Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_02135
- Subject:
- XR_001747258.1
- Aligned Length:
- 3311
- Identities:
- 1047
- Gaps:
- 2264
Alignment
Query 1 ------------------------------------------------ATGTCTTCCTTAAGTGGAAAAGTCCA 26
||||||||||||||||||||||||||
Sbjct 1 AAAAAAGAAATCCTCTTTTTAGAACATCTCTTGGTGGTACCATCAGAAATGTCTTCCTTAAGTGGAAAAGTCCA 74
Query 27 AACCGTTTTGGGCCTTGTAGAGCCAAGCAAACTGGGCCGTACCCTGACCCATGAACACCTGGCCATGACCTTTG 100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 AACCGTTTTGGGCCTTGTAGAGCCAAGCAAACTGGGCCGTACCCTGACCCATGAACACCTGGCCATGACCTTTG 148
Query 101 ACTGCTGTTACTGTCCACCTCCCCCGTGCCAGGAAGCTATTTCCAAAGAACCTATCGTGATGAAAAATTTATAT 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 ACTGCTGTTACTGTCCACCTCCCCCGTGCCAGGAAGCTATTTCCAAAGAACCTATCGTGATGAAAAATTTATAT 222
Query 175 TGGATTCAGAAAAACGCCTATTCCCATAAAGAAAACCTTCAATTAAATCAGGAGACAGAAGCCATAAAGGAAGA 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TGGATTCAGAAAAACGCCTATTCCCATAAAGAAAACCTTCAATTAAATCAGGAGACAGAAGCCATAAAGGAAGA 296
Query 249 ACTGTTGTATTTTAAAGCTAATGGTGGAGGGGCTTTGGTGGAAAACACAACCACTGGGATTAGCCGAGACACAC 322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 ACTGTTGTATTTTAAAGCTAATGGTGGAGGGGCTTTGGTGGAAAACACAACCACTGGGATTAGCCGAGACACAC 370
Query 323 AGACGTTGAAGAGGCTTGCAGAAGAGACTGGCGTCCATATCATATCTGGAGCCGGGTTTTATGTGGATGCAACT 396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AGACGTTGAAGAGGCTTGCAGAAGAGACTGGCGTCCATATCATATCTGGAGCCGGGTTTTATGTGGATGCAACT 444
Query 397 CACTCCTCAGAGACCAGGGCCATGTCAGTGGAGCAGCTTACCGATGTCCTTATGAATGAAATTCTCCATGGAGC 470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CACTCCTCAGAGACCAGGGCCATGTCAGTGGAGCAGCTTACCGATGTCCTTATGAATGAAATTCTCCATGGAGC 518
Query 471 TGATGGAACCAGTATCAAGTGTGGCATTATTGGAGAAATTGGTTGCTCCTGGCCTTTGACTGAGAGTGAAAGAA 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TGATGGAACCAGTATCAAGTGTGGCATTATTGGAGAAATTGGTTGCTCCTGGCCTTTGACTGAGAGTGAAAGAA 592
Query 545 AGGTTCTCCAGGCCACAGCTCATGCCCAGGCTCAGCTTGGTTGTCCTGTTATTATCCATCCTGGACGGAGCTCC 618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 AGGTTCTCCAGGCCACAGCTCATGCCCAGGCTCAGCTTGGTTGTCCTGTTATTATCCATCCTGGACGGAGCTCC 666
Query 619 AGGGCACCATTTCAGATTATCCGAATATTGCAAGAAGCAGGCGCAGACATCTCCAAAACAGTCATGTCACACCT 692
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AGGGCACCATTTCAGATTATCCGAATATTGCAAGAAGCAGGCGCAGACATCTCCAAAACAGTCATGTCACACCT 740
Query 693 GGATAGGACTATTCTTGATAAGAAAGAGCTCTTGGAGTTTGCTCAACTTGGCTGCTACTTGGAATATGATCTCT 766
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GGATAGGACTATTCTTGATAAGAAAGAGCTCTTGGAGTTTGCTCAACTTGGCTGCTACTTGGAATATGATCTCT 814
Query 767 TTGGTACTGAACTACTTCATTACCAACTCGGCCCAGATATTGACATGCCTGATGATAACAAAAGAATTAGAAGG 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TTGGTACTGAACTACTTCATTACCAACTCGGCCCAGATATTGACATGCCTGATGATAACAAAAGAATTAGAAGG 888
Query 841 GTGCGTCTCCTGGTGGAAGAGGGCTGTGAAGATCGAATTCTGGTAGCACATGACATACATACGAAAACCCGGCT 914
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GTGCGTCTCCTGGTGGAAGAGGGCTGTGAAGATCGAATTCTGGTAGCACATGACATACATACGAAAACCCGGCT 962
