Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_02158
- Subject:
- XM_006527156.3
- Aligned Length:
- 1739
- Identities:
- 1135
- Gaps:
- 397
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTCTCTGCCGGTGGTGCTCCCGGGCTCCTGCTGCCCGGTGGCGGGGCTGTCGGGCGGACCTCAGGCCGGGGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCCTGGCGCCGCCACCGCCGCCGCCGCTCAGGAGCCGCCGCTGCCCCCGCTGCGGCCGCGCTGGCCCCGGGGTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTCTGCAGCCTCCAGCCCGGCCCCGCTGCGCCCCCGCCGCCGTGCTGGCCCCGCCGCCGGCGCTCGCGTCCCGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGCCCCGCCGCGCCAGGCTCCGCGCTGCTGCCCGCGCGCCCGCTGCTGTCGCTCGGGCTCCTGCAGCTGATCCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGGCTGCTGCATGGTGGCGCTCAGCTTCGGGGCGCTGTCGCTGAGCAGCTCGCCGCAGGTGAAGAACTCGTGCC 370
Query 1 ---------ATGATACTCCT-GGTAAACCTCTTTGTGCTGCTCTCTGTGGTTTGTGTCCTCTTAAATCTAGCTG 64
.|| .||||| |||.||.||||||||||||||||||||||||||..|||||.|||||||.||.|
Sbjct 371 CATTCTGGGCTG--GCTCCTCGGTGAATCTCTTTGTGCTGCTCTCTGTGGTTTGCATCCTCCTAAATCTCGCAG 442
Query 65 GATTTATCCTAGGCTGCCAAGGGGCCCAGTTTGTGTCCAGCGTGCCCAGGTGTGATCTGGTGGACTTAGGTGAA 138
|.||.|||||||||||.|||||.|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 443 GCTTCATCCTAGGCTGTCAAGGAGCCCAGTTTGTGTCCAGCGTGCCCAGGTGTGATCTGGTGGACTTAGGTGAA 516
Query 139 GGCAAGATTTGCTTCTGTTGTGAAGAATTTCAACCAGCCAAGTGCACAGACAAAGAAAATGCCTTGAAACTCTT 212
||||||||.||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||
Sbjct 517 GGCAAGATCTGCTTCTGTTGTGAAGAATTTCAACCAGCCAAATGCACAGACAAAGAAAATGCCTTGAAACTCTT 590
Query 213 TCCGGTTCAGCCCTGTAGTGCTGTTCACCTTCTACTTAAGAAAGTCCTCTTTGCCCTGTGTGCCTTGAATGCCC 286
.|||||.|||||.|||||||||||.||||||||.||||||||||||||.||||||||||||||||||||.|||.
Sbjct 591 CCCGGTCCAGCCTTGTAGTGCTGTGCACCTTCTGCTTAAGAAAGTCCTGTTTGCCCTGTGTGCCTTGAACGCCT 664
Query 287 TGACCACCACCGTCTGCTTGGTGGCCGCTGCCCTCCGCTACCTCCAGATATTCGCAACCAGGAGATCCTGCATC 360
||||||||||.||.||.||||||||.||||||||.||||||||||||||.||.||.|.|||.||..|.||.||.
Sbjct 665 TGACCACCACAGTGTGTTTGGTGGCTGCTGCCCTGCGCTACCTCCAGATCTTTGCCAGCAGAAGGCCATGTATT 738
Query 361 GATGAATCCCAGATTTCTGCTGAAGAAGCGGAGGATCATGGACGCATCCCCGACCCTGATGATTTTGTGCCGCC 434
||||||||||||||.|||||.||.||.|.|||.||.||.||.||.||.||.|||||.|||||.||||||||.||
Sbjct 739 GATGAATCCCAGATGTCTGCAGAGGACGTGGAAGAACACGGTCGGATTCCAGACCCAGATGACTTTGTGCCACC 812
Query 435 TGTGCCTCCCCCTTCCTATTTTGCCACGTTTTACTCGTGCACACCCCGGATGAACCGCAGGATGGTTGGTCCTG 508
.||||||||.|||||.||.||||||||.||||||||.||||||||.||||||||||||||||||||||||.|||
Sbjct 813 AGTGCCTCCTCCTTCTTACTTTGCCACATTTTACTCCTGCACACCTCGGATGAACCGCAGGATGGTTGGTTCTG 886
Query 509 ATGTTATTCCCCTGCCACACATCTACGGAGCTCGAATCAAAGGTGTGGAAGTGTTCTGTCCTCTGGATCCCCCG 582
||||.||.||.|||||.||.|||||.|||||.||.|||||.||||||||||||||||||||||||||.|||||.
