Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_02305
- Subject:
- XM_006518929.3
- Aligned Length:
- 1678
- Identities:
- 821
- Gaps:
- 746
Alignment
Query 1 ATGCCTTCTTGGATCGGGGCTGTGATTCTTCCCCTCTTGGGGCTGCTGCTCTCCCTCCCCGCCGGGGCGGATGT 74
|||||||||||||||.||||||||||||||||.||||..|||||||||||..|||||||.||||.||||||.||
Sbjct 1 ATGCCTTCTTGGATCCGGGCTGTGATTCTTCCTCTCTCCGGGCTGCTGCTGACCCTCCCGGCCGCGGCGGACGT 74
Query 75 GAAGGCTCGGAGCTGCGGAGAGGTCCGCCAGGCGTACGGTGCCAAGGGATTCAGCCTGGCGGACATCCCCTACC 148
||||||||||||||||.|.||||||||.|||||.||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GAAGGCTCGGAGCTGCAGCGAGGTCCGTCAGGCTTACGGTGCCAAGGGATTCAGCCTGGCGGACATCCCCTACC 148
Query 149 AGGAGATCGCAGGGGAACACTTAAGAATCTGTCCTCAGGAATATACATGCTGCACCACAGAAATGGAAGACAAG 222
||||||||||||||||.||||||.|.|||||.||||||||||||||.|||||||||||||||||||||||||||
Sbjct 149 AGGAGATCGCAGGGGAGCACTTACGCATCTGCCCTCAGGAATATACCTGCTGCACCACAGAAATGGAAGACAAG 222
Query 223 TTAAGCCAACAAAGCAAACTCGAATTTGAAAACCTTGTGGAAGAGACAAGCCATTTTGTGCGCACCACTTTTGT 296
.|.||.|||||.||.|||||.||.||||||||||||||.||||||||||||||.||||||.|.|||||.|||||
Sbjct 223 CTGAGTCAACAGAGTAAACTGGAGTTTGAAAACCTTGTAGAAGAGACAAGCCACTTTGTGAGGACCACGTTTGT 296
Query 297 GTCCAGGCATAAGAAATTTGACGAATTTTTCCGAGAGCTCCTGGAGAATGCAGAAAAGTCACTAAATGATATGT 370
|||.|||||.|||||||||||.||.||||||||||||||.|||||.||.|||||||||||.||||||||.||||
Sbjct 297 GTCGAGGCACAAGAAATTTGATGAGTTTTTCCGAGAGCTGCTGGAAAACGCAGAAAAGTCCCTAAATGACATGT 370
Query 371 TTGTACGGACCTATGGCATGCTGTACATGCAGAATTCAGAAGTCTTCCAGGACCTCTTCACAGAGCTGAAAAGG 444
||||.||||||||.||.|||||||||||||||||||||||.||.|||||||||||||||||.|||||.||..||
Sbjct 371 TTGTCCGGACCTACGGGATGCTGTACATGCAGAATTCAGAGGTATTCCAGGACCTCTTCACTGAGCTAAAGCGG 444
Query 445 TACTACACTGGGGGTAATGTGAATCTGGAGGAAATGCTCAATGACTTTTGGGCTCGGCTCCTGGAACGGATGTT 518
||||||||.||||||||.||.||.|||||.||.||||||||||||||.|||||||||||||||||..|||||||
Sbjct 445 TACTACACAGGGGGTAACGTCAACCTGGAAGAGATGCTCAATGACTTCTGGGCTCGGCTCCTGGAGAGGATGTT 518
Query 519 TCAGCTGATAAACCCTCAGTATCACTTCAGTGAAGACTACCTGGAATGTGTGAGCAAATACACTGACCAGCTCA 592
.||||||||.||||||||||||||||||||.||.|||||||||||.|||||.|||||.|||||.||||||||.|
Sbjct 519 CCAGCTGATTAACCCTCAGTATCACTTCAGCGAGGACTACCTGGAGTGTGTAAGCAAGTACACAGACCAGCTGA 592
Query 593 AGCCATTTGGAGACGTGCCCCGGAAACTGAAGATTCAGGTTACCCGCGCCTTCATTGCTGCCAGGACCTTTGTC 666
|||||||||||||||||||.||||||||||||||||||||.||||||||||||||.||.||..|.|||||||||
Sbjct 593 AGCCATTTGGAGACGTGCCACGGAAACTGAAGATTCAGGTCACCCGCGCCTTCATCGCGGCTCGCACCTTTGTC 666
Query 667 CAGGGGCTGACTGTGGGCAGAGAAGTTGCAAACCGAGTTTCCAAGGTCAGCCCAACCCCAGGGTGTATCCGTGC 740
|||||.|||||.|||||||||||.|||||.|||||||||||||||||.|||||.|||||.||.||.|||||.||
Sbjct 667 CAGGGCCTGACAGTGGGCAGAGAGGTTGCCAACCGAGTTTCCAAGGTGAGCCCCACCCCTGGCTGCATCCGGGC 740
Query 741 CCTCATGAAGATGCTGTACTGCCCATACTGTCGGGGGCTT-CCCACTGTGAGGCCCTGCAACAACTACTGTCTC 813
.||||||||||||||||||||||||||||| |.|.||||| |||||||||||.||.||||||||||||||.|||
Sbjct 741 TCTCATGAAGATGCTGTACTGCCCATACTG-CCGAGGCTTGCCCACTGTGAGACCTTGCAACAACTACTGCCTC 813
Query 814 AACGTCATGAAGGGCTGCTTGGCAAATCAGGCTGACCTCGACACAGAGTGGAATCTGTTTATAGA--------T 879
||||||||||||||||||.||||.||||||||.||..|.|||||.|||||||||||.||.||||| .