Query 915 GATGAAATATGGAGGTCACGGCTATTCTCATATACTCACCAATGTTGTTCCTAAAATGTTGCTGAGAGGCATAA 988
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GATGAAATATGGAGGTCACGGCTATTCTCATATACTCACCAATGTTGTTCCTAAAATGTTGCTGAGAGGCATAA 1036
Query 989 CTGAGAATGTGCTTGATAAGATTCTAATAGAGAACCCTAAGCAATGGCTAACTTTCAAA--------------- 1047
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CTGAGAATGTGCTTGATAAGATTCTAATAGAGAACCCTAAGCAATGGCTAACTTTCAAATAGGATGGTTGCTTA 1110
Query 1048 -------------------------------------------------------------------------- 1047
Sbjct 1111 TGAATTCACACCTTGAGTATAAAACTTGCAGAGAACATTCAGCGATTTCCAGTCCACTGTGAGATATTAATCAG 1184
Query 1048 -------------------------------------------------------------------------- 1047
Sbjct 1185 TTACCTAGGACTAATGACAGATCATTTCCTTCTGATGAGAACTAGGAGGGTTTGCCTTCTCTGAGACCAGCTAT 1258
Query 1048 -------------------------------------------------------------------------- 1047
Sbjct 1259 TACAACTGTGCCTCTAGGGAGTTACTCAGCCTAATTGAGCCCTATTATTTTAACTTAACAAAATAAATACAGAA 1332
Query 1048 -------------------------------------------------------------------------- 1047
Sbjct 1333 GTACCTATTTCTAAACAATGATTTAAAGTCTATATCCCCTAAGCGGAGTTGTTGTTTTTCTCCCTAATCTATCA 1406
Query 1048 -------------------------------------------------------------------------- 1047
Sbjct 1407 GCTGCACTACTTGAGAAAATTTAAAGTGTTTCTAGTTAAATTATTTCCTTCTTGAGCGATCTAATGTTTCTTGT 1480
Query 1048 -------------------------------------------------------------------------- 1047
Sbjct 1481 AATATTGATGATCCTACTAATTATCCTGCTGTTCTTTAATTAATGCTTAATGAATAATATGGCACTGTAAAATA 1554
Query 1048 -------------------------------------------------------------------------- 1047
Sbjct 1555 GCTTCTGCAACAAGGGAAGTTAAATTTTGAGACTTTTTTCCCCAAAGGATACTGACTGTAATACAATTACCAAT 1628
Query 1048 -------------------------------------------------------------------------- 1047
Sbjct 1629 TCACAATGATAAAAATATTTTGAAAGGTTAATTTTATACTGTCCACCTATCTATATATTCTTCTACTGAAATGA 1702
Query 1048 -------------------------------------------------------------------------- 1047
Sbjct 1703 TTTTGATATCTTTGGCTTTCCGGTATCTATTTTTGCCATACATTTTGCTGTTTTGCAAAGTTTGTATAAGAACA 1776
Query 1048 -------------------------------------------------------------------------- 1047
Sbjct 1777 CATAACACTACTGAATTATAAAAATTCAATCATAAAAGTCAAAATATATTACATAATATAGTTTAATGAATCAT 1850
Query 1048 -------------------------------------------------------------------------- 1047
Sbjct 1851 TACATTTATAATAACAAAGGCCACAATTTAATTAATTGGTAAGATATAATGCAAAAAAAAAAAGAGAAATGTTT 1924
Query 1048 -------------------------------------------------------------------------- 1047
Sbjct 1925 GCCTTATGTATATTCCCTTTATTTCCTTTACCTTTTGTTTTTCCTTGGACCTAAACAGAGAAAATAATGCTTAT 1998
Query 1048 -------------------------------------------------------------------------- 1047
Sbjct 1999 GTATCTGAAGAAAAGGTCAGATCTATTGGAAATGACAGCCCGATACTTGAGCCTCCTCTTTAAAAGGGTGTAAC 2072
Query 1048 -------------------------------------------------------------------------- 1047
