Nucleotide Global Alignment

Description

Query:
ccsbBroad304_01789
Subject:
XM_017318187.1
Aligned Length:
1709
Identities:
1383
Gaps:
208

Alignment

Query    1  ATGGCGACCGGAGCGAACGCCACGCCGTTGGACTTCCCAAGTAAGAAGCGGAAGAGGAGCCGCTGGAACCAAGA  74
                                                                          .|||||||||||
Sbjct    1  --------------------------------------------------------------ATGGAACCAAGA  12

Query   75  CACAATGGAACAGAAGACAGTGATTCCAGGAATGCCTACAGTTATTCCCCCTGGACTTACTCGAGAACAAGAAA  148
            |||||||||.||||||||||||||||||||.||||||||||||||.|||||||||||.|||||.|||||.||||
Sbjct   13  CACAATGGAGCAGAAGACAGTGATTCCAGGCATGCCTACAGTTATACCCCCTGGACTGACTCGGGAACAGGAAA  86

Query  149  GAGCTTATATAGTGCAACTGCAGATAGAAGACCTGACTCGTAAACTGCGCACAGGAGACCTGGGCATCCCCCCT  222
            |||||||.||                                                                
Sbjct   87  GAGCTTACAT----------------------------------------------------------------  96

Query  223  AACCCTGAGGACAGGTCCCCTTCCCCTGAGCCCATCTACAATAGCGAGGGGAAGCGGCTTAACACCCGAGAGTT  296
                        |||||||||||||||||.||.||||||||.|||||||||||||||||||||||.||||||||
Sbjct   97  ------------AGGTCCCCTTCCCCTGAACCAATCTACAACAGCGAGGGGAAGCGGCTTAACACTCGAGAGTT  158

Query  297  CCGCACCCGCAAAAAGCTGGAAGAGGAGCGGCACAACCTCATCACAGAGATGGTTGCACTCAATCCGGATTTCA  370
            |||.||||||||||||||.||||||||||||||||.|||.||.||||||||||||||.|||||.||.||.||.|
Sbjct  159  CCGTACCCGCAAAAAGCTTGAAGAGGAGCGGCACACCCTTATTACAGAGATGGTTGCTCTCAACCCAGACTTTA  232

Query  371  AGCCACCTGCAGATTACAAACCTCCAGCAACACGTGTGAGTGATAAAGTCATGATTCCACAAGATGAGTACCCA  444
            |.|||||||||||||||||.||||||||||||||||||||.||||||||.|||||.||.|||||.||.||.|||
Sbjct  233  AACCACCTGCAGATTACAAGCCTCCAGCAACACGTGTGAGCGATAAAGTAATGATCCCCCAAGACGAATATCCA  306

Query  445  GAAATCAACTTTGTGGGGCTGCTCATCGGGCCCAGAGGGAACACCCTGAAGAACATAGAGAAGGAGTGCAATGC  518
            ||||||||.|||||||||||.||.||.||.||||||||||||||||||||||||||.||||||||.|||||.||
Sbjct  307  GAAATCAATTTTGTGGGGCTCCTAATTGGACCCAGAGGGAACACCCTGAAGAACATTGAGAAGGAATGCAACGC  380

Query  519  CAAGATTATGATCCGGGGGAAAGGGTCTGTGAAAGAAGGGAAGGTTGGGCGCAAAGATGGCCAGATGTTGCCAG  592
            ||||||.|||||.|||||||||||.||.||||||||||||||.||||||||.||||||||.|||||||||||||
Sbjct  381  CAAGATCATGATTCGGGGGAAAGGATCAGTGAAAGAAGGGAAAGTTGGGCGTAAAGATGGTCAGATGTTGCCAG  454

Query  593  GAGAAGATGAGCCACTTCATGCCCTGGTTACTGCCAATACAATGGAGAACGTCAAAAAGGCAGTGGAACAGATA  666
            |.|||||||||||.||||||||.||.||.|||||||||||.||||||||.||||||||||||||.||||||||.
Sbjct  455  GCGAAGATGAGCCTCTTCATGCTCTAGTCACTGCCAATACGATGGAGAATGTCAAAAAGGCAGTAGAACAGATC  528

Query  667  AGAAACATCCTGAAGCAGGGTATCGAGACTCCAGAGGACCAGAATGATCTACGGAAGATGCAGCTTCGGGAGTT  740
            |||||||||||||||||||||||.|||||.||||||||||||||.|||||||||||.|||||||||||.|||||
Sbjct  529  AGAAACATCCTGAAGCAGGGTATTGAGACCCCAGAGGACCAGAACGATCTACGGAAAATGCAGCTTCGAGAGTT  602

Query  741  GGCTCGCTTAAATGGGACCCTTCGGGAAGACGATAACAGGATCTTAAGACCCTGGCAGAGCTCAGAGACCCGCA  814
            |||||||||.|||||.||.||.||||||||.|||||.|||||||||||.||||||||||||||||||||.||||
Sbjct  603  GGCTCGCTTGAATGGCACTCTACGGGAAGATGATAATAGGATCTTAAGGCCCTGGCAGAGCTCAGAGACGCGCA  676