Sbjct 887 ATGTCATCCCACTGCCCCATATCTATGGAGCACGCATCAAGGGTGTGGAAGTGTTCTGTCCTCTGGACCCCCCA 960
Query 583 CCGCCATATGAAGCTGTGGTGAGCCAGATGGACCAGGAGCAGGGATCTTCATTCCAAATGTCAGAAGGATCAGA 656
||.|||||.||||||||.||||||||||..|||||||||||||..|||||||||||||||.||||||||.||||
Sbjct 961 CCTCCATACGAAGCTGTAGTGAGCCAGACTGACCAGGAGCAGGAGTCTTCATTCCAAATGCCAGAAGGACCAGA 1034
Query 657 AGCTGCTGTGATCCCATTGGATCTGGGCTGCACACAAGTGACTCAAGATGGGGACATTCCTAACATACCTGCCG 730
|.||||||.||.||||...||.|..|..|||||.||..|.|||||||.|||||...||.||||||...|||..|
Sbjct 1035 AACTGCTGCGAGCCCAGCAGAGCCAGTTTGCACGCAGATAACTCAAGGTGGGGCTCTTACTAACACGACTGGTG 1108
Query 731 AAGAAAATGCATCCACCTCAACTCCCAGTTC-AACCCTGGTGCGTCCTATCAGAAGCCGGAGAGCCCTCCCACC 803
|||||||..||||....||||||||.| ||| .||.|||||.|..|||...||||||||||||||.|||| ||
Sbjct 1109 AAGAAAACACATCTGGATCAACTCCTA-TTCTCACTCTGGTTCAGCCTCCGAGAAGCCGGAGAGCTCTCC--CC 1179
Query 804 CT--TGAGGACCAGGTCGAAGAGTGACCCTGTGCTCCATCCTTCTGAGGAGAGAGCTGCCCCAGTGCTCAGCTG 875
|| |||||||.||.||.|||||.|||||||||||.||.|.|||.||||||||||||.||||.|||||||||||
Sbjct 1180 CTTCTGAGGACAAGATCAAAGAGCGACCCTGTGCTTCACCATTCGGAGGAGAGAGCTACCCCGGTGCTCAGCTG 1253
Query 876 TGAAGCTGCAACACAGACTGAAAGGAGACTGGATCTGGCTGCAGTGACTCTGAGGAGAGGCTTGAGATCTAGAG 949
.|||||||||||.|||||.||||||||.||.|||||.|||.||||||||||||||||||||..|||..|..|.|
Sbjct 1254 CGAAGCTGCAACGCAGACAGAAAGGAGGCTAGATCTCGCTACAGTGACTCTGAGGAGAGGCGCGAGGCCACGGG 1327
Query 950 CTTCGCGATGCAGACCGCGGTCTTTGATAGATTACAAATCCTACATGGACACCAAGCTGCTGGTGGCGAGGTTC 1023
|.||..||||||||||.||.|||.||||||||||||..||.|||||.|||||.||||||||.|||||.||||||
Sbjct 1328 CATCAAGATGCAGACCCCGCTCTCTGATAGATTACAGGTCATACATAGACACGAAGCTGCTAGTGGCCAGGTTC 1401
Query 1024 CTGGAGCAGTCCTCTTGTACCATGACCCCAGACATCCATGAACTTGTAGAAAACATTAAATCTGTTTTGAAATC 1097
||||||||||||||.||.|.||||||.||.|||||.||||||||||||||.|||||.||.||||||.|||||||
Sbjct 1402 CTGGAGCAGTCCTCCTGCAGCATGACTCCGGACATTCATGAACTTGTAGAGAACATAAAGTCTGTTCTGAAATC 1475
Query 1098 TGATGAGGAGCACATGGAGGAAGCCATCACAAGTGCCAGTTTTCTAGAACAGATAATGGCCCCATTGCAGCCCA 1171
.|||||||.|||||||||.|||||||||||.|||||||||||.|||||.||||||||||||||.|..|||||||
Sbjct 1476 CGATGAGGGGCACATGGAAGAAGCCATCACGAGTGCCAGTTTCCTAGAGCAGATAATGGCCCCGTCACAGCCCA 1549
Query 1172 GCACATCCAGGGCCCACAAGCTGCCCTCGCGGAGACAGCCTGGCCTGCTGCACCTCCAGAGCTGCGGCGACCTT 1245
||||||||..||||||..||.||..||.|.||||||||||.||||||||||||||.|..|||||.||.||.||.
Sbjct 1550 GCACATCCCAGGCCCAGGAGTTGAGCTGGAGGAGACAGCCCGGCCTGCTGCACCTGCGCAGCTGTGGAGATCTA 1623
Query 1246 CACACCTTCACAC---CAGCGGGGAGGCCCCGAGCCGAGAGGAGGCCC---CGGCGAGTGGAGGCTGAGCGGCC 1313
..|||||||.|.| |||| .|||||..||||||||||||||||| |.|||||.|||||||||||||||
Sbjct 1624 AGCACCTTCTCTCTGACAGC---AAGGCCGAGAGCCGAGAGGAGGCCCCAGCAGCGAGCGGAGGCTGAGCGGCC 1694
Query 1314 ACACAGCCTCATTGGGGTCATCCGAGAGACTGTCCTG 1350
|||||||||.|||||.|||||.|||||||||||||||
Sbjct 1695 ACACAGCCTTATTGGTGTCATTCGAGAGACTGTCCTG 1731