Sbjct 2073 CACAAAACCGAGTGAACGTCACCATTTTTATTCAGTAGGCGTAACCACAAATTCCTGCGAATGCATTAGAGTGA 2146
Query 1048 -------------------------------------------------------------------------- 1047
Sbjct 2147 TTCCACAGACTGAAAGGTTACCCTCACAGTTTCTACCACCTTTGTTGGATCAAGCCAGTGTGGTTGCTTTTTAA 2220
Query 1048 -------------------------------------------------------------------------- 1047
Sbjct 2221 TGAATGTAATTCTGTAAGATTTTAACCTATACTGTACCGTAAGACTGTCCCAATTAAATAATTGCCATACTCCA 2294
Query 1048 -------------------------------------------------------------------------- 1047
Sbjct 2295 GTGTACCTGGCATGATTTTGGTATGGCTGCTCACCTGATCCTACTCTAAAGATATAACAGGACTTGAAATTTCA 2368
Query 1048 -------------------------------------------------------------------------- 1047
Sbjct 2369 AGCTCTAGTATTCAGCTCAGTGACTTCAACAATTCTTTCAAGCCATCAAACTATTGAGGAAGGCAATGTGTTCA 2442
Query 1048 -------------------------------------------------------------------------- 1047
Sbjct 2443 CCCTGGAGGCTGTTTCCAGATTCCTAAATGTACAGTGATTTCAGCATTCTGTCTGGGAATAAGATCCATCCTTC 2516
Query 1048 -------------------------------------------------------------------------- 1047
Sbjct 2517 CTTCAGCGCAATCAACCGATTTCTACCTGAATTTACTCTAATATCTTTTCTTATTACAAGATAACTATTTAGAT 2590
Query 1048 -------------------------------------------------------------------------- 1047
Sbjct 2591 TCTGCTTTATGTTTAGTCCGTATTTCTTTAACCCTAAAAAGATTATGAATTTGACATGTCATTGATCTCTCTAA 2664
Query 1048 -------------------------------------------------------------------------- 1047
Sbjct 2665 TAAGCGAATACCAACCCACAAACCACTCATCCTTTTAAAAATATTTCATGGGCATCGGTGCCATAACTAATAAA 2738
Query 1048 -------------------------------------------------------------------------- 1047
Sbjct 2739 TTTTTAAGAGTACCAACTGGTCTTTAATTATTTTATGCTTTTAATCCTGAAACAGTATTAGTTTTCATTCGAGT 2812
Query 1048 -------------------------------------------------------------------------- 1047
Sbjct 2813 GGCTTATTTATTATAGTGGCATTAGAGTGATTGTATTCAAATAGCAATTTTTCTTCATGTTTTCTGCTAAAAGG 2886
Query 1048 -------------------------------------------------------------------------- 1047
Sbjct 2887 ATTATCAACATTAAAGAGATTTCCTCTTTCCAAATGTAAAGCTATTTGAGTTGAACTTTTACCTTTAATATGCA 2960
Query 1048 -------------------------------------------------------------------------- 1047
Sbjct 2961 CTGTCATGGGCTTTCAACAAATGGTAGGATTAAATTTAGGTTGATGGCTTCATGGGGAGTATGAGAGCTGCGGT 3034
Query 1048 -------------------------------------------------------------------------- 1047
Sbjct 3035 CATTTTAGGGATATGTTTCTGTGTCTGCAATAGGTTTCATAGTTTTAGCATTATCTTATTAGTGAGGATCTATC 3108
Query 1048 -------------------------------------------------------------------------- 1047
Sbjct 3109 ATTAGAGATCATATTTATGGTGACATTTGTAATTTAATTAATTGCTACTGATGTTCTCGTAATTTCATTTTCAT 3182
Query 1048 -------------------------------------------------------------------------- 1047
Sbjct 3183 TGTACTTCTGTGGAATCATAAACAAAAGGTTAAGTGGCACATCAGGTTAATTTACTGGTCTTTGATGTTTCCAT 3256
Query 1048 ------------------------------------------------------- 1047
Sbjct 3257 CTGTGATCTTACATTCTACACAAAGTATAAATAAAATGGCTCTCATATGGTTACA 3311
