Nucleotide Global Alignment

Description

• Query: ccsbBroad304_02309
• Subject: XM_017010152.1
• Aligned Length: 1224
• Identities: 639
• Gaps: 558

Alignment

Query    1  ATGAAGAAGAAGCAGCAGCATCCCGGCGGCGGCGCGGATCCCTGGCCCCATGGGGCCCCTATGGGGGGCGCCCC  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGAAGAAGAAGCAGCAGCATCCCGGCGGCGGCGCGGATCCCTGGCCCCATGGGGCCCCTATGGGGGGCGCCCC  74

Query   75  TCCGGGCCTGGGCAGCTGGAAGCGTCGGGTGCCCCTGCTGCCTTTCCTGCGCTTCTCCCTCCGGGACTACGGCT  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  TCCGGGCCTGGGCAGCTGGAAGCGTCGGGTGCCCCTGCTGCCTTTCCTGCGCTTCTCCCTCCGGGACTACGGCT  148

Query  149  TCTGCATGGCCACCCTGCTGGTCTTCTGCCTGGGCTCCCTCCTCTATCAGCTCAGCGGGGGACCCCCTCGCTTC  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TCTGCATGGCCACCCTGCTGGTCTTCTGCCTGGGCTCCCTCCTCTATCAGCTCAGCGGGGGACCCCCTCGCTTC  222

Query  223  CTGCTCGACCTGCGGCAGTACTTGGGAAATTCCACTTACTTGGATGACCATGGACCACCTCCTAGTAAGGTACT  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CTGCTCGACCTGCGGCAGTACTTGGGAAATTCCACTTACTTGGATGACCATGGACCACCTCCTAGTAAGGTACT  296

Query  297  ACCTTTCCCAAGCCAGGTGGTGTACAACAGGGTAGGCAAGTGTGGGAGCCGTACTGTGGTCTTGCTTCTGAGAA  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  ACCTTTCCCAAGCCAGGTGGTGTACAACAGGGTAGGCAAGTGTGGGAGCCGTACTGTGGTCTTGCTTCTGAGAA  370

Query  371  TCTTGTCGGAGAAGCACGGATTTAATTTGGTCACATCAGACATTCACAACAAAACCAGGCTTACTAAAAATGAA  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TCTTGTCGGAGAAGCACGGATTTAATTTGGTCACATCAGACATTCACAACAAAACCAGGCTTACTAAAAATGAA  444

Query  445  CAAATGGAACTGATTAAAAATATAAGTACTGCCGAACAACCCTATTTATTCACTCGACATGTTCATTTCCTCAA  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CAAATGGAACTGATTAAAAATATAAGTACTGCCGAACAACCCTATTTATTCACTCGACATGTTCATTTCCTCAA  518

Query  519  CTTCTCAAGGTTTGGAGGAGACCAGCCTGTCTACATCAACATCATTAGAGACCCCGTCAACCGGTT--CTTATC  590
            ||||||||      |||.|      |||                     |||||.|  |||.|.||  .|||  
Sbjct  519  CTTCTCAA------GAGCA------CCT---------------------GACCCGG--AACTGTTTGAATTA--  555

Query  591  CAACTATTTTTTCCGTCGCTTTGGAGACTGGAGAGGGGAACAAAATCACATGATCCG-CACCCCCAGCATGAGG  663
            ||| |||                        |||||             |.|..||| |.|.|||||||  |||
Sbjct  556  CAA-TAT------------------------AGAGG-------------AAGTGCCGTCTCACCCAGCA--AGG  589

Query  664  CAGGAGGAGCGCTACCTGGATATCAA-TGAGTGTATTCTTGAAAACTATC-CCGAGTGCTCCAACCCCAGGTTA  735
            |||...||.| |||||    .||||| ||             ||||..|| |||||.|  ||||          
Sbjct  590  CAGTCAGAAC-CTACC----AATCAACTG-------------AAACATTCACCGAGGG--CCAA----------  633

Query  736  TTTTACATCATTCCGTACTTTTGTGGACAGCATCCCAGATGCAGGGAGCCTGGTGAATGGGCCCTTGAGAGAGC  809
                                |||||       ||||.|     .||...|||.|..|   |||.|||       
Sbjct  634  --------------------TTGTG-------TCCCTG-----TGGGTTCTGTTCTA---GCCATTG-------  665

Query  810  AAAGCTGAACGTGAATGAAA-ACTTCCTGCTCGTGGGGATTCTTGAAGAGTTGGAAGATGTGCTGCTGTTACTG  882
                            |||| ||                                                   
Sbjct  666  ----------------GAAATAC---------------------------------------------------  672

Query  883  GAAAGATTTTTACCTCATTACTTCAAGGGCGTGCTCAGTATCTACAAAGACCCAGAGCACAGGAAGCTTGGAAA  956
                                                                                      
Sbjct  673  --------------------------------------------------------------------------  672

Query  957  CATGACTGTGACGGTGAAGAAGACTGTCCCCTCTCCTGAGGCTGTGCAGATCCTCTACCAGCGGATGAGATACG  1030
                                                                                      
Sbjct  673  --------------------------------------------------------------------------  672

Query 1031  AGTACGAGTTTTACCACTACGTCAAAGAGCAGTTCCACCTGCTGAAGCGCAAGTTTGGACTTAAGTCTCACGTC  1104
                                                                                      
Sbjct  673  --------------------------------------------------------------------------  672

Query 1105  AGCAAGCCCCCCCTGAGGCCACACTTCTTTATCCCAACTCCACTGGAAACCGAGGAGCCAATCGACGATGAAGA  1178
                                                                                      
Sbjct  673  --------------------------------------------------------------------------  672

Query 1179  ACAGGATGATGAAAAGTGGCTGGAAGATATTTATAAGAGG  1218
                                                    
Sbjct  673  ----------------------------------------  672