Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_02510
- Subject:
- NR_134881.1
- Aligned Length:
- 3039
- Identities:
- 834
- Gaps:
- 2205
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TTTTGAGATGGAGTCTTGCCCTGTCGCCCAGGCTGGAGTGCAATGGCGTGATCTCGGCTCACTGCAACCTCCAT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTCCCAGGTTCAAGCAATTCTCCTGCCTCCACCTCCCGAGTAGCTGGGATTACAGGCGTGTGCCACCACGCCCG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCTAACTTTTTGTATCTTTAGTAGAGATGGGGTTTCAGCATCTTGGCCAGGCTGGTCTTGAACTCCTGACCTCG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGATCCACCTACCTCGGCCTTCCAAAGTGCTGGAATTATAGGCGTGAGCCACCAAGCCCGGCCTCCTCTTTATT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TTTTATTTTGATTTATTTATTTTTGAGATGGGGGGGGTGTCTCGCTATGTTGACCAGGCTGGTCTCGAACTCCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GGCCTCAAGCAGTTCTCCCTTCTTGGCCTCCCAAAGTGCTGGGATTACAGACATTAGCCACGGCGCCTGGCCTT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TTTCTTCTTCTTCTTCTTTGTTGAGACAGGGTCTCAATCTGTTGCCCAGGCTGGTCTCCAACTCCTGGGCTCAG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GTGATCCTTCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCATTAAGTGTTCCCCTTAATGACA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CAGCAGATGAGAGTTTTACTGAGTATCTCCTTGTGCCAGGCACCCTGTTGTTGCTGGGGAAGCGGAAGGGAGAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ACAATCGTTAATCGGCTAAATTTCTGCCTTCTGAGAGCTCAGAATCAAGAAATAAATAATAGGGCAGTAAAAGG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGCTGGGATTACATACAAAAAGAAAATTAATGCCTGAACTTTTTACAATCTGCTCGATAAGCTTTAATTCTATT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AACCTATTTGAGCTTCCCAACAACAGGCAAGCTCCCACAGCAGCTAGGAGGATCACTTTGTCGTCATACAAATA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GAAACAGGCTCAGAGAGGAAGTCATTTGTTCTAGTTCTCACTAGGACAAATCTACTGGCTACTAAAAAAGTGTG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AAGGCTGGGGACAGTTTGAGTCGTCCTGCTTGCACCTTAAGCGCCTACAAGAGTGCCCGGCTATAACAACCACA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ATACCAATAATAAAATTTAAAAACAGATGTTCAGTAAGGACTTGCGGCATTAGGACCCCAGGAGGGAAGTGACG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TTCGAGGAGGCGGAGAAAGCCGCGAAGACGGCCTTCCCCACATCTTCCAGCACCTGCGCGCCTGAATCCGTCCC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ACCCAGGCCCAGACGCAGGCTTCTTCTCGGGTCTTGGTCCTGCATCCTCTCTCTCCCAGAGCCTCCGTTAGGGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GTGGGAAAGGACTTTGCCATAGGTCGCTGAGGCCACCATCTGCTCTCTTACTGGCCAAGGGCGTAAAAAGATAG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TCTTCCCATTAGCTAGAGAGCAAACCCCAGAAAGCCTATTGGCTGCGCCGTCCGCGGGCCTTGGTCCGCTTTGA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AGGCGGGCTGCGGCTGCGAGAGGAGGGCGGGCGGGAGGCTAGCTGTTGTCGTGGTTGCTCGGAGGCACGTGTGC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AGTCCCGGAAGCGGCGAGGGGAAACTGCTCCGCGCGCGCCGCGGGAGGAGGAACCGCCCGGTCCTTTAGGGTCC 1554
Query 1 ---------------ATGGATTCAATGCCTGAGCCCGCGTCCCGCTGTCTTCTGCTTCTTCCCTTGCTGCTGCT 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 GGGCCCGGCCGGGCCATGGATTCAATGCCTGAGCCCGCGTCCCGCTGTCTTCTGCTTCTTCCCTTGCTGCTGCT 1628
Query 60 GCTGCTGCTGCTGCTGCCGGCCCCGGAGCTGGGCCCGAGCCAGGCCGGAGCTGAGGAGAACGACTGGGTTCGCC 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 GCTGCTGCTGCTGCTGCCGGCCCCGGAGCTGGGCCCGAGCCAGGCCGGAGCTGAGGAGAACGACTGGGTTCGCC 1702
Query 134 TGCCCAGCAAATGCGAA--------------------------------------------------------- 150
|||||||||||||||||
Sbjct 1703 TGCCCAGCAAATGCGAAGGCTTGCGCCGGGACGCTGCGGCGGACGAGAGATCTGGTCCCGGTACCCCTGGAGTT 1776
