Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_01748
- Subject:
- NR_028403.1
- Aligned Length:
- 1996
- Identities:
- 796
- Gaps:
- 1101
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TTCCGGCGAGCCTCTCGCGGTTTCTGGGTTTCAGAGCAGTGGCCTGGACTGCAAAGAGGGAGCTGTGGGTTTTT 74
Query 1 -----------------------------------------------ATGTTCTCTTTCAACATGTTCGACCAC 27
|||||.||||||||||||||.||||||
Sbjct 75 ATTGTAAGGTTCAGGAAAAGAAGCGGCATCACCAAACGCTGTCAGTCATGTTTTCTTTCAACATGTTTGACCAC 148
Query 28 CCTATTCCCAGGGTCTTCCAAAACCGCTTCTCCACACAGTACCGCTGCTTCTCTGTGTCCATGCTAGCAGGGCC 101
||.||||||.||||||||||.||||||||||||||.|||||||||||||||||.||||||||||||||||||||
Sbjct 149 CCGATTCCCCGGGTCTTCCAGAACCGCTTCTCCACGCAGTACCGCTGCTTCTCCGTGTCCATGCTAGCAGGGCC 222
Query 102 TAATGACAGGTCAGATGTGGAGAAAGGAGGGAAGATAATTATGCCACCCTCGGCCCTGGACCAACTCAGCCGAC 175
||||||||| ||||||||||||||||.|||||.||.|||||||||||.|
Sbjct 223 TAATGACAG--------------------------TAATTATGCCACCCTCAGCCCTCGATCAACTCAGCCGGC 270
Query 176 TTAACATTACCTATCCCATGCTGTTCAAACTGACCAATAAGAATTCGGACCGCATGACGCATTGTGGCGTGCTG 249
|.||||||||||||||.||||||||.|||.||||||||||||||||.||.||.|||||.||.||.||.||.|||
Sbjct 271 TCAACATTACCTATCCTATGCTGTTTAAATTGACCAATAAGAATTCAGATCGGATGACACACTGCGGTGTACTG 344
Query 250 GAGTTTGTGGCTGATGAGGGCATCTGCTACCTCCCACACTGGATGATGCAGAACTTACTCTTGGAAGAAGGCGG 323
||||||||.||||||||.||||||||.||||||||.|||||||||||||||||.||.||.|||||.|||||.||
Sbjct 345 GAGTTTGTTGCTGATGAAGGCATCTGTTACCTCCCCCACTGGATGATGCAGAATTTGCTGTTGGAGGAAGGGGG 418
Query 324 CCTGGTCCAGGTGGAGAGCGTCAACCTTCAAGTGGCCACCTACTCCAAATTCCAACCTCAGAGCCCTGACTTCC 397
||||||.||||||||.||.||||||||.||||||||.||||||||.||.|||||.|||||||||||.|||||||
Sbjct 419 CCTGGTTCAGGTGGAAAGTGTCAACCTCCAAGTGGCGACCTACTCTAAGTTCCAGCCTCAGAGCCCAGACTTCC 492
Query 398 TGGACATCACCAACCCCAAAGCCGTATTAGAAAACGCACTTAGGAACTTTGCCTGTCTGACCACCGGGGATGTG 471
||||.||.||||||||.|||||.|||||||||||.|||.|.||.|||||.|||||||||||.||.||.||||||
Sbjct 493 TGGATATTACCAACCCTAAAGCGGTATTAGAAAATGCATTGAGAAACTTCGCCTGTCTGACGACTGGAGATGTG 566
Query 472 ATTGCCATCAACTATAATGAAAAGATCTACGAACTGCGTGTGATGGAGACCAAACCCGACAAGGCAGTGTCCAT 545
|||||.||||||||.|||||.||||||||.||.|||||.|||||||||||||||||.||||||||.||.|||||
Sbjct 567 ATTGCTATCAACTACAATGAGAAGATCTATGAGCTGCGGGTGATGGAGACCAAACCTGACAAGGCTGTATCCAT 640
Query 546 CATTGAGTGTGACATGAACGTGGACTTTGATGCTCCCCTGGGCTACAAAGAACCCGAAAGACAAGTCCAGCATG 619
.|||||.|||||||||||.|||||.||||||||||||.||||.|||||||||||.|||||||.|||.|||||||
Sbjct 641 TATTGAATGTGACATGAATGTGGATTTTGATGCTCCCTTGGGATACAAAGAACCAGAAAGACCAGTGCAGCATG 714
Query 620 AGGAGTCGACAGAAGGTGAAGCCGACCACAGTGGCTATGCTGGAGAGCTGGGCTTCCGCGCTTTCTCTGGATCT 693
|||||||.|.|||.||.|||||.|||||||||||||||||.||||||.||||||||||.||.||||||||.|||
Sbjct 715 AGGAGTCAATAGAGGGAGAAGCTGACCACAGTGGCTATGCCGGAGAGGTGGGCTTCCGTGCCTTCTCTGGTTCT 788
Query 694 GGCAATAGACTGGATGGAAAGAAGAAAGGGGTAGAGCCCAGCCCCTCCCCAATCAAGCCTGGAGATATTAAAAG 767
||.||||||||||||||.|||||.||||||||.||||||||.|||||||||||||||||||||||.||.|||||
