------------- 552
Sbjct 2179 TTTTTTTAACCATCCTTAAATTATTGCTTAATGGTATCATATTAACATATTCTAAATAAGGGCTTTAAGGCACA 2252
Query 553 -------------------------------------------------------------------------- 552
Sbjct 2253 GGCTGTTGAAGCATTTTCTCAGAGGAGTGGATCTGTAGAAGTCTGTCTTTCTATAGAAATATTGTGCTTACTCA 2326
Query 553 -------------------------------------------------------------------------- 552
Sbjct 2327 AGTGTTAAATTATTTTTTCTATGAACTAGTCTACTTCTTAAAATTCAAACATATTCTTTTGATCACATTGTTTC 2400
Query 553 -------------------------------------------------------------------------- 552
Sbjct 2401 TTGAGCATCCTGCCCTGCTACTAACTTTTCAACAAGGCAAAATGGAGTAAAGTGGCAATTTCTTTAGATGAGTG 2474
Query 553 -------------------------------------------------------------------------- 552
Sbjct 2475 AAATACCCTCAAGTCTCTTTTCTGCCCAAAAAGGGAAAAGTGATAGAAATGGGGGTGGCAAGTGGGGTGAGTGG 2548
Query 553 -------------------------------------------------------------------------- 552
Sbjct 2549 ATGAAGGTGGGTATTGGGGGTGGCTGTGAAAGAAAATAATGGAGAATCACTTTTCTAGACATCTACCTATACTT 2622
Query 553 -------------------------------------------------------------------------- 552
Sbjct 2623 AATCTAAGAAACAAAGTAATCTACTGTAAAGTACTCTGCCCCTTGAAAGAAGTATTAAAAAGAGTGAGGATGGA 2696
Query 553 -------------------------------------------------------------------------- 552
Sbjct 2697 TTTAGAAAAAAACATGAATTTAGAAATATTCAAAATGGTTTTTGTGGCAGATTCAATATTATGAATTCACAGAT 2770
Query 553 -------------------------------------------------------------------------- 552
Sbjct 2771 ATTTAAAGAATGAGAAACATAGTAATTAGTAGAAATGCCAGAAACAGTTCCTGGTTCCTCTTGTGTTTGACACT 2844
Query 553 -------------------------------------------------------------------------- 552
Sbjct 2845 AAGAAAATAGCAAGAGTGTGAAATCTCAGATACTTATGAAATCTCACAGATGTAAGGACTCAAGTGTAGAAGAA 2918
Query 553 -------------------------------------------------------------------------- 552
Sbjct 2919 AATATCCCCTTCTTACAAAAAGAAATGTCAATTTATGGAGTTTGTGGGAAATAGGGCAAGAATTCTTATGCTTA 2992
Query 553 -------------------------------------------------------------------------- 552
Sbjct 2993 TGAGAGCCAAGTAGTCAGTGGAAGAGAGTAGAGCTCAAAACTGGATTATCACCTTAGCAACTTAGAATAGTTTG 3066
Query 553 -------------------------------------------------------------------------- 552
Sbjct 3067 AAATAGAAAAAAAGTATTTAATTTGGATCTGGATCTGTTAAGATATGCACAGTCTATTTTTTGTATAGTATTGG 3140
Query 553 -------------------------------------------------------------------------- 552
Sbjct 3141 AAAATAAAAATGCTATAATTTGGGTATGGGTTCTTTTGTATACATTACCTGCCCATTGAGGAAAGGGGCAAGTC 3214
Query 553 -------------------------------------------------------------------------- 552
Sbjct 3215 CATTATGCAACTTCTCTCCAAACCCTTCATATTCTGGATATGATACTTAAAGAGCCATGAGCAGCTACATTCTG 3288
Query 553 -------------------------------------------------------------------------- 552
Sbjct 3289 CCTATCAGAAGGCATTTATTAAATGACTGCTTGCTGAAGATGTGTCCAAAGAGATCCTACATTAAGGTCATTTG 3362
Query 553 -------------------------------------------------------------------------- 552
Sbjct 3363 TCAGAATGATGTTTGTGTTTGTTTAGAGTTGGCTGACCTCCAACTCCTGGGGTCAAGGAATCCTACTGCCTTAG 3436
Query 553 -------------------------------------------------------------------------- 552
Sbjct 3437 CTTCCCAAATAGCTAGGACTATAGGCATGCACCCGGCCATGTGTTTTATTTATAGCTCTTAAAGCCCAGATGAA 3510
Query 553 -------------------------------------------------------------------------- 552
Sbjct 3511 GAAATCACATTTTTGCCCATAGTGAAGAAACATTTGGCCATTGATTAGTCCTTATTTTCAGTGACTGTCCTGTT 3584
Query 553 -------------------------------------------------------------------------- 552
Sbjct 3585 TTCATTAGATTAGAGAGACCCTGTGTGGGCCACAGTTAATATAAACCATTATCACTTTTAAGTAAACCTGCACA 3658
Query 553 -------------------------------------------------------------------------- 552
Sbjct 3659 TCTTAGATTTCATAATTTCCTTATTGTTCTGACTCAAAATGAACTAAGAGCTTTTCACTTTTTGTTTGTAAGTT 3732
Query 553 -------------------------------------------------------------------------- 552
Sbjct 3733 CTCAGAGAGTCGGGTCTGCAAGTGCTTTTGCCTGCCAGGATTTTGTACTCAAATAAATGCTATTTGGCAACTAA 3806
Query 553 -------------------------------------------------------------------------- 552
Sbjct 3807 AATTCTTGCCAGCTCTCATGTAATTTTGATGTTACTGAGGTTGGTTGGTAGTTTATTTTATTAATTTTGTGGTT 3880
Query 553 --------------------------------------------------- 552
Sbjct 3881 CTTCTATCATATAGAAAAAGCCAAATACAGTTTTGTTTGAATATTTGTAAA 3931
