Nucleotide Global Alignment

Description

Query:
ccsbBroad304_01899
Subject:
NR_160915.1
Aligned Length:
1593
Identities:
329
Gaps:
1216

Alignment

Query    1  -----------------------------------------------ATGCCTGAACCAGTCAAATCTGCTCCA  27
                                                           |||||.||.||||..|||||.|||||.
Sbjct    1  AGTTCGGATTACTTCTTTAAGTCTCTGTTCTCTTTTTTCGCGCAAAAATGCCGGATCCAGCGAAATCCGCTCCT  74

Query   28  G-TCCCTAAAAAAGGCTCCAAGAAGGCCATTAACAAGGCTCAGAAGAAGGATGGAAAGAAGCGCAAACGCAGCC  100
            | |||| ||.||.||||||||.|||||..|||..||.|..|||||||||||.||..||||||||||.|||||||
Sbjct   75  GCTCCC-AAGAAGGGCTCCAAAAAGGCTGTTACGAAAGTGCAGAAGAAGGACGGCGAGAAGCGCAAGCGCAGCC  147

Query  101  GCAAGGAGAGCTACTCTGTGTATGTGTACAAGGTGCTGAAGCAGGTCCACCCCGACACCGGCATCTCTTCCAAG  174
            ||||||||||||||||.||.||.|||||..|||||||||||||||||||||||||||||||||||||.||||||
Sbjct  148  GCAAGGAGAGCTACTCCGTTTACGTGTAGGAGGTGCTGAAGCAGGTCCACCCCGACACCGGCATCTCGTCCAAG  221

Query  175  GCTATGGGAATCATGAACTCCTTCGTCAACGACATCTTTGAGCGTATCGCCGGAGAAGCGTCACGCCTGGCGCA  248
            .|.|||||.|||||||||||||||||||||||||||||.|||||.|||||.|||||.|||||.|||||||||||
Sbjct  222  ACCATGGGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCGGGAGAGGCGTCCCGCCTGGCGCA  295

Query  249  TTACAACAAGCGCTCGACCATCACTTCGAGGGAGATCCAGACGGCCGTGCGCCTACTGCTACCCGGGGAATTGG  322
            .||||||||||||||.||||||||.||..|.|||||||||||||||||||||||.|||||.|||||.||..|||
Sbjct  296  CTACAACAAGCGCTCCACCATCACGTCCCGCGAGATCCAGACGGCCGTGCGCCTGCTGCTGCCCGGCGAGCTGG  369

Query  323  CCAAGCACGCCGTGTCCGAGGGCACCAAGGCCGTCACCAAGTATACCAGCTCCAAG------------------  378
            |||||||||||||||||||||||||||||||.|||||||||||.||||||||.|||                  
Sbjct  370  CCAAGCACGCCGTGTCCGAGGGCACCAAGGCGGTCACCAAGTACACCAGCTCGAAGTAGATCCCTAGAATCCCA  443

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct  444  AAGAACCATCACGTCCCTGATTCGCATGCTAGACCTTGGGCTGACCGCTGGGTCACGCCTCACTATGGAGCAAG  517

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct  518  GAACAAGAAGTGAAGTCCCCTGAAGGAGAGAAGCTGTGGGGAGGAGCAGTCACCTTGGTGGTGTCAGGTGTCGG  591

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct  592  CAGTCCAAGAAAAGGGGAGGCACGTGGGGAGGAATCCGTGCGGAGATGAGGGGAGCAGTGGAGACGTGGCTTTG  665

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct  666  GGCAGAGGTGGCGAGTGGACCCTCAGGCCTGTACCCTGGACACCATGAACAGAATTAGTTAACATTGTCACCCA  739

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct  740  CCATGGCCTCCGTGTGTTCCGTGAGCCCATTTGCTTTCCCAAAGGGATTCCTAGCAATGTGTGTCAACAGGTGT  813

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct  814  TGGCCTGATTTTTTTTTAATTTTTATTTTTTGAGACTGGGCAGTGCAGCAGTGGCTTGGTCTTGACTCACTGCA  887

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct  888  ACTTCCGCCTCTTGGGTTCAAGTCCTTACCTGGCAATACTGTGTTGAAGCCATTGAAACTGTCCCTATAAACTT  961

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct  962  TATAAAATTAATCAGGGAAGAAGGGAAGGGGAGAAACAAAAATAAACAAGCTTGCAGCAATTTTGCATTACTCT  1035

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct 1036  TGAGAGCAGCCTGCTCTTGGACCTGCTTCCTCACAGTTGTTTGGTGCTGTTTGTGCTAGAATCAGGCAGGCCCT  1109

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct 1110  AGATTATAGTTCTCCTGAACTGTTCTATAGATAACAACCTGAACATTATGAAATGTTAAGTTTCCCATTAGAGA  1183

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct 1184  TATTCTTTCAGATCCTGTGTACCAGTGAAACTACTGATGTCAGCTGGTCTGAAGGACCCCACTGAGGAACTGAC  1257

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct 1258  TCAGTATGCAGTTTCCAAATCCTAATGATTTCATCCCCCTTCCCCTGCCCAATCAACAACCTTAATTTTCCAAC  1331

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct 1332  CCCTCACCCTCCACAATCCCCTTAAAAACCCTAATGCAGAAGTTCTTGAGGAGATGGATTTGAGGGTCTACTCA  1405

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct 1406  TATCTCTCCCCTTGGCTGCCCTGTGATCATTAAATTCTTTGTTGCAAACTGCTGTCTTAGTGTATTGGTCTATT  1479

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct 1480  ACTGCACAGTGGGCATATGAACCTACTGCTCTTATAACACCAGAGTTGTTTTCTACTTTGTTTTAACTATTCTG  1553

Query  379  ---------------------------------------  378
                                                   
Sbjct 1554  GAAATCTCTGTATTTGTTGAATAAAATTGTAATGCGATA  1592