Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_01804
- Subject:
- NM_001271848.1
- Aligned Length:
- 2235
- Identities:
- 420
- Gaps:
- 1788
Alignment
Query 1 ATGCCCTGCTGTAGTCACAGGAGGTGTAGAGAGGACCCCGGGACATCTGAAAGCCAGGAAAT------------ 62
|||||||||||||||||||||||.|||||||||||||||||.|||||||||||||.||||||
Sbjct 1 ATGCCCTGCTGTAGTCACAGGAGCTGTAGAGAGGACCCCGGTACATCTGAAAGCCGGGAAATGATGTTTCAGGA 74
Query 63 ---------------------------------------GGAGGAGTGGGCTTTGCTGGATATTTCCCAGAGGA 97
|||.||||||.|.|||||||||||||||||||.||
Sbjct 75 CCCAGTGGCCTTTGAGGATGTGGCTGTGAACTTCACCCAGGAAGAGTGGACATTGCTGGATATTTCCCAGAAGA 148
Query 98 AACTCTACAAGGAAGTGATGCTGGAAACTTTCAGGAACCTGACCTCTGTAGGAAAAAGTTGGAAAGACCAGAAC 171
|.||||.||.|||||||||||||||||||||||||||||||||||||.|||||||||..||||..|||||||||
Sbjct 149 ATCTCTTCAGGGAAGTGATGCTGGAAACTTTCAGGAACCTGACCTCTATAGGAAAAAAATGGAGTGACCAGAAC 222
Query 172 ATTGAATATGAGTACCAAAACCCCAGGAGAAACTTCAGGAGTCTCATAGAAAAGAAAGTCAATGAAATTAAAGA 245
||||||||||||||||||||||||||.||||.|||||||||||||||||||.||||||||||||||||||||||
Sbjct 223 ATTGAATATGAGTACCAAAACCCCAGAAGAAGCTTCAGGAGTCTCATAGAAGAGAAAGTCAATGAAATTAAAGA 296
Query 246 TGACAGTCATTGTGGAGAAACTTTTACCCAGGTTCCAGATGACAGGCTGAACTTCCAGGAGAAGAAAGCTTCTC 319
.||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||
Sbjct 297 AGACAGTCATTGTGGAGAAACTTTTACCCAGGTTCCAGATGACAGACTGAACTTCCAGGAGAAGAAAGCTTCTC 370
Query 320 CTGAAATAAAATCATGTGACAGCTTTGTGTGTGGAGAAGTTGGCCTAGGTAACTCATCTTTTAATATGAACATC 393
|||||.|||||||||||||||||||||||||||.||||||||||.||||||||||||||||||||||||.||||
Sbjct 371 CTGAAGTAAAATCATGTGACAGCTTTGTGTGTGCAGAAGTTGGCATAGGTAACTCATCTTTTAATATGAGCATC 444
Query 394 AGAGGTGACATTGGACACAAGGCCTATGAGTATCAGGAATATGGACCGAAGCCA-------------------- 447
||||||||||.||||||||||||.|||||||||||||||||||||||.||||||
Sbjct 445 AGAGGTGACACTGGACACAAGGCATATGAGTATCAGGAATATGGACCAAAGCCATATAAGTGTCAACAACCTAA 518
Query 448 -------------------------------------------------------------------------- 447
Sbjct 519 AAATAAGAAAGCCTTCAGGTATCGCCCATCCATTAGAACACAAGAAAGGGATCACACTGGAGAGAAACCCTATG 592
Query 448 -------------------------------------------------------------------------- 447
Sbjct 593 CTTGTAAAGTCTGTGGAAAAACCTTTATTTTCCATTCAAGCATTCGAAGACACATGGTAATGCACAGTGGGGAT 666
Query 448 -------------------------------------------------------------------------- 447
Sbjct 667 GGAACTTATAAATGTAAATTTTGTGGGAAAGCCTTCCATTCTTTCAGTTTATATCTTATCCATGAAAGAACTCA 740
Query 448 -------------------------------------------------------------------------- 447
Sbjct 741 CACTGGAGAGAAACCATATGAATGTAAACAATGTGGTAAATCCTTTACTTATTCTGCTACCCTTCAAATACATG 814
Query 448 -------------------------------------------------------------------------- 447
Sbjct 815 AAAGAACTCACACTGGGGAGAAGCCCTATGAATGTAGCAAATGTGATAAAGCATTTCATAGTTCTAGTTCCTAT 888
Query 448 -------------------------------------------------------------------------- 447
Sbjct 889 CATAGACATGAAAGAAGTCACATGGGAGAGAAGCCTTATCAATGCAAAGAATGTGGAAAAGCATTTGCATATAC 962
Query 448 -------------------------------------------------------------------------- 447
