Nucleotide Global Alignment

Description

• Query: ccsbBroad304_02126
• Subject: NM_005451.5
• Aligned Length: 1386
• Identities: 639
• Gaps: 735

Alignment

Query    1  ATGGATTCCTTCAAAGTAGTGCTGGAGGGGCCAGCACCTTGGGGCTTCCGGCTGCAAGGGGGCAAGGACTTCAA  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGATTCCTTCAAAGTAGTGCTGGAGGGGCCAGCACCTTGGGGCTTCCGGCTGCAAGGGGGCAAGGACTTCAA  74

Query   75  TGTGCCCCTCTCCATTTCCCGGCTCACTCCTGGGGGCAAAGCGGCGCAGGCCGGAGTGGCCGTGGGTGACTGGG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  TGTGCCCCTCTCCATTTCCCGGCTCACTCCTGGGGGCAAAGCGGCGCAGGCCGGAGTGGCCGTGGGTGACTGGG  148

Query  149  TGCTGAGCATCGATGGCGAGAATGCGGGTAGCCTCACACACATCGAAGCTCAGAACAAGATCCGGGCCTGCGGG  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TGCTGAGCATCGATGGCGAGAATGCGGGTAGCCTCACACACATCGAAGCTCAGAACAAGATCCGGGCCTGCGGG  222

Query  223  GAGCGCCTCAGCCTGGGCCTCAGCAGGGCCCAGCCGGTTCAGAGCAAACCGCAGAAGGCCTCCGCCCCCGCCGC  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GAGCGCCTCAGCCTGGGCCTCAGCAGGGCCCAGCCGGTTCAGAGCAAACCGCAGAAGGCCTCCGCCCCCGCCGC  296

Query  297  GGACCCTCCGCGGTACACCTTTGCACCCAGCGTCTCCCTCAACAAGACGGCCCGGCCCTTTGGGGCGCCCCCGC  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GGACCCTCCGCGGTACACCTTTGCACCCAGCGTCTCCCTCAACAAGACGGCCCGGCCCTTTGGGGCGCCCCCGC  370

Query  371  CCGCTGACAGCGCCCCGCAGCAGAATGGACAGCCGCTCCGACCGCTGGTCCCAGATGCCAGCAAGCAGCGGCTG  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  CCGCTGACAGCGCCCCGCAGCAGAATGGACAGCCGCTCCGACCGCTGGTCCCAGATGCCAGCAAGCAGCGGCTG  444

Query  445  ATGGAGAACACAGAGGACTGGCGGCCGCGGCCGGGGACAGGCCAGTCGCGTTCCTTCCGCATCCTTGCCCACCT  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  ATGGAGAACACAGAGGACTGGCGGCCGCGGCCGGGGACAGGCCAGTCGCGTTCCTTCCGCATCCTTGCCCACCT  518

Query  519  CACAGGCACCGAGTTCATGCAAGACCCGGATGAGGAGCACCTGAAGAAATCAAG---GGAAAAGTATGTCCTGG  589
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||       ||.||.||
Sbjct  519  CACAGGCACCGAGTTCATGCAAGACCCGGATGAGGAGCACCTGAAGAAATCAAGCCAGG-------TGCCCAGG  585

Query  590  AGCTGCAG-AGCCCACG------------CTACACCC-----GCCTCCGGGACTGGCACCACC-----------  634
            |    ||| |||||..|            ||||||||     ||  ||.||.|||||.|.|||           
Sbjct  586  A----CAGAAGCCCCAGCCCCAGCCTCATCTACACCCCAGGAGC--CCTGGCCTGGCCCTACCGCCCCCAGCCC  653

Query  635  -----------------------------------------AGCGCTCTGCCC--------ACGTGCTCAACGT  659
                                                     ||||||.|||||        |||.||.||  ||
Sbjct  654  TACCAGCCGCCCGCCCTGGGCTGTGGACCCTGCGTTTGCCGAGCGCTATGCCCCGGACAAAACGAGCACA--GT  725

Query  660  G---------------CAGTCG----------------------------------------------------  666
            |               |||.||                                                    
Sbjct  726  GCTGACCCGGCACAGCCAGCCGGCCACGCCCACGCCGCTGCAGAGCCGCACCTCCATTGTGCAGGCAGCTGCCG  799

Query  667  --------------------------------------------------------------------------  666
                                                                                      
Sbjct  800  GAGGGGTGCCAGGAGGGGGCAGCAACAACGGCAAGACTCCCGTGTGTCACCAGTGCCACAAGGTCATCCGGGGC  873

Query  667  --------------------------------------------------------------------------  666
                                                                                      
Sbjct  874  CGCTACCTGGTGGCGCTGGGCCACGCGTACCACCCGGAGGAGTTTGTGTGTAGCCAGTGTGGGAAGGTCCTGGA  947

Query  667  --------------------------------------------------------------------------  666
                                                                                      
Sbjct  948  AGAGGGTGGCTTCTTTGAGGAGAAGGGCGCCATCTTCTGCCCACCATGCTATGACGTGCGCTATGCACCCAGCT  1021

Query  667  --------------------------------------------------------------------------  666
                                                                                      
Sbjct 1022  GTGCCAAGTGCAAGAAGAAGATTACAGGCGAGATCATGCACGCCCTGAAGATGACCTGGCACGTGCACTGCTTT  1095

Query  667  --------------------------------------------------------------------------  666
                                                                                      
Sbjct 1096  ACCTGTGCTGCCTGCAAGACGCCCATCCGGAACAGGGCCTTCTACATGGAGGAGGGCGTGCCCTATTGCGAGCG  1169

Query  667  --------------------------------------------------------------------------  666
                                                                                      
Sbjct 1170  AGACTATGAGAAGATGTTTGGCACGAAATGCCATGGCTGTGACTTCAAGATCGACGCTGGGGACCGCTTCCTGG  1243

Query  667  --------------------------------------------------------------------------  666
                                                                                      
Sbjct 1244  AGGCCCTGGGCTTCAGCTGGCATGACACCTGCTTCGTCTGTGCGATATGTCAGATCAACCTGGAAGGAAAGACC  1317

Query  667  ------------------------------------------------------  666
                                                                  
Sbjct 1318  TTCTACTCCAAGAAGGACAGGCCTCTCTGCAAGAGCCATGCCTTCTCTCATGTG  1371