Nucleotide Global Alignment

Description

Query:
ccsbBroad304_01823
Subject:
NM_013360.2
Aligned Length:
1424
Identities:
1188
Gaps:
73

Alignment

Query    1  ATGACCACATTCAAGGAGGCAGTGACCTTCAAGGATGTGGCTGTGTTCTTCACTGAGGAGGAACTGGGGCTACT  74
            |||.|.|...||.|.||||||||||||||||||||||||||||||.||||||||||||||||.||||||||.||
Sbjct    1  ATGGCAAAGCTCTACGAGGCAGTGACCTTCAAGGATGTGGCTGTGATCTTCACTGAGGAGGAGCTGGGGCTGCT  74

Query   75  GGACCCTGCCCAGAGGAAGCTGTACCAAGACGTGATGCTTGAGAACTTCACGAACCTGCTGTCAGTGGGGCATC  148
            ||||||||||||||||||||||||||.|||.|||||||||||||||||||.|||||||||.||||||||     
Sbjct   75  GGACCCTGCCCAGAGGAAGCTGTACCGAGATGTGATGCTTGAGAACTTCAGGAACCTGCTCTCAGTGGG-----  143

Query  149  AACCATTCCACCCTTTCCACTTCCTAAGGGAAGAAAAGTTTTGGATGATGGAGACAGCAACCCAAA--GAGAAG  220
                                      |||.|||                          |.|||||  ||||.|
Sbjct  144  --------------------------AGGCAAG--------------------------ATCCAAACTGAGATG  165

Query  221  GAAATTCAGGCGGCAAGACTATTGCGGAAGCAGGACCACATGAAGACTGCCCTTGCCAGCAAATCTGGGAACAA  294
            |              |||||.||.|.|||||||||.||||||||||.|...|.|||.|||||||.|||||||||
Sbjct  166  G--------------AGACTGTTCCAGAAGCAGGAACACATGAAGAATTTTCCTGCAAGCAAATTTGGGAACAA  225

Query  295  ACTGCAAGTGACTTAACCCAGTCTCAAGACTCCATCATAAATAATTCTCACTTCTTTGAACAAGGTGATGTCCC  368
            |.||||||||||||||||..|||||||||..|||.|||||.|||.|||||.||.||||||||||.|||...|||
Sbjct  226  ATTGCAAGTGACTTAACCAGGTCTCAAGATACCACCATAAGTAACTCTCAGTTATTTGAACAAGATGACAACCC  299

Query  369  CTCCCAGGTTGAGGCAGGACTATCTATAATTCATACAGGACAGAAACCTTCACAGAATGGGAAGTGTAAACAGT  442
            |||||||.||.|.|||.|||||||||.|.||||.|||.||.|.|||||||..|||..||..||.||||||||||
Sbjct  300  CTCCCAGATTAAAGCAAGACTATCTACAGTTCACACAAGAGAAAAACCTTTCCAGGGTGAAAATTGTAAACAGT  373

Query  443  CCTTCAGTGATGTTGCCATCTTTGATCCTCCTCAGCAGTTCCACTCAGGAGAGAAGTCTCATACATGCAATGAG  516
            .|||||||||||||.||.|||||||||.||||||||||||..|.||||||||||||||||||||.||..|||||
Sbjct  374  TCTTCAGTGATGTTTCCTTCTTTGATCTTCCTCAGCAGTTATATTCAGGAGAGAAGTCTCATACCTGTGATGAG  447

Query  517  TGTGGAAAAAGCTTCTGTTACATCTCAGCTCTTCGTATTCACCAGAGAGTTCACTTGAGAGAGAAACTCTCTAA  590
            |||||||||||||||||||||||||||||.||||.||||||.|||||.||.|||.||.|||.||||..||.|||
Sbjct  448  TGTGGAAAAAGCTTCTGTTACATCTCAGCCCTTCATATTCATCAGAGGGTCCACATGGGAGTGAAATGCTATAA  521

Query  591  GTGTGACATGCGTGGTAAGGAATTCAGTCAGAGCTCATGTCTGCAAACTCGTGAGAGAGTCCACACTGGAGAGA  664
            ||||||..||.|||||||||||||.||||||||||||.||||||||||||.|.|.|||||||||||||||||||
Sbjct  522  GTGTGATGTGTGTGGTAAGGAATTTAGTCAGAGCTCACGTCTGCAAACTCATCAAAGAGTCCACACTGGAGAGA  595

Query  665  AACCATTCAAATGTGAGCAATGTGGGAAAGGCTTCAGATGTAGAGCGATACTTCAAGTTCACTGCAAATTACAC  738
            |||||||||||||||||||.||||||||||||||||||||||||.|...||||.|||||||.||||||||||||
Sbjct  596  AACCATTCAAATGTGAGCAGTGTGGGAAAGGCTTCAGATGTAGATCAGCACTTAAAGTTCATTGCAAATTACAC  669