Sbjct 814 AACGTCATGAAGGGCTGCCTGGCCAATCAGGCAGATTTGGACACTGAGTGGAATCTCTTCATAGAAATGAGCCA 887
Query 880 GCAATGCTCT--TGGTGGCAGA--GCGACTGGAGGGGCCATTCAACATTGAGTCGGTCATGGACCCGATAGATG 949
|.|||||||| | |||..||| ||| ||.| ||.|||.|..||.| |.|| |.||.|||
Sbjct 888 GAAATGCTCTAAT-GTGAAAGACGGCG--TGCA---------CACCATGGGTTCTG-CTTG-----GCTACATG 943
Query 950 TCAAGATTTCTGAAGCCATTATGAACATGCAAGAAAACAGCATGCAGGTGTCTGCAAAGGTCTTTCAGGGATGT 1023
||
Sbjct 944 ---AG--------------------------------------------------------------------- 945
Query 1024 GGTCAGCCCAAACCTGCTCCAGCCCTCAGATCTGCCCGCTCAGCTCCTGAAAATTTTAATACACGTTTCAGGCC 1097
Sbjct 946 -------------------------------------------------------------------------- 945
Query 1098 CTACAATCCTGAGGAAAGACCAACAACTGCTGCAGGCACAAGCTTGGACCGGCTGGTCACAGACATAAAAGAGA 1171
Sbjct 946 -------------------------------------------------------------------------- 945
Query 1172 AATTGAAGCTCTCTAAAAAGGTCTGGTCAGCATTACCCTACACTATCTGCAAGGACGAGAGCGTGACAGCGGGC 1245
Sbjct 946 -------------------------------------------------------------------------- 945
Query 1246 ACGTCCAACGAGGAGGAATGCTGGAACGGGCACAGCAAAGCCAGATACTTGCCTGAGATCATGAATGATGGGCT 1319
Sbjct 946 -------------------------------------------------------------------------- 945
Query 1320 CACCAACCAGATCAACAATCCCGAGGTGGATGTGGACATCACTCGGCCTGACACTTTCATCAGACAGCAGATTA 1393
Sbjct 946 -------------------------------------------------------------------------- 945
Query 1394 TGGCTCTCCGTGTGATGACCAACAAACTAAAAAACGCCTACAATGGCAATGATGTCAATTTCCAGGACACAAGT 1467
Sbjct 946 -------------------------------------------------------------------------- 945
Query 1468 GATGAATCCAGTGGCTCAGGGAGTGGCAGTGGGTGCATGGATGACGTGTGTCCCACGGAGTTTGAGTTTGTCAC 1541
Sbjct 946 -------------------------------------------------------------------------- 945
Query 1542 CACAGAGGCCCCCGCAGTGGATCCCGACCGGAGAGAGGTGGACTCTTCTGCAGCCCAGCGTGGCCACTCCCTGC 1615
Sbjct 946 -------------------------------------------------------------------------- 945
Query 1616 TCTCCTGGTCTCTCACCTGCATTGTCCTGGCACTGCAGAGACTGTGCAGA 1665
Sbjct 946 -------------------------------------------------- 945
