Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_01804
- Subject:
- NM_001348720.1
- Aligned Length:
- 1492
- Identities:
- 385
- Gaps:
- 1079
Alignment
Query 1 ATGCCCTGCTGTAGTCACAGGAGGTGTAGAGAGGACCCCG----------GGA-----CATCTGAA----AGCC 55
|.||.| .|||||||.| ||| | |.|||| |.||
Sbjct 1 ---------------------ATGTTT---CAGGACCCAGTGGCTTTTAAGGATGTGGC-TGTGAACTTCACCC 49
Query 56 AGGAAATGGAGGAGTGGGCTTTGCTGGATATTTCCCAGAGGAAACTCTACAAGGAAGTGATGCTGGAAACTTTC 129
| ||||||||||||||||||||||||||||||||.|||.|||||||.||||||||||||||||||||||
Sbjct 50 A------GGAGGAGTGGGCTTTGCTGGATATTTCCCAGAAGAATCTCTACAGGGAAGTGATGCTGGAAACTTTC 117
Query 130 AGGAACCTGACCTCTGTAGGAAAAAGTTGGAAAGACCAGAACATTGAATATGAGTACCAAAACCCCAGGAGAAA 203
.||||||||||||||.|||||||||..|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 118 TGGAACCTGACCTCTATAGGAAAAAAGTGGAAAGACCAGAACATTGAATATGAGTACCAAAACCCCAGGAGAAA 191
Query 204 CTTCAGGAGTCTCATAGAAAAGAAAGTCAATGAAATTAAAGATGACAGTCATTGTGGAGAAACTTTTACCCAGG 277
||||||||||.|||.||||.||||||||||||||||||||||.||||||||||||||||||||||||||||..|
Sbjct 192 CTTCAGGAGTGTCACAGAAGAGAAAGTCAATGAAATTAAAGAAGACAGTCATTGTGGAGAAACTTTTACCCCAG 265
Query 278 TTCCAGATGACAGGCTGAACTTCCAGGAGAAGAAAGCTTCTCCTGAAATAAAATCATGTGACAGCTTTGTGTGT 351
||||||||||||||||||||||||||.||||||||||||||||||||.||||||||||||||||||||||||||
Sbjct 266 TTCCAGATGACAGGCTGAACTTCCAGAAGAAGAAAGCTTCTCCTGAAGTAAAATCATGTGACAGCTTTGTGTGT 339
Query 352 GGAGAAGTTGGCCTAGGTAACTCATCTTTTAATATGAACATCAGAGGTGACATTGGACACAAGGCCTATGAGTA 425
|||||||||||||||||||||||||.|||||||||||||||||||||||.||||||||||||.|.|||.|.
Sbjct 340 ---GAAGTTGGCCTAGGTAACTCATCTTCTAATATGAACATCAGAGGTGACACTGGACACAAGGCATGTGAATG 410
Query 426 TCAGGAATATGGACCGAAGCCA---------------------------------------------------- 447
|||||||||||||||.||||||
Sbjct 411 TCAGGAATATGGACCAAAGCCATGGAAGAGTCAACAACCTAAAAAAGCCTTCAGATATCACCCCTCCTTGAGAA 484
Query 448 -------------------------------------------------------------------------- 447
Sbjct 485 CACAAGAAAGGGATCACACTGGAAAGAAACCCTATGCTTGTAAAGAATGTGGAAAAAACATTATTTACCATTCA 558
Query 448 -------------------------------------------------------------------------- 447
Sbjct 559 AGCATTCAAAGACACATGGTAGTGCACAGTGGGGATGGACCTTATAAATGTAAGTTTTGTGGGAAAGCATTCCA 632
Query 448 -------------------------------------------------------------------------- 447
Sbjct 633 TTGTCTCAGTTTATATCTTATCCATGAAAGAACTCACACTGGAGAGAAACCGTATGAATGTAAACAATGTGGTA 706
Query 448 -------------------------------------------------------------------------- 447
Sbjct 707 AATCTTTTAGTTATTCTGCTACCCATCGAATACATGAAAGAACTCACATTGGAGAAAAGCCTTATGAATGTCAG 780
Query 448 -------------------------------------------------------------------------- 447
Sbjct 781 GAATGTGGGAAAGCATTCCATAGTCCCAGATCCTGTCACAGACATGAAAGGAGTCACATGGGAGAGAAGGCTTA 854
Query 448 -------------------------------------------------------------------------- 447
Sbjct 855 TCAATGTAAGGAATGTGGAAAAGCATTCATGTGTCCCCGTTATGTTCGTAGACATGAAAGGACCCACTCTAGGA 928
Query 448 -------------------------------------------------------------------------- 447
Sbjct 929 AAAAACTTTATGAATGTAAGCAGTGTGGGAAAGCATTATCCTCTCTTACAAGTTTTCAAACACACATAAGAATG 1002
Query 448 -------------------------------------------------------------------------- 447
Sbjct 1003 CACTCTGGAGAAAGACCTTATGAATGTAAGACATGTGGGAAAGGCTTTTATTCTGCCAAGTCATTTCAAAGACA 1076
Query 448 -------------------------------------------------------------------------- 447
Sbjct 1077 TGAAAAAACTCACAGTGGAGAGAAACCGTATAAATGCAAGCAATGTGGTAAAGCCTTCACTCGTTCCGGTTCCT 1150
Query 448 -------------------------------------------------------------------------- 447
Sbjct 1151 TTCGATATCATGAAAGGACTCACACTGGAGAGAAACCCTATGAGTGTAAGCAATGTGGGAAAGCCTTCAGATCT 1224
Query 448 -------------------------------------------------------------------------- 447
Sbjct 1225 GCCCCAAATCTTCAATTGCATGGTAGGACTCACACTGGAGAGAAACCGTATCAATGTAAGGAATGTGGGAAAGC 1298
Query 448 -------------------------------------------------------------------------- 447
Sbjct 1299 TTTCAGATCTGCCTCACAACTTCGAATCCATCGTAGGATTCACACTGGAGAGAAACCCTATGAATGTAAGAAAT 1372
Query 448 -------------------------------------------------------------------------- 447
Sbjct 1373 GTGGGAAAGCCTTCAGATATGTCCAGAACTTTCGATTTCATGAAAGGACACAAACACATAAGAATGCACTCTGG 1446
Query 448 ------------ 447
Sbjct 1447 AGAAAGACCTTA 1458