Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_02140
- Subject:
- NR_104011.2
- Aligned Length:
- 2039
- Identities:
- 389
- Gaps:
- 1633
Alignment
Query 1 -------------------ATGGCGTCGCTCAAATGTAGCACCGTCGTCTGCGTGATCTGCTTGGAGAAGCCCA 55
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 AGTCTCCTTCCACAAAACCATGGCGTCGCTCAAATGTAGCACCGTCGTCTGCGTGATCTGCTTGGAGAAGCCCA 74
Query 56 AATACCGCTGTCCAGCCTGCCGCGTGCCCTACTGCTCGGTAGTCTGCTTCCGGAAGCACAAAGAACAGTGCAAC 129
||||||||||||||||||||||||||||||| |||||||||||
Sbjct 75 AATACCGCTGTCCAGCCTGCCGCGTGCCCTA--------------------------------AACAGTGCAAC 116
Query 130 CCTGAAACTCGTCCTGTTGAGAAAAAAATAAGATCAGCTCTTCCTACCAAAACCGTAAAGCCTGTGGAAAACAA 203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 117 CCTGAAACTCGTCCTGTTGAGAAAAAAATAAGATCAGCTCTTCCTACCAAAACCGTAAAGCCTGTGGAAAACAA 190
Query 204 AGATGATGATGACTCTATAGCTGATTTTCTCAATAGTGATGAGGAAGAAGACAGAGTTTCTTTGCAGAATTTAA 277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 191 AGATGATGATGACTCTATAGCTGATTTTCTCAATAGTGATGAGGAAGAAGACAGAGTTTCTTTGCAGAATTTAA 264
Query 278 AGAATTTAG-GGGAAT-----------------------------------------------CTGCAAC---- 299
||||||||| .|||.| |||||||
Sbjct 265 AGAATTTAGATGGACTCTCGTCCTGTCACCCAGGCTGGAGTGCAGCGGCGCAATCTCGGCTCACTGCAACCTCT 338
Query 300 ---------ATT-AAGAAGCTTATTGCTCAATCCACA-CCT------------------CAGGC---------- 334
||| |||.| ||| ||||..||.|| ||| |||||
Sbjct 339 CCCTCCCAGATTCAAGCA----ATT-CTCATGCCTCAGCCTCCCGAGCAGCTGGGACTACAGGCGCCTGCCACT 407
Query 335 -------------------------AGTTGA---------------------------TGGTC---AA------ 347
|||.|| ||||| ||
Sbjct 408 ACGCCCAACCAATTTTTGTATTTTTAGTAGAGATGGGGTTTCGCCATGTTGGCCAGGCTGGTCTTGAACTCCTG 481
Query 348 -------------------CCTCGA-----------TCAGGGA----------GAAGACA-------------- 367
|||||| .|.|||| | ||.||
Sbjct 482 ACCTCAGGTGATACACCCGCCTCGACTTCCCAAAGTACTGGGATTATAGGCGTG-AGCCACCGCTCCAGGCCCT 554
Query 368 AAGCAAA----------------GCTCATGAGAGCTTACATGCAAGAGCCTTTGTT-------TGTGGAGTT-- 416
||||.|| ||||.||| || ||| |.|.||||||.||| |||| |||
Sbjct 555 AAGCTAAACTTTCATCACCTCCTGCTCCTGA---CT--CAT-CTAAAGCCTTGGTTCTCACAGTGTG--GTTCA 620
Query 417 TG------CAGA--CTGCTG-----TT--TAG-------GAATTG----TGGAGCCATCCCAGAATGAGGAGTC 464
|| |||| |.|||| || ||| |.|||| |||| |||| ||| |
Sbjct 621 TGGAGCATCAGAATCAGCTGGGAGCTTGCTAGAAACGCAGCATTGCATTTGGA----------AATG-GGA--C 681
Query 465 T------------------------------------------------------------------------- 465
|
Sbjct 682 TAGAAGATTTAGAGATGCTGAAATAATTAGAAGCAGTTTTTAAAAAGATAAAGGGCTCTGGAAGATTCCCAGTT 755
Query 466 -------------------------------------------------------------------------- 465
Sbjct 756 ATAACAAAATAAATAATCCAAACCTGCAGCTGATTGGGACATGCAGCCCTCTGGTTTACCCAGTAGGGTTAGGG 829
Query 466 -------------------------------------------------------------------------- 465
