Nucleotide Global Alignment

Description

• Query: ccsbBroad304_02147
• Subject: NM_001252076.2
• Aligned Length: 1019
• Identities: 627
• Gaps: 382

Alignment

Query    1  ATGGCCGCGCCGGAGCCGCTGCGGCCGCGCCTGTGCCGCTTGGTGCGCGGAGAGCAGGGCTACGGCTTCCACCT  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GCACGGCGAGAAGGGCCGCCGCGGGCAGTTCATCCGGCGCGTGGAACCCGGTTCCCCCGCCGAGGCCGCCGCGC  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  TGCGCGCTGGGGACCGCCTGGTCGAGGTCAACGGCGTCAACGTGGAGGGCGAGACGCACCACCAGGTGGTGCAA  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  AGGATCAAGGCTGTGGAGGGGCAGACTCGGCTGCTGGTGGTGGACCAGGAGACAGATGAGGA-GCTCCGCCGGC  295
                                                                   ||| |.| ||||||     
Sbjct    1  -------------------------------------------------------ATG-GCACGCTCCG-----  13

Query  296  GGCAGCTGACCTGTACCGAGGAGATGGCCCAGCGAGGGCTCCCACCCGCCCACGACCCCTGGGAGC-------C  362
                               |||| ||  ||| ||       |||||.|||  ||..|.|.||||||       |
Sbjct   14  -------------------GGAG-TG--CCA-CG-------CCACCTGCC--CGGGCTCCGGGAGCCCCTCCAC  55

Query  363  GAAGCCAGACTGGGCACACACCGGCAGCCACAGCTCCGAAGCTGGCAAGAAGGATGTCAGTGGGCCCCTGAGGG  436
            |.||||            ||||     |||       ||.|||||.|  .||||||||||||||||||||||||
Sbjct   56  GGAGCC------------CACC-----CCA-------GAGGCTGGTA--CAGGATGTCAGTGGGCCCCTGAGGG  103

Query  437  AGCTGCGCCCTCGGCTCTGCCACCTGCGAAAGGGACCTCAGGGCTATGGGTTCAACCTGCATAGTGACAAGTCC  510
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  104  AGCTGCGCCCTCGGCTCTGCCACCTGCGAAAGGGACCTCAGGGCTATGGGTTCAACCTGCATAGTGACAAGTCC  177

Query  511  CGGCCCGGCCAGTACATCCGCTCTGTGGACCCGGGCTCACCTGCCGCCCGCTCTGGCCTCCGCGCCCAGGACCG  584
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  178  CGGCCCGGCCAGTACATCCGCTCTGTGGACCCGGGCTCACCTGCCGCCCGCTCTGGCCTCCGCGCCCAGGACCG  251

Query  585  GCTCATTGAGGTGAACGGGCAGAATGTGGAGGGACTGCGCCATGCTGAGGTGGTGGCCAGCATCAAGGCACGGG  658
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  252  GCTCATTGAGGTGAACGGGCAGAATGTGGAGGGACTGCGCCATGCTGAGGTGGTGGCCAGCATCAAGGCACGGG  325

Query  659  AGGACGAGGCCCGGCTGCTGGTCGTGGACCCCGAGACAGATGAACACTTCAAGCGGCTTCGGGTCACACCCACC  732
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  326  AGGACGAGGCCCGGCTGCTGGTCGTGGACCCCGAGACAGATGAACACTTCAAGCGGCTTCGGGTCACACCCACC  399

Query  733  GAGGAGCACGTGGAAGGTCCTCTGCCGTCACCCGTCACCAATGGAACCAGCCCTGCCCAGCTCAATGGTGGCTC  806
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  400  GAGGAGCACGTGGAAGGTCCTCTGCCGTCACCCGTCACCAATGGAACCAGCCCTGCCCAGCTCAATGGTGGCTC  473

Query  807  TGCGTGCTCGTCCCGAAGTGACCTGCCTGGTTCCGACAAGGACACTGAGGATGGCAGTGCCTGGAAGCAAGATC  880
            |||||||||||||||||||||||||||||||||||||||||||||||                           
Sbjct  474  TGCGTGCTCGTCCCGAAGTGACCTGCCTGGTTCCGACAAGGACACTG---------------------------  520

Query  881  CCTTCCAGGAGAGCGGCCTCCACCTGAGCCCCACGGCGGCCGAGGCCAAGGAGAAGGCTCGAGCCATGCGAGTC  954
                  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  521  ------AGGAGAGCGGCCTCCACCTGAGCCCCACGGCGGCCGAGGCCAAGGAGAAGGCTCGAGCCATGCGAGTC  588

Query  955  AACAAGCGCGCGCCACAGATGGACTGGAACAGGAAGCGTGAAATCTTCAGCAACTTC  1011
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  589  AACAAGCGCGCGCCACAGATGGACTGGAACAGGAAGCGTGAAATCTTCAGCAACTTC  645