Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_01823
- Subject:
- XM_011527285.2
- Aligned Length:
- 2121
- Identities:
- 1220
- Gaps:
- 702
Alignment
Query 1 ATGACCACATTCAAGGAGGCAGTGACCTTCAAGGATGTGGCTGTGTTCTTCACTGAGGAGGAACTGGGGCTACT 74
||||||||.||.|||||||||||||||||||||||.|||||||||.|||||||||||||.||.|||.||||.||
Sbjct 1 ATGACCACGTTGAAGGAGGCAGTGACCTTCAAGGACGTGGCTGTGGTCTTCACTGAGGAAGAGCTGAGGCTGCT 74
Query 75 GGACCCTGCCCAGAGGAAGCTGTACCAAGACGTGATGCTTGAGAACTTCACGAACCTGCTGTCAGTGGGGCATC 148
|||||.||||||||||||.|||||||.|||.||||||||.||||||||||.|||||||||.|||||||||||||
Sbjct 75 GGACCTTGCCCAGAGGAAACTGTACCGAGAAGTGATGCTGGAGAACTTCAGGAACCTGCTCTCAGTGGGGCATC 148
Query 149 AACCATTCCAC------CCTTTCCACTTCCTAAGGGAAGAAAAGTTTTGGATGATGGAGACAGCAACCCAAAGA 216
||.||.||||| .|||||||||||||||.||||||||||||||||||||||||||||||||||||||||
Sbjct 149 AATCACTCCACAGAGATACTTTCCACTTCCTAAAGGAAGAAAAGTTTTGGATGATGGAGACAGCAACCCAAAGA 222
Query 217 GAAGGAAATTCAGGCGGCA------------------AGACTATTGCGGAAGCAGGACCACATGAAGAC-TGCC 271
|||||.||||.|||.|||| |||||.||.|.|||.|||||.|||||||||.| ||
Sbjct 223 GAAGGGAATTTAGGAGGCAAGATCCAAATGGAGATGGAGACTGTTTCAGAATCAGGAACACATGAAGGCTTG-- 294
Query 272 CTT--GCCAGCAAATCTGGGAACAAACTGCAAGTGACTTAACCCAGTCTCAAGACTCCATCATAAATAATTCTC 343
|| |.||.||||.|||||||||||.|.||||||||||||||..||.||||||||||||..||||.|..|.||
Sbjct 295 -TTCAGTCATCAAACCTGGGAACAAATTTCAAGTGACTTAACCAGGTTTCAAGACTCCATGGTAAACAGCTTTC 367
Query 344 ACTTCTTTGAACAAGGTGATGTCCCCTCCCAGGTTGAGGCAGGACTATCTATAATTCATACAGGACAGAAACCT 417
|.||||...||||||.||||.|.||||.|||||||||.||||||||||||||||||||...|.|||||||||||
Sbjct 368 AGTTCTCCAAACAAGATGATATGCCCTGCCAGGTTGATGCAGGACTATCTATAATTCACGTAAGACAGAAACCT 441
Query 418 TCACAGAATGGGAAGTGTAAACAGTCCTTCAGTGATGTTGCCATCTTTGATCCTCCTCAGCAGTTCCACTCAGG 491
||..||..|.|||.|||||||.|||||||.||||||||..||.||.||||||.||.|||.||..|.||.|||.|
Sbjct 442 TCTGAGGGTAGGACGTGTAAAAAGTCCTTTAGTGATGTCTCCGTCCTTGATCTTCATCAACAACTACAGTCAAG 515
Query 492 AGAGAAGTCTCATACATGCAATGAGTGTGGAAAAAGCTTCTGTTACATCTCAGCTCTTCGTATTCACCAGAGAG 565
||||||||||||||||||..||||.||||||||.||.||||||||.|.||||||||||||||||||.|||||||
Sbjct 516 AGAGAAGTCTCATACATGTGATGAATGTGGAAAGAGTTTCTGTTATAGCTCAGCTCTTCGTATTCATCAGAGAG 589
Query 566 TTCACTTGAGAGAGAAACTCTCTAAGTGTGACATGCGTGGTAAGGAATTCAGTCAGAGCTCATGTCTGCAAACT 639
|||||.||.|.||||||||||.|||.|||||..||.|||||||||||||||.||||||||||..||||||||.|
Sbjct 590 TTCACATGGGGGAGAAACTCTATAATTGTGATGTGTGTGGTAAGGAATTCAATCAGAGCTCACATCTGCAAATT 663
Query 640 CGTGAGAGAGTCCACACTGGAGAGAAACCATTCAAATGTGAGCAATGTGGGAAAGGCTTCAGATGTAGAGCGAT 713
|.|.|||||.||||||||||||||||||||||||||||||||||.||||||||||||||.||..|||||.|...
