Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_01722
- Subject:
- XR_001780034.1
- Aligned Length:
- 1915
- Identities:
- 1209
- Gaps:
- 601
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TGCTCTACACCGTCTGCCTCCCACCCGGCTCTCTGGTCCCGGCGGTAAGATGGCGGCTACCGCGGAGTGCGATG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGGTAATGGCGGCGACCGAGCCTGAACTGCTGGAGGACGAAGACGCCAAGAGGGAAGCAGAATCCTTCAAGGAA 148
Query 1 ---------------------------------------------------------------------ATGTG 5
|||||
Sbjct 149 CAAGGGAATGCATATTATGCTAAGAAGGACTACAACGAAGCTTATAACTATTACACAAAAGCCATAGATATGTG 222
Query 6 TCCTAAAAATGCTAGCTATTATGGTAATCGAGCAGCCACCTTGATGATGCTTGGAAGGTTCCGGGAAGCTCTTG 79
||||||.|||||.||||||||.|||||||||||.|||||..||||||||||||||.||||||||||||||||||
Sbjct 223 TCCTAACAATGCCAGCTATTACGGTAATCGAGCGGCCACACTGATGATGCTTGGACGGTTCCGGGAAGCTCTTG 296
Query 80 GAGATGCACAACAGTCAGTGAGGTTGGATGACAGTTTTGTCCGGGGACATCTACGAGAGGGCAAGTGCCACCTC 153
|||||||.||.|||||.||||||||||||||||||||||||||||||||.||.|||||.|||||||||||||||
Sbjct 297 GAGATGCGCAGCAGTCTGTGAGGTTGGATGACAGTTTTGTCCGGGGACACCTCCGAGAAGGCAAGTGCCACCTC 370
Query 154 TCTCTGGGGAATGCCATGGCAGCATGTCGCAGCTTCCAGAGAGCCCTAGAACTGGATCATAAAAATGCTCAGGC 227
||.||.||||||||.|||||.||||||||.||.|||||.|||||||||||||||||||||||||||||.|||||
Sbjct 371 TCACTTGGGAATGCAATGGCGGCATGTCGTAGTTTCCAAAGAGCCCTAGAACTGGATCATAAAAATGCCCAGGC 444
Query 228 ACAACAAGAGTTCAAGAATGCTAATGCAGTCATGGAATATGAGAAAATAGCAGAAACAGATTTTGAGAAGCGAG 301
|||.||.|||||||||||.||.|||||.||||||||.||||||||||||||||||...||||||||.|||||||
Sbjct 445 ACAGCAGGAGTTCAAGAACGCCAATGCCGTCATGGAGTATGAGAAAATAGCAGAAGTGGATTTTGAAAAGCGAG 518
Query 302 ATTTTCGGAAGGTTGTTTTCTGCATGGACCGTGCCCTAGAATTTGCCCCTGCCTGCCATCGCTTCAAAATCCTC 375
||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||.|||
Sbjct 519 ATTTCCGGAAGGTTGTTTTCTGCATGGACCGTGCCCTAGAATTTGCCCCTGCCTGCCATCGATTCAAAATTCTC 592
Query 376 AAGGCAGAATGTTTAGCAATGCTGGGTCGTTATCCAGAAGCACAGTCTGTGGCTAGTGACATTCTACGAATGGA 449
||.||||||||||||||||||||.|||||.||.|||||||||||||.||||||.|||||||||.||||||||||
Sbjct 593 AAAGCAGAATGTTTAGCAATGCTTGGTCGATACCCAGAAGCACAGTTTGTGGCCAGTGACATTTTACGAATGGA 666
Query 450 TTCCACCAATGCAGATGCTCTGTATGTACGAGGTCTTTGCCTTTATTACGAAGATTGTATTGAGAAGGCAGTTC 523
||||||||||||.||||||||||||||.||.|||||||||||||||||||||||||||||||||||||||||.|
Sbjct 667 TTCCACCAATGCTGATGCTCTGTATGTCCGGGGTCTTTGCCTTTATTACGAAGATTGTATTGAGAAGGCAGTGC 740
Query 524 AGTTTTTCGTACAGGCTCTCAGGATGGCTCCTGACCACGAGAAGGCCTGCATTGCCTGCAGAAATGCCAAAGCA 597
|||||||.||||||||||||||||||||||||||||||||||||||.||..|.||.||.||||||||||||||.