Query  815  GCATTACCAACACCACAGTGTGTACCAAGTGTGGAGGGGCTGGCCACATTGCTTCAGACTGTAAATTCCAAAGG  888
            ||||||||||.||.||.||||||||||||||||||||||||||.|||||||||||.||.||.|||||.||.|||
Sbjct  677  GCATTACCAATACTACTGTGTGTACCAAGTGTGGAGGGGCTGGTCACATTGCTTCTGATTGCAAATTTCAGAGG  750

Query  889  CCTGGTGATCCTCAGTCAGCTCAGGATAAAGCACGGATGGATAAAGAATATTTGTCCCTCATGGCTGAACTGGG  962
            |||||.||.||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||.||.||
Sbjct  751  CCTGGCGACCCTCAGTCAGCTCAGGATAAAGCACGGATGGATAAAGAATATTTGTCCCTTATGGCTGAGCTAGG  824

Query  963  TGAAGCACCTGTCCCAGCATCTGTGGGCTCCACCTCTGGGCCTGCCACCACACCCCTGGCCAGCGCACCTCGTC  1036
            .|||||.||||||||.||||||||||||||.||||||||||||||||||||.||||||||.||.|||||..|.|
Sbjct  825  GGAAGCTCCTGTCCCTGCATCTGTGGGCTCTACCTCTGGGCCTGCCACCACGCCCCTGGCTAGTGCACCAAGAC  898

Query 1037  CTGCTGCTCCCGCCAACAACCCACCTCCACCGTCTCTCATGTCTACCACCCAGAGCCGCCCACCCTGGATGAAT  1110
            ||||||||||.||||.|||||||||.||||||||||||||||||||.||.||||||||||||||||||||||||
Sbjct  899  CTGCTGCTCCTGCCAGCAACCCACCACCACCGTCTCTCATGTCTACAACTCAGAGCCGCCCACCCTGGATGAAT  972

Query 1111  TCTGGCCCTTCAGAGAGTCGGCCCTACCACGGCATGCATGGAGGTGGTCCTGGTGGGCCCGGAGGTGGCCCCCA  1184
            |||||.||||||||||.||||||||||||.||||||||||||||||||||||||||.||.||||||||||||||
Sbjct  973  TCTGGTCCTTCAGAGAATCGGCCCTACCATGGCATGCATGGAGGTGGTCCTGGTGGTCCTGGAGGTGGCCCCCA  1046

Query 1185  CAGCTTCCCACACCCATTACCCAGCCTGACAGGTGGGCATGGTGGACATCCCATGCAGCACAACCCCAATGGAC  1258
            |||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||.|||||||
Sbjct 1047  CAGCTTCCCACACCCATTACCCAGCCTGACAGGTGGGCATGGTGGGCATCCCATGCAGCACAACCCAAATGGAC  1120

Query 1259  CCCCACCCCCTTGGATGCAGCCACCACCACCACCGATGAACCAGGGCCCCCACCCTCCTGGGCACCATGGCCCT  1332
            |.|||||.|||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||
Sbjct 1121  CACCACCACCTTGGATGCAGCCACCACCACCACCGATGAACCAGGGCCCCCACCCACCTGGGCACCATGGCCCT  1194

Query 1333  CCTCCAATGGATCAGTACCTGGGAAGTACGCCTGTGGGCTCTGGGGTCTATCGCCTGCATCAAGGAAAAGGTAT  1406
            |||||||||     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1195  CCTCCAATG-----GTACCTGGGAAGTACGCCTGTGGGCTCTGGGGTCTATCGCCTGCATCAAGGAAAAGGTAT  1263

Query 1407  GATGCCGCCACCACCTATGGGCATGATGCCGCCGCCGCCGCCGCCTCCCAGTGGGCAGCCCCCACCCCCTCCCT  1480
            |||||||||.||.|||||||||||||||||||||||.|||||.||||||||||||||||||||.||.|||||||
Sbjct 1264  GATGCCGCCGCCGCCTATGGGCATGATGCCGCCGCCTCCGCCACCTCCCAGTGGGCAGCCCCCGCCTCCTCCCT  1337

Query 1481  CTGGTCCTCTTCCCCCATGGCAACAACAGCAGCAGCAGCCTCCGCCACCCCCTCCGCCCAGCAGCAGTATGGCT  1554
            |||||||||||||.||||||||.||.||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1338  CTGGTCCTCTTCCTCCATGGCAGCAGCAGCAGCAGCAGCCTCCGCCACCCCCTCCGCCCAGCAGCAGTATGGCT  1411

Query 1555  TCCAGTACCCCCTTGCCATGGCAGCAAAGATCCCTCCCCGCGGCGGCGATGGCCCGAGCCATGAGAGTGAGGAC  1628
            |||||.||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||
Sbjct 1412  TCCAGCACCCCCTTGCCATGGCAGCAAAGATCCCTCCCCGCGGCAGCGATGGCCCGAGCCATGAGAGTGAGGAC  1485

Query 1629  TTTCCGCGCCCATTGG----------------------------------------------------------  1644
            ||||||||||||||||                                                          
Sbjct 1486  TTTCCGCGCCCATTGGTGACCCTTCCAGGCAGACAGCCTCAGCAGCGCCCCTGGTGGACAGGATGGTTCGGCAA  1559

Query 1645  -------  1644
                   
Sbjct 1560  AGCAGCC  1566

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