Sbjct 664 CATCAGAGAATCCACACTGGAGAGAAACCATTCAAATGTGAGCAGTGTGGGAAAGGCTTTAGTCGTAGATCAGG 737
Query 714 ACTTCAAGTTCACTGCAAATTACACACAGGAGAGAAACCTTATATTTGTGAGAAATGTGGGAGGGCCTTCATTC 787
||||.|.|||||..|.||||||||||||||||.|||||||.|||||||||||||||||||||.|||||||||||
Sbjct 738 ACTTTATGTTCATCGTAAATTACACACAGGAGTGAAACCTCATATTTGTGAGAAATGTGGGAAGGCCTTCATTC 811
Query 788 ACGATTTCCAGCTTCAGAAACATCAGATAATTCATACTGGGGAGAAGCCGTTCAAATGTGAAATATGTGGTAAG 861
|.||||.||||||||||.|||||||.|.|||.|||||||||||||||||.|||||||||||.||||||.|||||
Sbjct 812 ATGATTCCCAGCTTCAGGAACATCAAAGAATCCATACTGGGGAGAAGCCATTCAAATGTGATATATGTTGTAAG 885
Query 862 AGCTTCTGCCTTAGGTCAAGTCTTAATAGGCATT---------------------------------------- 895
||||||.|...|||..|||.||||||||||||||
Sbjct 886 AGCTTCCGTAGTAGAGCAAATCTTAATAGGCATTCCATGGTTCACATGCGAGAGAAACCATTCAGATGTGATAC 959
Query 896 --------------------------------------------GCATGGTCCACACAGCAGAGAAACTGTACA 925
|||||||||||||||.||||||||.|||||
Sbjct 960 ATGTGGTAAGAGCTTTGGTCTGAAATCAGCACTTAATAGTCATCGCATGGTCCACACAGGAGAGAAACGGTACA 1033
Query 926 AATCTGAGGAGTGTGGAAAAGGCTTCACTGATAGCCTAGATTTGCATAAGCATCAGATAATTCACACAGGACAG 999
|||.||||||.|||||||||.||||||.|.||||.|.||||.|..||||||||||||||...||||||||..||
Sbjct 1034 AATGTGAGGAATGTGGAAAACGCTTCATTTATAGGCAAGATCTTTATAAGCATCAGATAGACCACACAGGGGAG 1107
Query 1000 AAACCGTACAATTGTAAAGAATGTGGGAAGAGCTTCAGATGGTCCTCA-------------------------- 1047
||.||.||.|||||||||||||||||.|||||||||||||||.|||||
Sbjct 1108 AAGCCATATAATTGTAAAGAATGTGGAAAGAGCTTCAGATGGGCCTCAGGTCTTTCAAGACATGTGCGAGTCCA 1181
Query 1048 -------------------------------------------------------------------------- 1047
Sbjct 1182 CAGTGGAGAGACAACATTCAAATGTGAAGAATGTGGGAAGGGATTTTATACAAATTCACAACGTTATTCTCACC 1255
Query 1048 -------------------------------------------------------------------------- 1047
Sbjct 1256 AGAGAGCGCACAGTGGAGAAAAGCCATATAGATGTGAGGAGTGTGGGAAGGGCTACAAAAGGAGGTTGGATCTT 1329
Query 1048 -------------------------------------------------------------------------- 1047
Sbjct 1330 GACTTTCATCAGAGGGTCCACAGAGGAGAGAAACCCTATAATTGTAAGGAATGTGGGAAGAGCTTTGGCTGGGC 1403
Query 1048 ----TATCTTTTGATCCATCAGCGAATCCACAGTGGAGAAAAA------------------------------- 1086
