Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_01898
- Subject:
- NR_160914.1
- Aligned Length:
- 2956
- Identities:
- 339
- Gaps:
- 2578
Alignment
Query 1 -----------------------------------------------ATGCCCGAGCCCTCAAAGTCCGCTCCT 27
|||||.||.||..|.||.|||||||||
Sbjct 1 AGTTCGGATTACTTCTTTAAGTCTCTGTTCTCTTTTTTCGCGCAAAAATGCCGGATCCAGCGAAATCCGCTCCT 74
Query 28 GCCCCGAAGAAAGGCTCCAAGAAGGCAGTGACAAAGGCCCAGAAGAAGGACGGCAAGAAGCGCAAGCGCAGCCG 101
||.||.|||||.||||||||.|||||.||.||.||.|..|||||||||||||||.|||||||||||||||||||
Sbjct 75 GCTCCCAAGAAGGGCTCCAAAAAGGCTGTTACGAAAGTGCAGAAGAAGGACGGCGAGAAGCGCAAGCGCAGCCG 148
Query 102 CAAGGAGAGCTACTCCGTGTACGTGTACAAGGTGCTGAAGCAGGTCCACCCCGACACCGGTATCTCGTCCAAGG 175
||||||||||||||||||.||||||||..|||||||||||||||||||||||||||||||.||||||||||||.
Sbjct 149 CAAGGAGAGCTACTCCGTTTACGTGTAGGAGGTGCTGAAGCAGGTCCACCCCGACACCGGCATCTCGTCCAAGA 222
Query 176 CCATGGGCATCATGAACTCCTTCGTCAATGACATCTTCGAGCGCATCGCCGGCGAGGCTTCCCGCCTGGCGCAT 249
||||||||||||||||||||||||||||.||||||||||||||||||||.||.|||||.||||||||||||||.
Sbjct 223 CCATGGGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCGGGAGAGGCGTCCCGCCTGGCGCAC 296
Query 250 TACAACAAGCGCTCGACCATCACCTCCAGGGAGATCCAGACGGCCGTGCGCCTGCTGCTGCCAGGGGAGCTGGC 323
||||||||||||||.||||||||.|||.|.||||||||||||||||||||||||||||||||.||.||||||||
Sbjct 297 TACAACAAGCGCTCCACCATCACGTCCCGCGAGATCCAGACGGCCGTGCGCCTGCTGCTGCCCGGCGAGCTGGC 370
Query 324 CAAGCACGCGGTGTCGGAGGGCACCAAGGCCGTCACCAAGTACACCAGTTCCAAG------------------- 378
|||||||||.|||||.||||||||||||||.|||||||||||||||||.||.||.
Sbjct 371 CAAGCACGCCGTGTCCGAGGGCACCAAGGCGGTCACCAAGTACACCAGCTCGAAATCTCAGAAGTTGGTTGAAA 444
Query 379 -------------------------------------------------------------------------- 378
Sbjct 445 CAAAAACAGTTCATACAGCATGGTAGGCAGAATTCTAAAATGATCCCAATGACTCACTCCCTTGCATAATCCCC 518
Query 379 -------------------------------------------------------------------------- 378
Sbjct 519 TTGAGTGTGGGTGGAACCTATGACTTGCTTCTAGCCAACAGAATATGACAAGGGTGATGAAATGTCACTCTTGG 592
Query 379 -------------------------------------------------------------------------- 378
Sbjct 593 GATTGCTACATTATGTAAGACTCTATCTTAGCAGTCTGGATGGAAAGTCTCCTCCTGAACTTGAAGAGGTAAGC 666
Query 379 -------------------------------------------------------------------------- 378
Sbjct 667 TGCCACGCCAGGAGAGGGCCTACAAGAGTGCCACAAGGCAAGGGCCTCTAGGAGCTGAGAGTGGCCCCCCACTG 740
Query 379 -------------------------------------------------------------------------- 378
Sbjct 741 ATGGGCAGCAAGAAAGCAGGAACCTCAGTCCTACAACCACAAAGAACTGAATTCTGCCAGTGACCTTGTGAGCC 814
Query 379 -------------------------------------------------------------------------- 378
Sbjct 815 TGGAAGAGCTGCAAAAAGAAACACAGCAAAGTCAACACCCTAACTGCAGCCTTGGAAGACTCTCAGCAGAGCAC 888
Query 379 -------------------------------------------------------------------------- 378
Sbjct 889 TCAGCTAAGCTGTGATGGGAGTCCTGACCCATGGAAACTGGAAGATCTTAAATGTTAATAGGACCCATCCTTTG 962
Query 379 -------------------------------------------------------------------------- 378
Sbjct 963 GAAGTAGGAAAGTGGCATAGAAGGAGAAGCTGAGTTAGAGATCACTCACCCACTTGCCCATCAACTGGAACTGC 1036
Query 379 -------------------------------------------------------------------------- 378
Sbjct 1037 AAGAGATCAGAGAATAAAGATATCAGTTGGTCCAAGGAAAATAATGAGGAAGAGAGAATTGGGGAGACAGAATT 1110
Query 379 -------------------------------------------------------------------------- 378
Sbjct 1111 AATGTAGACTCTGAGGGATCAACTCAGATCTCTTGAGTTTCTATTTCTCTTTCTCAAAATCCAGTACTAACAGA 1184
Query 379 -------------------------------------------------------------------------- 378
Sbjct 1185 ACTGAACAAGCTACAGGTGGTTATCAAGGAAACTTCACTGCGGTGCGTCCAGGCTTAATGCTACCTCAGGGTTG 1258
Query 379 -------------------------------------------------------------------------- 378
Sbjct 1259 CCCTTCCCATCCTTTTCATAAAATAAGCTCTAATAAACCGTGGAAGCACAGATACAAGTTGCTTCATACTCATG 1332
Query 379 -------------------------------------------------------------------------- 378