Sbjct 789 GGGAATAGACTGGATGGGAAGAAAAAAGGGGTTGAGCCCAGTCCCTCCCCAATCAAGCCTGGAGACATCAAAAG 862
Query 768 AGGAATTCCCAATTATGAATTTAAACTTGGTAAGATAACTTTCATCAGAAATTCACGTCCCCTTGTCAAAAAGG 841
|||||||||.|||||.||||||||.|||||||||||.|||||||||||||||||||||||..|.||||||||||
Sbjct 863 AGGAATTCCTAATTACGAATTTAAGCTTGGTAAGATCACTTTCATCAGAAATTCACGTCCATTGGTCAAAAAGG 936
Query 842 TTGAAGAGGATGAAGCTGGAGGCAGATTCGTCGCTTTCTCTGGAGAAGGACAGTCATTGCGTAAAAAGGGAAGA 915
|||||||||||||||||||||||||||||.|.||||||||||||||||||||||||.|||||||.|||||||||
Sbjct 937 TTGAAGAGGATGAAGCTGGAGGCAGATTCATTGCTTTCTCTGGAGAAGGACAGTCACTGCGTAAGAAGGGAAGA 1010
Query 916 AAGCCC-------------------------------------------------------------------- 921
||||||
Sbjct 1011 AAGCCCTAAGTCTAAAACTGTTGGCTGACTGGAAAATAAAAGATCCGATTGCACCTGGCTTACAGTTACTGGCT 1084
Query 922 -------------------------------------------------------------------------- 921
Sbjct 1085 CTGACAAGTTCAGAGATACTCTGTTATTTATGGTTTGTTTAAAGTTACCTGAGAACTATCAAGCTTGTCCTGGA 1158
Query 922 -------------------------------------------------------------------------- 921
Sbjct 1159 TACAAAGCAGCAGAACTTGGAGGTTGTGTGCTTGATCTGGGGGAGAGAGCGCTGGGGTCCTCTAGGTGGTGGCC 1232
Query 922 -------------------------------------------------------------------------- 921
Sbjct 1233 TCCTCCACTCCCTAACTCCAGCTTCAGGGCCCTCACAGCCTCAGCAGAGCAGCTCCCGATTCCTGACTCACTCT 1306
Query 922 -------------------------------------------------------------------------- 921
Sbjct 1307 TCTTCCCCATGTCTGTTCATGGTGCAGTGTCTTTAGCCCATCATGGCTACTCAGGCCAGCACTTGAGTACCAGA 1380
Query 922 -------------------------------------------------------------------------- 921
Sbjct 1381 CAAAGATGGCCTCTGTTTTTATTTACAGTGACTCAGAAGGGATCTCATCCAGATGAAAGCGCTCTCATTTTAAT 1454
Query 922 -------------------------------------------------------------------------- 921
Sbjct 1455 CTGCTCGCTCTCAGTGAATTCCATGATGAAGCCAGATATGAAAGGCAGAATGAATACATGCTTGAGTAACGTGC 1528
Query 922 -------------------------------------------------------------------------- 921
Sbjct 1529 CCCCGTTACATTTATTTTTTATTATTATTTTTATTTATTTTTGTGGCTTTTCAAGACAGAGTTCCCTGGCTGTC 1602
Query 922 -------------------------------------------------------------------------- 921
Sbjct 1603 CTGGAACTCACTTTGTAGACTAGGCTGGCCTTGAACTCAAAAATCCACCTGCCTCTGCCTCCCAAGTGCTGGGA 1676
Query 922 -------------------------------------------------------------------------- 921
Sbjct 1677 TTAAAGGTGTGCGCCACCACTGCCCGCCCTCCGCTACATTTATTACCCAAGGTTCTGATGGTTTGTCTGTTTTT 1750
Query 922 -------------------------------------------------------------------------- 921
Sbjct 1751 CAAGTGCTAGGATTGAACCAGAACCTCGTGAATATTAAGCATGCCACACACTCTGCCACTGAGGCTCCCCCATA 1824
Query 922 -------------------------------------------------------------------------- 921
Sbjct 1825 CCCCATTTTCTTACTGTTTTATTGTCTTCAGATCTGCACTTTGTATGATGTAAGGTCTTTTGACATGCTGATCC 1898
Query 922 ------------------------------------------------------------------------ 921
Sbjct 1899 AGCTATTTAAAATTTGTTCCCTGAGAATAATTCTTATTGAAGAATTAAATAAACTGATTAAAACTCGCCTCT 1970