Query 151 --------GTGTGTAAATATGTTGCTGTGGAGCTGAAGTCAGCCTTTGAGGAAACCGGCAAGACCAAGGAGGTG 216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 CACACATTGTGTGTAAATATGTTGCTGTGGAGCTGAAGTCAGCCTTTGAGGAAACCGGCAAGACCAAGGAGGTG 1850
Query 217 ATTGGCACGGGCTATGGCATCCTGGACCAGAAGGCCTCTGGAGTCAAATACACCAAGTC--------------- 275
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 ATTGGCACGGGCTATGGCATCCTGGACCAGAAGGCCTCTGGAGTCAAATACACCAAGTCCATTTCAGATCCCCC 1924
Query 276 -----------------------------------------------GGACTTGCGGTTAATCGAAGTCACTGA 302
|||||||||||||||||||||||||||
Sbjct 1925 AGACCAGATGACCTATCTTCCTTCCAGCTCTGAGTCACTTCCCATTGGGACTTGCGGTTAATCGAAGTCACTGA 1998
Query 303 GACCATTTGCAAGAGGCTCCTGGATTATAGCCTGCACAAGGAGAGGACCGGCAGCAATCGATTTGCCAAGGGCA 376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 GACCATTTGCAAGAGGCTCCTGGATTATAGCCTGCACAAGGAGAGGACCGGCAGCAATCGATTTGCCAAGGGCA 2072
Query 377 TGTCAGAGACCTTTGAGACATTACACAACCTGGTACACAAAGGGGTCAAGGTGGTGATGGACATCCCCTATGAG 450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 TGTCAGAGACCTTTGAGACATTACACAACCTGGTACACAAAGGGGTCAAGGTGGTGATGGACATCCCCTATGAG 2146
Query 451 CTGTGGAACGAGACTTCTGCAGAGGTGGCTGACCTCAAGAAGCAGTGTGATGTGCTGGTGGAAGAGTTTGAGGA 524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 CTGTGGAACGAGACTTCTGCAGAGGTGGCTGACCTCAAGAAGCAGTGTGATGTGCTGGTGGAAGAGTTTGAGGA 2220
Query 525 GGTGATCGAGGACTGGTACAGGAACCACCAGGAGGAAGACCTGACTGAATTCCTCTGCGCCAACCACGTGCTGA 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 GGTGATCGAGGACTGGTACAGGAACCACCAGGAGGAAGACCTGACTGAATTCCTCTGCGCCAACCACGTGCTGA 2294
Query 599 AGGGAAAAGACACCAGTTGCCTGGCAGAGCAGTGGTCCGGCAAGAAGGGAGACACAGCTGCCCTGGGAGGGAAG 672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 AGGGAAAAGACACCAGTTGCCTGGCAGAGCAGTGGTCCGGCAAGAAGGGAGACACAGCTGCCCTGGGAGGGAAG 2368
Query 673 AAGTCCAAGAAGAAGAGCAGCAGGGCCAAGGCAGCAGGCGGCAGGAGTAGCAGCAGCAAACAAAGGAAGGAGCT 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 AAGTCCAAGAAGAAGAGCAGCAGGGCCAAGGCAGCAGGCGGCAGGAGTAGCAGCAGCAAACAAAGGAAGGAGCT 2442
Query 747 GGGTGGCCTTGAGGGAGACCCCAGCCCCGAGGAGGATGAGGGCATCCAGAAGGCATCCCCTCTCACACACAGCC 820
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 GGGTGGCCTTGAGGGAGACCCCAGCCCCGAGGAGGATGAGGGCATCCAGAAGGCATCCCCTCTCACACACAGCC 2516
Query 821 CCCCTGATGAGCTC------------------------------------------------------------ 834
||||||||||||||
Sbjct 2517 CCCCTGATGAGCTCTGAGCCCACCCAGCATCCTCTGTCCTGAGACCCCTGATTTTGAAGCTGAGGAGTCAGGGG 2590
Query 835 -------------------------------------------------------------------------- 834
Sbjct 2591 CATGGCTCTGGCAGGCCGGGATGGCCCCGCAGCCTTCAGCCCCTCCTTGCCTTGGCTGTGCCCTCTTCTGCCAA 2664
Query 835 -------------------------------------------------------------------------- 834
Sbjct 2665 GGAAAGACACAAGCCCCAGGAAGAACTCAGAGCCGTCATGGGTAGCCCACGCCGTCCTTTCCCCTCCCCAAGTG 2738
Query 835 -------------------------------------------------------------------------- 834
Sbjct 2739 TTTCTCTCCTGACCCAGGGTTCAGGCAGGCCTTGTGGTTTCAGGACTGCAAGGACTCCAGTGTGAACTCAGGAG 2812
Query 835 -------------------------------------------------------------------------- 834
Sbjct 2813 GGGCAGGTGTCAGAACTGGGCACCAGGACTGGAGCCCCCTCCGGAGACCAAACTCACCATCCCTCAGTCCTCCC 2886
Query 835 -------------------------------------------------------------------------- 834
Sbjct 2887 CAACAGGGTACTAGGACTGCAGCCCCCTGTAGCTCCTCTCTGCTTACCCCTCCTGTGGACACCTTGCACTCTGC 2960
Query 835 -------------------------------------------------------------------------- 834
Sbjct 2961 CTGGCCCTTCCCAGAGCCCAAAGAGTAAAAATGTTCTGGTTCTGATTTCTGAGTCCTCTGCAGCCCTCAAAAAA 3034
Query 835 ----- 834
Sbjct 3035 AAAAA 3039