Sbjct 1333 AGTTCTACCCAGAGTTACCACAGGAAGACAAAACTCTTGACTCACAACAGCCACAGCCTGTACCCTTCTAACTG 1406
Query 379 -------------------------------------------------------------------------- 378
Sbjct 1407 TCCCCTCTGAGTCCAACTTACCCCAAAGGAGCAGAGTTGTCAAGAACCACATGTTGTCTCCAAGCTGGTGGGAG 1480
Query 379 -------------------------------------------------------------------------- 378
Sbjct 1481 CAGTGAAATCTGTAACATGCAAGATATTGAAGAGGTTCTGCTGGTGGCTCCAGAGCCAAATTAGAAAAGAGGAA 1554
Query 379 -------------------------------------------------------------------------- 378
Sbjct 1555 GGAAATTGCCTTTTCTGACCATTTTCATCATGTTCCTTTTCTGGGAAATACATCTCAAATCCTTGAAACATGCT 1628
Query 379 -------------------------------------------------------------------------- 378
Sbjct 1629 TTTCCCATGCTCATACCTGTTAGCCCATCTCTCCCAGTTTGAATCTCTGATTTTCAGGTTATGAACTCTCAGAA 1702
Query 379 -------------------------------------------------------------------------- 378
Sbjct 1703 TCCAGGGAAAAGGCTAAAGTTGTGTTGACATTCTATTCTATTTTTACCCTCTACCGTTTCTGTTTCTTACGGTT 1776
Query 379 -------------------------------------------------------------------------- 378
Sbjct 1777 AGAATATGGCAAAACCTCACTCTTTATAATTGGTTCAATGCCTGGCTAATGCCTCCAAACAATCATTTGAATCC 1850
Query 379 -------------------------------------------------------------------------- 378
Sbjct 1851 AGAAGTATCTATATCAGCCTCTATGAGGCCATGGGAAAAGTTACTCATCTACAAGAGCTGCCCTAATACAAACC 1924
Query 379 -------------------------------------------------------------------------- 378
Sbjct 1925 AGCCTCTGCTCCTCTAGGGGACACAGACAGGATCAATCTCCCATTTTGGTTAAAAAAGAAAACAAACTCTCTTC 1998
Query 379 -------------------------------------------------------------------------- 378
Sbjct 1999 CTGAAAGACATCATGAATTTGGAGTGTTTATTTTGGCTAAATCCAAGGTAATTAATTGTTTAATGTGGATGCTA 2072
Query 379 -------------------------------------------------------------------------- 378
Sbjct 2073 TGGAGAAGAAAAATAACTCATGCACATGGATAACAATATCTTCAAGAAAAGAGTTTCAGAGTACAAGTGGGGAG 2146
Query 379 -------------------------------------------------------------------------- 378
Sbjct 2147 CTCTGTGCCACCAAACTGAGGTGGCTCCTGAGACAGAGTTGTAACCCCATAAAAAGATTTTTAGGTATTGTGGT 2220
Query 379 -------------------------------------------------------------------------- 378
Sbjct 2221 AAGAGAGAAAGAGAGCTAAATGGAAACTAGGATGAATTCAATGAGTGCAGAGAGACTTTGGCAATCTTACTAGC 2294
Query 379 -------------------------------------------------------------------------- 378
Sbjct 2295 AGAGAATGAAAAATGATGACAAATCATGCTGTAGATTGGTGTACTGGCCCCAGTTTCTCACCGCTCCCTGAATC 2368
Query 379 -------------------------------------------------------------------------- 378
Sbjct 2369 TACACTCTCTCCACAGCCTCATGAGGGTACGTCTCTGACTCTTGACTGTGGCTCATCATGAGACTTTCATTGGC 2442
Query 379 -------------------------------------------------------------------------- 378
Sbjct 2443 CAGCGAAATGTGAATGGAAATGACATGGTGCTAATTTCAAACTTAGCACTTAGGAAGCTTCACACATTATCTCT 2516
Query 379 -------------------------------------------------------------------------- 378
Sbjct 2517 CACCCTCTTGTTCTCCTGTGATTGCTGAGACAAGAACATTTTTTAGCTAGTCAGCCACCGTGCGAAACAGAGCT 2590
Query 379 -------------------------------------------------------------------------- 378
Sbjct 2591 GTCCTAGACATTGTGGCTTGAGGCAGAGCTGCCTCACCTGCCCTGCAAACTTGTAAGTGAGAACTAAATGCTTA 2664
Query 379 -------------------------------------------------------------------------- 378
Sbjct 2665 CCTTTATATGCTACTGAGATTTGAAGATTGCTGTACAAGCAAGAGCTGACTGACACAAATGAAAAGCAAGGAAG 2738
Query 379 -------------------------------------------------------------------------- 378
Sbjct 2739 AAAGGCCGGGAAGAACTCAGGGTGTTCTGAAGAGACGAGAGAAGCCTCAGCTTGTTAAAATTTATATTCAAAGC 2812
Query 379 -------------------------------------------------------------------------- 378
Sbjct 2813 CTATATCTGTAACTATTTTACTATTTTGTCTCCAAAGTTTTCTACTGTATGCATGTACCATAATTTATTTCACC 2886
Query 379 ---------------------------------------------------------------------- 378
Sbjct 2887 AACTTCTCTTCATGAACATGTAGGTTATTTCTAATTTTTTACTGTGTGACCAGTAAAAAAGACTGCTTAC 2956