Sbjct 830 ATGGATCTTGTCCCAGCCTCAGTCTCATTCCCGCTGTGAACTTGTAGGCTTTGCTCCTGCTGTTCTCAGGAACA 903
Query 466 -------------------------------------------------------------------------- 465
Sbjct 904 AAGCTGTCATGGCCATCACACACAACGTACCTGAGGCAGCGCTCGGATGGACGTGACACCAGCCTGGTCTTGTG 977
Query 466 -------------------------------------------------------------------------- 465
Sbjct 978 CTGTCTGGACAGTGTAGCTACTGGGGCTGCCCCTGGGGAGCTGGAGGCAAGCCCAGACCACTAATTTCCTCTGA 1051
Query 466 -------------------------------------------------------------------------- 465
Sbjct 1052 AAGCTGCCTACACCCATAGCCGTATTGGCCAGGACCAGTCCCAGGGGCCAGAGGCGGATTATTGCCTCCAGGAG 1125
Query 466 -------------------------------------------------------------------------- 465
Sbjct 1126 CCTGGTCTGCAGCGGCGAGGTGCTCAGGGAACAGGGAGCTTGAGAGAAGTGTTTTTCTTCCACACCATCCAGCT 1199
Query 466 -------------------------------------------------------------------------- 465
Sbjct 1200 CTTTAGCAGCAAGGCAGGCCATTCTGATCTTAAAAAGCAAATATCCCTTTATAGCTTTAGATTTATCTAGCCCT 1273
Query 466 -------------------------------------------------------------------------- 465
Sbjct 1274 CTTAGCAGAAAATGGAAATCAAAACTATCTTTAACAAATCATCTTAACAAGGTGAACTGAAGGCACCTGGTTGC 1347
Query 466 -------------------------------------------------------------------------- 465
Sbjct 1348 AAACAGCTGGCTGCCCTGAACCAAACTGGTTCCATATGCCACAAGTCTATACACCCCAGGCAACTGTGCTTAGG 1421
Query 466 -------------------------------------------------------------------------- 465
Sbjct 1422 CCTTACATATGCTACTTGAAAACAAGATAAGAGTCCATCAAGATATAACTGATATGCCATAAAACCCAGTCTTC 1495
Query 466 -------------------------------------------------------------------------- 465
Sbjct 1496 TAAAGTGTACATCCCAGAGTTTGGTATATTCCCAGAGTTGCTTATACCACTCTTCACCTACATAACCACCCTGC 1569
Query 466 -------------------------------------------------------------------------- 465
Sbjct 1570 AGGGTAGGTGTTACTGTGCCCACTGCATACATGAGGAATATGAGGCTCAGAGAGGCTAAACAACCTGCCCAAGG 1643
Query 466 -------------------------------------------------------------------------- 465
Sbjct 1644 CCACCTGCATTGCAGTGGCAGAGCCAGCATTCCCACTCGGGTCCATCTGGTCCCCAAAATTGATCCACTGCCCA 1717
Query 466 -------------------------------------------------------------------------- 465
Sbjct 1718 CCCCGACTTCTTGGGTCTTACTTACTCTCCACTTCTGCCATGCACGCTTGATGACTGTGGCAGCTGCATGCAGC 1791
Query 466 -------------------------------------------------------------------------- 465
Sbjct 1792 CTCTGGATGTGTTTCCGAGTTAACCAGGAACGAATGGCTAAGAGGTTTGCCCAGAAACAGGAAAGAGATAATAA 1865
Query 466 -------------------------------------------------------------------------- 465
Sbjct 1866 AGGGGCCATTAGAGCTGTCAGTGACCTCGCTGCAGCAGCACCACAGTTGCTGTCAAAGTTTCAAATACGTTTTT 1939
Query 466 ----------------------------------------- 465
Sbjct 1940 TTTTTTTCAATAAATTGCTACAAATAAGGTTCTAAAATCAA 1980