Sbjct 741 AGTTTTTTGTACAGGCTCTCAGGATGGCTCCTGACCACGAGAAGGCTTGTGTCGCTTGTAGAAATGCCAAAGCC 814
Query 598 CTCAAAGCAAAGAAAGAAGATGGGAATAAAGCATTTAAGGAAGGAAATTACAAACTAGCATATGAACTGTACAC 671
||.|||||.|||||.|||||||||||||||||.||||||||||||||||||||.||||||||||||||||||||
Sbjct 815 CTTAAAGCCAAGAAGGAAGATGGGAATAAAGCCTTTAAGGAAGGAAATTACAAGCTAGCATATGAACTGTACAC 888
Query 672 AGAAGCCCTGGGGATAGACCCCAACAATATAAAAACAAATGCTAAACTCTACTGTAATCGGGGTACGGTTAATT 745
|||||||.||||||||||.||||||||.||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 AGAAGCCTTGGGGATAGATCCCAACAACATAAAAACAAATGCTAAACTCTACTGTAATCGGGGTACGGTTAATT 962
Query 746 CCAAGCTTAGGAAACTAGATGATGCAATAGAAGACTGCACAAATGCAGTGAAGCTTGATGACACTTACATAAAA 819
|||||||||||.||||.||.|||||.|||||||||||.||||||||.||||||||.||||||||||||||.|||
Sbjct 963 CCAAGCTTAGGCAACTGGAAGATGCCATAGAAGACTGTACAAATGCGGTGAAGCTCGATGACACTTACATCAAA 1036
Query 820 GCCTACTTGAGAAGAGCTCAGT---------------------------------------------------- 841
||||||.|||||||||||||||
Sbjct 1037 GCCTACCTGAGAAGAGCTCAGTGGTGGGATTGTTCCAGTCCTAGACTATCTTTATAGACCTCCAGCGGAGGAGA 1110
Query 842 ------------------------------------------------GTTACATGGACACAGAACAGTATGAA 867
||||||||||||||||.||||.||||
Sbjct 1111 TTGCACACGCTCCCTCAGTCTCCCATGCCTGTGTCTAACGCCCCTCACGTTACATGGACACAGAGCAGTTTGAA 1184
Query 868 GAAGCAGTACGAGACTATGAAAAAGTATACCAGACAGAGAAAACAAAAGAACACAAACAGCTCCTAAAAAATGC 941
|||||.||.||.||||||||||||||.||.|||||.|||||||||||||||||||||||||||||.||.|||||
Sbjct 1185 GAAGCCGTGCGGGACTATGAAAAAGTGTATCAGACGGAGAAAACAAAAGAACACAAACAGCTCCTTAAGAATGC 1258
Query 942 GCAGCTGGAACTGAAGAAGAGTAAGAGGAAAGATTACTACAAGATTCTAGGAGTGGACAAGAATGCCTCTGAGG 1015
.||||||||||||||||||||.|||||||||||||||||||||||.||.|||||||||||||||||||||||||
Sbjct 1259 ACAGCTGGAACTGAAGAAGAGCAAGAGGAAAGATTACTACAAGATCCTGGGAGTGGACAAGAATGCCTCTGAGG 1332
Query 1016 ACGAGATCAAGAAAGCTTATCGGAAACGGGCCTTGATGCACCATCCAGATCGGCATAGTGGAGCCAGTGCTGAG 1089
|||||||||||||||||||.|||||||||||||||||||||||||||||||||||.|||||.||||||||.||.
Sbjct 1333 ACGAGATCAAGAAAGCTTACCGGAAACGGGCCTTGATGCACCATCCAGATCGGCACAGTGGGGCCAGTGCCGAA 1406
Query 1090 GTTCAGAAGGAGGAGGAGAAGAAGTTCAAGGAAGTTGGAGAGGCCTTTACTATCCTCTCTGATCCCAAGAAAAA 1163
||||||||||||||||||||||||||.||||||||.||||||||||||||.|||||||||||||||||||||||
Sbjct 1407 GTTCAGAAGGAGGAGGAGAAGAAGTTTAAGGAAGTGGGAGAGGCCTTTACCATCCTCTCTGATCCCAAGAAAAA 1480
Query 1164 GACTCGCTATGACAGTGGACAGGACCTAGATGAGGAGGGCATGAATATGGGTGATTTTGATCCAAACAATATCT 1237
||||||.||||||||||||||||||.|.|||||||||||||||||||||||.|||||||||.|||||||.||||
Sbjct 1481 GACTCGTTATGACAGTGGACAGGACTTGGATGAGGAGGGCATGAATATGGGCGATTTTGATGCAAACAACATCT 1554
Query 1238 TCAAGGCATTCTTTGGCGGTCCTGGCGGCTTCAGCTTTGAAGCATCTGGTCCAGGGAATTTCTTTTTTCAATTT 1311
|||||||||||||.||.||||||||.|||||||||||||||||||||||.|||||||||||||..|||||.|||
Sbjct 1555 TCAAGGCATTCTTCGGTGGTCCTGGGGGCTTCAGCTTTGAAGCATCTGGCCCAGGGAATTTCTACTTTCAGTTT 1628
Query 1312 GGC----------------------------------------------------------------------- 1314
|||
Sbjct 1629 GGCTAATGAAGGCCAACTACTTAAAACCCAGAAAATGCAGACTTGCTTGGTTTAACCATGAGTGTGGACAGTTC 1702
Query 1315 -------------------------------------------------------------------------- 1314
Sbjct 1703 ACTTCCTCCATCATGTCCCTGTGTACTTAGAGCAGTTTCGTTTTCTCAGTCGGGTGCCCTGTGTCTGTATGAGG 1776
Query 1315 -------------------------------------------------------------------------- 1314
Sbjct 1777 GGTGAAGGAAAGGGGGCCAGTGCTGAGGACTAGGGAGGGAGGGAAGCCAGGGGTAGACAGGGAAGCAGGCAGCT 1850
Query 1315 ----------------------------------------------------------------- 1314
Sbjct 1851 TGTGAATTTTTGTTGTATTGTTTAACTTTATTAAAAAAGAAAAAGAATAAAATGTTTTGACCGTT 1915
