Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_02424
- Subject:
- XM_011239219.2
- Aligned Length:
- 1234
- Identities:
- 775
- Gaps:
- 332
Alignment
Query 1 ATGTTCGTGCAGGAGGAGAAGATCTTCGCGGGCAAGGTGCTGCGGCTGCACATCTGCGCGTCCGACGGCGCCGA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GTGGCTGGAGGAGGCCACCGAGGACACCTCGGTGGAGAAGCTCAAGGAGCGCTGCCTCAAGCACTGTGCTCATG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 GGAGCTTAGAAGATCCCAAAAGTATAACCCATCATAAATTAATCCACGCTGCCTCAGAGAGGGTGCTGAGTGAT 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GCCAGGACCATCCTGGAAGAGAACATCCAGGACCAAGATGTCCTATTATTGATAAAAAAGCGTGCTCCATCACC 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 ACTTCCCAAGATGGCTGATGTCTCAGCAGAAGAAAAGAAAAAACAAGACCAGAAAGCTCCAGATAAAGAGGCCA 370
||||||||.||||||||||||||||||||.||||||||.||.||.||||||||.|||||.||.|
Sbjct 1 ----------ATGGCTGACGTCTCAGCAGAAGAAAAGAAGAAACAAGAGCAAAAGGCTCCAGACAAAGATGCTA 64
Query 371 TACTGCGGGCCACCGCCAACCTGCCCTCCTACAACATGGACCGGGCCGCGGTCCAGACCAACATGAGAGACTTC 444
|.||.||.||.||.||.||||||||..|||.||.||..||||||.|.||.||||||||||.|||||||||||||
Sbjct 65 TTCTTCGAGCAACGGCAAACCTGCCTGCCTGCAGCACTGACCGGACTGCTGTCCAGACCACCATGAGAGACTTC 138
Query 445 CAGACAGAACTCCGGAAGATACTGGTGTCTCTCATCGAGGTGGCGCAGAAGCTGTTAGCGCTGAACCCAGATGC 518
||||||||||||||||||||.||.|||||||||||.||||||||.||||||||||||||.|||||.||.|||||
Sbjct 139 CAGACAGAACTCCGGAAGATCCTCGTGTCTCTCATTGAGGTGGCACAGAAGCTGTTAGCACTGAATCCCGATGC 212
Query 519 GGTGGAATTGTTTAAGAAGGCGAATGCAATGCTGGACGAGGACGAGGATGAGCGTGTGGACGAGGCTGCCCTGC 592
.||.|||||||||||||||||.|||||.||||||||.||.||.|||||||||||.|||||.|||.|||||.|||
Sbjct 213 AGTTGAATTGTTTAAGAAGGCAAATGCTATGCTGGATGAAGATGAGGATGAGCGAGTGGATGAGACTGCCTTGC 286
Query 593 GGCAGCTCACGGAGATGGGCTTTCCGGAGAACAGAGCCACCAAGGCCCTTCAGCTGAACCACATGTCGGTGCCT 666
||||||||||.||||||||||||||.||||.|||||||.|.||||||||||.|||||||||||||||.||||||
Sbjct 287 GGCAGCTCACAGAGATGGGCTTTCCTGAGAGCAGAGCCTCAAAGGCCCTTCGGCTGAACCACATGTCAGTGCCT 360
Query 667 CAGGCCATGGAGTGGCTAATTGAACACGCAGAAGACCCGACCATAGACACGCCTCTTCCTGGCCAAGCTCCCCC 740
|||||||||||||||||||||||||||.|||||||.||..|.||.|||||.||||||||.|||||.|||.|.|.
Sbjct 361 CAGGCCATGGAGTGGCTAATTGAACACTCAGAAGATCCAGCTATTGACACACCTCTTCCAGGCCATGCTGCTCA 434
Query 741 AG-AGGCCGAGGGGGCCA------CAGCAGCTGCCTCC------------GAGGCTGCCGCGGGAGCCAGCGCC 795
|| | ||||||| ||||..||.||||| ||.|||||.|.||||.|.||.|..
Sbjct 435 AGCA-------GGGGCCAGTGCTGCAGCCACTACCTCCTCCACCTCCTCTGAAGCTGCTGTGGGAACTAGTGTT 501
Query 796 ACCGATGAGGAGGCCAGAGATGAGCTGACGGAAATCTTCAAGAAGATCCGGAGGAAAAGGGAGTTTCGGGCTGA 869
...|||||||||.||.|.||||||||.||.|||||||||||||||||.||.|||||||.|||.|||||.||.||
Sbjct 502 GAAGATGAGGAGTCCCGGGATGAGCTCACAGAAATCTTCAAGAAGATACGCAGGAAAAAGGAATTTCGAGCAGA 575
Query 870 TGCTCGGGCCGTCATTTCCCTGATGGAGATGGGGTTCGACGAGAAAGAGGTGATAGATGCCCTCAGAGTGAACA 943
|||||||||.||||||||.||||||||||||||.||.||||||||.||.|||||.|||||||||.|||||||||
Sbjct 576 TGCTCGGGCTGTCATTTCGCTGATGGAGATGGGCTTTGACGAGAAGGAAGTGATTGATGCCCTCCGAGTGAACA 649
Query 944 ACAACCAGCAGAATGCCGCGTGCGAGTGGCTGCTGGGGGACCGGAAGCCCTCTCCGGAGGAGCTGGACAAGGGC 1017
|||||||||||||.||.||.||.||.|||||||||||||||||||||||.||.||.|||||..|||||.|||||
Sbjct 650 ACAACCAGCAGAACGCTGCTTGTGAATGGCTGCTGGGGGACCGGAAGCCATCCCCTGAGGAATTGGACCAGGGC 723
Query 1018 ATCGACCCCGACAGTCCTCTCTTTCAGGCCATCCTGGATAACCCGGTGGTGCAGCTGGGCCTGACCAACCCGAA 1091
|||||.|||.|.||.|||||||||||||||||||||||.|||||.||||||||||||||..||||.|||||.||
Sbjct 724 ATCGATCCCAATAGCCCTCTCTTTCAGGCCATCCTGGACAACCCAGTGGTGCAGCTGGGTTTGACAAACCCTAA 797
Query 1092 AACATTGCTAGCATTTGAAGACATGCTGGAGAACCCACTGAACAGCACCCAGTGGATGAATGATCCAGAAACGG 1165
.||||||||||||||||||||||||||||||||.||.||.||||||||||||||||||||.||.|||||.||||
Sbjct 798 GACATTGCTAGCATTTGAAGACATGCTGGAGAATCCGCTTAACAGCACCCAGTGGATGAACGACCCAGAGACGG 871
Query 1166 GGCCTGTCATGCTGCAGATCTCTAGAATCTTCCAGACACTAAATCGCACG 1215
|.||.||||||||||||||||||||.|||||||||||.||.|||||||||
Sbjct 872 GCCCGGTCATGCTGCAGATCTCTAGGATCTTCCAGACGCTGAATCGCACG 921