Nucleotide Global Alignment

Description

Query:
ccsbBroad304_01804
Subject:
NM_001348720.1
Aligned Length:
1492
Identities:
385
Gaps:
1079

Alignment

Query    1  ATGCCCTGCTGTAGTCACAGGAGGTGTAGAGAGGACCCCG----------GGA-----CATCTGAA----AGCC  55
                                 |.||.|   .|||||||.|          |||     | |.||||    |.||
Sbjct    1  ---------------------ATGTTT---CAGGACCCAGTGGCTTTTAAGGATGTGGC-TGTGAACTTCACCC  49

Query   56  AGGAAATGGAGGAGTGGGCTTTGCTGGATATTTCCCAGAGGAAACTCTACAAGGAAGTGATGCTGGAAACTTTC  129
            |      ||||||||||||||||||||||||||||||||.|||.|||||||.||||||||||||||||||||||
Sbjct   50  A------GGAGGAGTGGGCTTTGCTGGATATTTCCCAGAAGAATCTCTACAGGGAAGTGATGCTGGAAACTTTC  117

Query  130  AGGAACCTGACCTCTGTAGGAAAAAGTTGGAAAGACCAGAACATTGAATATGAGTACCAAAACCCCAGGAGAAA  203
            .||||||||||||||.|||||||||..|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  118  TGGAACCTGACCTCTATAGGAAAAAAGTGGAAAGACCAGAACATTGAATATGAGTACCAAAACCCCAGGAGAAA  191

Query  204  CTTCAGGAGTCTCATAGAAAAGAAAGTCAATGAAATTAAAGATGACAGTCATTGTGGAGAAACTTTTACCCAGG  277
            ||||||||||.|||.||||.||||||||||||||||||||||.||||||||||||||||||||||||||||..|
Sbjct  192  CTTCAGGAGTGTCACAGAAGAGAAAGTCAATGAAATTAAAGAAGACAGTCATTGTGGAGAAACTTTTACCCCAG  265

Query  278  TTCCAGATGACAGGCTGAACTTCCAGGAGAAGAAAGCTTCTCCTGAAATAAAATCATGTGACAGCTTTGTGTGT  351
            ||||||||||||||||||||||||||.||||||||||||||||||||.||||||||||||||||||||||||||
Sbjct  266  TTCCAGATGACAGGCTGAACTTCCAGAAGAAGAAAGCTTCTCCTGAAGTAAAATCATGTGACAGCTTTGTGTGT  339

Query  352  GGAGAAGTTGGCCTAGGTAACTCATCTTTTAATATGAACATCAGAGGTGACATTGGACACAAGGCCTATGAGTA  425
               |||||||||||||||||||||||||.|||||||||||||||||||||||.||||||||||||.|.|||.|.
Sbjct  340  ---GAAGTTGGCCTAGGTAACTCATCTTCTAATATGAACATCAGAGGTGACACTGGACACAAGGCATGTGAATG  410

Query  426  TCAGGAATATGGACCGAAGCCA----------------------------------------------------  447
            |||||||||||||||.||||||                                                    
Sbjct  411  TCAGGAATATGGACCAAAGCCATGGAAGAGTCAACAACCTAAAAAAGCCTTCAGATATCACCCCTCCTTGAGAA  484

Query  448  --------------------------------------------------------------------------  447
                                                                                      
Sbjct  485  CACAAGAAAGGGATCACACTGGAAAGAAACCCTATGCTTGTAAAGAATGTGGAAAAAACATTATTTACCATTCA  558

Query  448  --------------------------------------------------------------------------  447
                                                                                      
Sbjct  559  AGCATTCAAAGACACATGGTAGTGCACAGTGGGGATGGACCTTATAAATGTAAGTTTTGTGGGAAAGCATTCCA  632

Query  448  --------------------------------------------------------------------------  447
                                                                                      
Sbjct  633  TTGTCTCAGTTTATATCTTATCCATGAAAGAACTCACACTGGAGAGAAACCGTATGAATGTAAACAATGTGGTA  706

Query  448  --------------------------------------------------------------------------  447
                                                                                      
Sbjct  707  AATCTTTTAGTTATTCTGCTACCCATCGAATACATGAAAGAACTCACATTGGAGAAAAGCCTTATGAATGTCAG  780

Query  448  --------------------------------------------------------------------------  447
                                                                                      
Sbjct  781  GAATGTGGGAAAGCATTCCATAGTCCCAGATCCTGTCACAGACATGAAAGGAGTCACATGGGAGAGAAGGCTTA  854

Query  448  --------------------------------------------------------------------------  447
                                                                                      
Sbjct  855  TCAATGTAAGGAATGTGGAAAAGCATTCATGTGTCCCCGTTATGTTCGTAGACATGAAAGGACCCACTCTAGGA  928

Query  448  --------------------------------------------------------------------------  447
                                                                                      
Sbjct  929  AAAAACTTTATGAATGTAAGCAGTGTGGGAAAGCATTATCCTCTCTTACAAGTTTTCAAACACACATAAGAATG  1002

Query  448  --------------------------------------------------------------------------  447
                                                                                      
Sbjct 1003  CACTCTGGAGAAAGACCTTATGAATGTAAGACATGTGGGAAAGGCTTTTATTCTGCCAAGTCATTTCAAAGACA  1076

Query  448  --------------------------------------------------------------------------  447
                                                                                      
Sbjct 1077  TGAAAAAACTCACAGTGGAGAGAAACCGTATAAATGCAAGCAATGTGGTAAAGCCTTCACTCGTTCCGGTTCCT  1150

Query  448  --------------------------------------------------------------------------  447
                                                                                      
Sbjct 1151  TTCGATATCATGAAAGGACTCACACTGGAGAGAAACCCTATGAGTGTAAGCAATGTGGGAAAGCCTTCAGATCT  1224

Query  448  --------------------------------------------------------------------------  447
                                                                                      
Sbjct 1225  GCCCCAAATCTTCAATTGCATGGTAGGACTCACACTGGAGAGAAACCGTATCAATGTAAGGAATGTGGGAAAGC  1298

Query  448  --------------------------------------------------------------------------  447
                                                                                      
Sbjct 1299  TTTCAGATCTGCCTCACAACTTCGAATCCATCGTAGGATTCACACTGGAGAGAAACCCTATGAATGTAAGAAAT  1372

Query  448  --------------------------------------------------------------------------  447
                                                                                      
Sbjct 1373  GTGGGAAAGCCTTCAGATATGTCCAGAACTTTCGATTTCATGAAAGGACACAAACACATAAGAATGCACTCTGG  1446

Query  448  ------------  447
                        
Sbjct 1447  AGAAAGACCTTA  1458