Query  739  ACAGGAGAGAAACCTTATATTTGTGAGAAATGTGGGAGGGCCTTCATTCACGATTTCCAGCTTCAGAAACATCA  812
            |...|||||||||||||||.|||||||||||||||||.|||.|||||.|||.||||||||||||||||||||||
Sbjct  670  ATGAGAGAGAAACCTTATAATTGTGAGAAATGTGGGAAGGCTTTCATGCACAATTTCCAGCTTCAGAAACATCA  743

Query  813  GATAATTCATACTGGGGAGAAGCCGTTCAAATGTGAAATATGTGGTAAGAGCTTCTGCCTTAGGTCAAGTCTTA  886
            .|.|||||||||||||||||||||.||||||||||||||||||||||||||||||||.||||||||||||||||
Sbjct  744  CAGAATTCATACTGGGGAGAAGCCATTCAAATGTGAAATATGTGGTAAGAGCTTCTGTCTTAGGTCAAGTCTTA  817

Query  887  ATAGGCATTGCATGGTCCACACAGCAGAGAAACTGTACAAATCTGAGGAGTGTGGAAAAGGCTTCACTGATAGC  960
            ||||||||||||||||||||||||||||||||||||||||||||||..|||.|||||.|||.||||.||||||.
Sbjct  818  ATAGGCATTGCATGGTCCACACAGCAGAGAAACTGTACAAATCTGAAAAGTATGGAAGAGGTTTCATTGATAGG  891

Query  961  CTAGATTTGCATAAGCATCAGATAATTCACACAGGACAGAAACCGTACAATTGTAAAGAATGTGGGAAGAGCTT  1034
            |||||||||||||||||||||||.|||||.|..|||||||||||.||.||||||||||||||||||||||||||
Sbjct  892  CTAGATTTGCATAAGCATCAGATGATTCATATGGGACAGAAACCATATAATTGTAAAGAATGTGGGAAGAGCTT  965

Query 1035  CAGATGGTCCTCATATCTTTTGATCCATCAGCGAATCCACAGTGGAGAAAAACCATACAGATGTGAGGAGTGTG  1108
            ||.|||||||||||||||||||.|||||||.|||.||||||.|||||||||.|||||||.||||||||||||||
Sbjct  966  CAAATGGTCCTCATATCTTTTGGTCCATCAACGAGTCCACACTGGAGAAAAGCCATACAAATGTGAGGAGTGTG  1039

Query 1109  GGAAGGGCTACATTAGTAAGTCAGGTCTTAACTTGCACCAGAGGGTCCATACTGGAGAGAGACCTTATAATTGT  1182
            |||||||||||||||||||||||||||||.||||.|||||.||...|||.||.|||||||||.|||||||.|||
Sbjct 1040  GGAAGGGCTACATTAGTAAGTCAGGTCTTGACTTCCACCATAGAACCCACACGGGAGAGAGATCTTATAACTGT  1113

Query 1183  AAGGAATGTGGGAAGAGCTTTAGCCGGGCTTCAAGTATTTTGAATCATAAGAAACTCCACTGCCGGAAAAAACC  1256
            .|..|.||.||||||||||||||.|..|||||.|||||||||||||||||||||||||||||||..|.|||.||
Sbjct 1114  GATAACTGCGGGAAGAGCTTTAGACATGCTTCTAGTATTTTGAATCATAAGAAACTCCACTGCCAAAGAAAGCC  1187

Query 1257  CTTCAAATGTGAGGATTGTGGAAAGAGGCTTGTACACCGGTCTTTCTGTAAAGACCAACAAGGAGACCACAATG  1330
            .||.||||||||.||.||||||||||||||||||..||||||.|.||||||||||||||||.|||||||||.||
Sbjct 1188  ATTGAAATGTGAAGACTGTGGAAAGAGGCTTGTATGCCGGTCATACTGTAAAGACCAACAAAGAGACCACAGTG  1261

Query 1331  GAGAAAACTCATCCAAATGTGAGGACTGTGGGAAGCGCTACAAGAGGCGCTTGAATCTGGATATAATTTTATCA  1404
            ||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1262  GAGAAAACCCATCCAAATGTGAGGACTGTGGGAAGCGCTACAAGAGGCGCTTGAATCTGGATATAATTTTATCA  1335

Query 1405  TTATTTTTAAATGATATG  1422
            ||||||||||||||.||.
Sbjct 1336  TTATTTTTAAATGACATA  1353

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