Sbjct 963 CAGTTCTCTTCGTAGACATGAAAGGACCCACTCTGGGAAAAAACCGTATGAATGTAAGCAATATGGGGAAGGCT 1036
Query 448 -------------------------------------------------------------------------- 447
Sbjct 1037 TATCCTATCTTATAAGTTTTCAAACACACATAAGAATGAACTCTGGAGAAAGACCTTATAAATGTAAGATATGT 1110
Query 448 -------------------------------------------------------------------------- 447
Sbjct 1111 GGGAAAGGCTTTTATTCTGCCAAGTCATTTCAAACACATGAAAAAACTCACACTGGAGAGAAACGCTATAAATG 1184
Query 448 -------------------------------------------------------------------------- 447
Sbjct 1185 CAAGCAATGTGGTAAAGCCTTCAATCTTTCCAGTTCCTTTCGATATCATGAAAGGATTCACACTGGAGAGAAAC 1258
Query 448 -------------------------------------------------------------------------- 447
Sbjct 1259 CCTATGAGTGTAAGCAGTGTGGGAAAGCCTTCAGATCTGCCTCACAGCTTCGAGTGCACGGTGGGACTCACACT 1332
Query 448 -------------------------------------------------------------------------- 447
Sbjct 1333 GGAGAGAAACCCTATGAATGTAAGGAATGTGGGAAAGCCTTCAGATCTACCTCACACCTTCGAGTGCATGGTAG 1406
Query 448 -------------------------------------------------------------------------- 447
Sbjct 1407 GACTCATACTGGAGAGAAACCCTATGAATGTAAGGAATGTGGGAAAGCCTTCAGATATGTGAAGCACCTTCAAA 1480
Query 448 -------------------------------------------------------------------------- 447
Sbjct 1481 TTCATGAAAGGACAGAAAAACACATAAGAATGCCCTCTGGAGAAAGACCTTATAAATGTAGTATATGTGAGAAA 1554
Query 448 -------------------------------------------------------------------------- 447
Sbjct 1555 GGCTTTTATTCTGCCAAGTCATTTCAAACACATGAAAAAACTCACACTGGAGAGAAACCCTATGAATGCAACCA 1628
Query 448 -------------------------------------------------------------------------- 447
Sbjct 1629 ATGTGGTAAAGCCTTCAGATGTTGCAATTCCCTTCGATATCATGAAAGGACTCACACTGGAGAGAAACCCTATG 1702
Query 448 -------------------------------------------------------------------------- 447
Sbjct 1703 AGTGTAAGCAATGTGGGAAAGCCTTCAGATCTGCCTCACACCTTCGAATGCATGAAAGGACTCACACTGGAGAG 1776
Query 448 -------------------------------------------------------------------------- 447
Sbjct 1777 AAACCCTATGAGTGTAAGCAATGTGGGAAAGCCTTCAGTTGTGCCTCAAACCTTCGAAAGCATGGTAGGACTCA 1850
Query 448 -------------------------------------------------------------------------- 447
Sbjct 1851 CACTGGAGAGAAACCCTATGAGTGTAAGCAATGTGGGAAAGCCTTCAGATCTGCCTCAAACCTTCAGATGCATG 1924
Query 448 -------------------------------------------------------------------------- 447
Sbjct 1925 AAAGGACTCACACTGGAGAGAAACCCTATGAATGTAAGGAATGCGAAAAAGCATTCTGTAAATTCTCTTCTTTT 1998
Query 448 -------------------------------------------------------------------------- 447
Sbjct 1999 CAAATACATGAAAGGAAGCACAGAGGAGAGAAGCCCTATGAATGTAAGCATTGTGGGAATGGATTCACATCTGC 2072
Query 448 -------------------------------------------------------------------------- 447
Sbjct 2073 CAAGATTCTTCAAATACATGCAAGAACACACATTGGAGAGAAACACTATGAATGTAAGGAATGCGGAAAAGCAT 2146
Query 448 -------------------------------------------------------------------------- 447
Sbjct 2147 TCAATTATTTTTCTTCCTTGCATATACACGCAAGGACTCATATGGGAGAGAAGCCATATGAATGTAAGGATTGT 2220
Query 448 --------------- 447
Sbjct 2221 GGGAAAGCATTCAGC 2235