|.||||||||..||||||.||||||||||||||||||||
Sbjct 1404 CTCGTGTCTTTTGAATCATCAGAGAATCCACAGTGGAGAAAAACCATTTAAATGTGAAGAATGTGGGAAAAGAT 1477
Query 1087 -------------------------------------------------------------------------- 1086
Sbjct 1478 TTACTCAGAATTCACAACTTTATACCCATCGTAGAGTCCACAGTGGAGAAAAACCATTCAAATGTGAAGAGTGT 1551
Query 1087 ---------------------------------------------------------------CCATACAGATG 1097
|||||||.|||
Sbjct 1552 GGGAAAAGATTTACTCAGAATTCACAACTTTATTCTCATCGCAGAGTCCACACTGGAGTAAAGCCATACAAATG 1625
Query 1098 TGAGGAGTGTGGGAAGGGCTACATTAGTAAGTCAGGTCTTAACTTGCACCAGAGGGTCCATACTGGAGAGAGAC 1171
|||.||||||||||||||||.||..|||||||....||||.||.||||||||||||||||.||.||||||||||
Sbjct 1626 TGAAGAGTGTGGGAAGGGCTTCAACAGTAAGTTTAATCTTGACATGCACCAGAGGGTCCACACCGGAGAGAGAC 1699
Query 1172 CTTATAATTGTAAGGAATGTGGGAAGAGCTTTAGCCGGGCTTCAAGTATTTTGAATCATAAGAAACTCC----- 1240
|||||||||||||.||||||||||||||||||||||||||.||||||||||||||||||||||.|||||
Sbjct 1700 CTTATAATTGTAAAGAATGTGGGAAGAGCTTTAGCCGGGCCTCAAGTATTTTGAATCATAAGAGACTCCATGGT 1773
Query 1241 ------------------------------------------ACTG------------------CC-------- 1246
|||| ||
Sbjct 1774 GATGAAAAGCCATTCAAATGTGAAGAGTGTGGGAAGAGATTTACTGAGAATTCACAGCTTCATTCCCATCAGAG 1847
Query 1247 ------------GGAAAA------------------------------------------------------AA 1254
|||||| ||
Sbjct 1848 GGTTCACACTGGGGAAAAGCCATACAAATGTGAGAAGTGTGGAAAGAGCTTCAGATGGGCCTCAACTCATCTAA 1921
Query 1255 CCCTTCA-----------------------------AATGTGAGGATTGTGGAAAGAGGCTTGTACACCGGTCT 1299
|||.||| ||||||||||.|||||.|||||..||||.|||.|.||.
Sbjct 1922 CCCATCAGAGACTCCACAGTAGAGAAAAACTACTTCAATGTGAGGACTGTGGGAAGAGCATTGTGCACAGTTCA 1995
Query 1300 TTCTGTAAAGACCAACAAGGAGACCACAATGGAGAAAACTCATCCAAATGTGAGGACTGTGGGAAGCGCTACAA 1373
|.|..|||||||||||||.|||||||.|.||||||.||..||||.|||||||||||||||||||||||||||||
Sbjct 1996 TGCCTTAAAGACCAACAAAGAGACCAAAGTGGAGAGAAAACATCTAAATGTGAGGACTGTGGGAAGCGCTACAA 2069
Query 1374 GAGGCGCTTGAATCTGGATATAATTTTATCATTATTTTTAAATGATATG 1422
|||||||||||||||.||||...||||.|||||||||||||||||.|..
Sbjct 2070 GAGGCGCTTGAATCTTGATACGCTTTTGTCATTATTTTTAAATGACACA 2118
