Nucleotide Global Alignment

Description

• Query: ccsbBroad304_02147
• Subject: NM_023449.3
• Aligned Length: 1016
• Identities: 589
• Gaps: 343

Alignment

Query    1  ATGGCCGCGCCGGAGCCGCTGCGGCCGCGCCTGTGCCGCTTGGTGCGCGGAGAGCAGGGCTACGGCTTCCACCT  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GCACGGCGAGAAGGGCCGCCGCGGGCAGTTCATCCGGCGCGTGGAACCCGGTTCCCCCGCCGAGGCCGCCGCGC  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  TGCGCGCTGGGGACCGCCTGGTCGAGGTCAACGGCGTCAACGTGGAGGGCGAGACGCACCACCAGGTGGTGCAA  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  AGGATCAAGGCTGTGGAGGGGCAGACTCGGCTGCTGGTGGTGGACCAGGAGAC-AG-ATGAGGAGCTCCGCCGG  294
                            |.||     ||| |||            ||||  ||| || |||       |.|||.|
Sbjct    1  ----------------ATGG-----CTC-GCT------------CCAG--GACTAGCATG-------CTGCCTG  31

Query  295  CGGCAGCTGACCTGTACCGAGGAGATGGCCCAGCGAGGGCTCCCACCCGCCCACGACCCCTGGGAGC-CGAAGC  367
            |..||||         ||.||||    ||||                         |.||||.||.| |..|  
Sbjct   32  CCTCAGC---------CCCAGGA----GCCC-------------------------CTCCTGTGAACTCTCA--  65

Query  368  CAGACTGGGCACACACCGGC--AGCCACAGCTCCGAAGCTGGCAAGAAGGATGTCAGTGGGCCCCTGAGGGAGC  439
               |||||         |||  |       |||              |||||||||.||||||||..||.||||
Sbjct   66  ---ACTGG---------GGCTTA-------CTC--------------AGGATGTCAATGGGCCCCCAAGAGAGC  106

Query  440  TGCGCCCTCGGCTCTGCCACCTGCGAAAGGGACCTCAGGGCTATGGGTTCAACCTGCATAGTGACAAGTCCCGG  513
            ||||.||.||||||||||||.||||||.||||||.||||||||.||||||||||||||||||||||||||||||
Sbjct  107  TGCGTCCCCGGCTCTGCCACTTGCGAAGGGGACCCCAGGGCTACGGGTTCAACCTGCATAGTGACAAGTCCCGG  180

Query  514  CCCGGCCAGTACATCCGCTCTGTGGACCCGGGCTCACCTGCCGCCCGCTCTGGCCTCCGCGCCCAGGACCGGCT  587
            ||.||||||||||||||||||||||||||.|||||.|||||..|.|.||||||||||||.||||||||.|||||
Sbjct  181  CCTGGCCAGTACATCCGCTCTGTGGACCCTGGCTCTCCTGCTTCTCACTCTGGCCTCCGTGCCCAGGATCGGCT  254

Query  588  CATTGAGGTGAACGGGCAGAATGTGGAGGGACTGCGCCATGCTGAGGTGGTGGCCAGCATCAAGGCACGGGAGG  661
            ||||||||||||.||||||||.||||||||.|||||.|||||.|||||.||.|||||.||||||||||.|||||
Sbjct  255  CATTGAGGTGAATGGGCAGAACGTGGAGGGGCTGCGACATGCCGAGGTTGTCGCCAGAATCAAGGCACAGGAGG  328

Query  662  ACGAGGCCCGGCTGCTGGTCGTGGACCCCGAGACAGATGAACACTTCAAGCGGCTTCGGGTCACACCCACCGAG  735
            |||||||||||||||||||.||.||.||.|||||.||||||||||||||||||.|..||||||.||||||.|||
Sbjct  329  ACGAGGCCCGGCTGCTGGTAGTCGATCCTGAGACTGATGAACACTTCAAGCGGTTGAGGGTCATACCCACTGAG  402

Query  736  GAGCACGTGGAAGGTCCTCTGCCGTCACCCGTCACCAATGGAACCAGCCCTGCCCAGCTCAATGGTGGCTCTGC  809
            ||.||.||.||||||||.|||||.|||||.|||||.||.||.|||||.|||||||||||||||||||||||||.
Sbjct  403  GAACATGTAGAAGGTCCACTGCCATCACCAGTCACGAACGGGACCAGTCCTGCCCAGCTCAATGGTGGCTCTGT  476

Query  810  GTGCTCGTCCCGAAGTGACCTGCCTGGTTCCGACAAGGACACTGAGGATGGCAGTGCCTGGAAGCAAGATCCCT  883
            ||||||.|||||||||||||||||.||.||.||.|||||||.|||||||||||||.|||||||||.|||.||||
Sbjct  477  GTGCTCATCCCGAAGTGACCTGCCAGGCTCAGAGAAGGACAATGAGGATGGCAGTACCTGGAAGCGAGACCCCT  550

Query  884  TCCAGGAGAGCGGCCTCCACCTGAGCCCCACGGCGGCCGAGGCCAAGGAGAAGGCTCGAGCCATGCGAGTCAAC  957
            |||||||.||.||||||||||||||.|||||.||.||.|||||||||||||||||||||||.|..||.||||||
Sbjct  551  TCCAGGAAAGTGGCCTCCACCTGAGTCCCACAGCAGCTGAGGCCAAGGAGAAGGCTCGAGCTACTCGGGTCAAC  624

Query  958  AAGCGCGCGCCACAGATGGACTGGAACAGGAAGCGTGAAATCTTCAGCAACTTC  1011
            |||||.||.||||||||||||||||||.|||||||.||.|||||||||||||||
Sbjct  625  AAGCGGGCACCACAGATGGACTGGAACCGGAAGCGAGAGATCTTCAGCAACTTC  678