Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_02599
- Subject:
- XM_017026184.2
- Aligned Length:
- 2029
- Identities:
- 1285
- Gaps:
- 611
Alignment
Query 1 ATGACCCCCATCGTCACAGTCCTGATCTGTCTCAGGCTGAGTCTGGGCCCCCGGACCCACGTGCAGGCAGGGAC 74
||||||||||||.||||.|||||||||||||||.||||||||||||||||||||||||||||||||||||||..
Sbjct 1 ATGACCCCCATCCTCACGGTCCTGATCTGTCTCGGGCTGAGTCTGGGCCCCCGGACCCACGTGCAGGCAGGGCA 74
Query 75 CCTCCCCAAGCCCACACTCTGGGCTGAGCCAGGCTCTGTGATCACCCAGGGGAGTCCCGTGACCCTCTGGTGTC 148
|||||||||||||||.|||||||||||.|||||||||||||||||||||||||||||.|||||||||.||||||
Sbjct 75 CCTCCCCAAGCCCACCCTCTGGGCTGAACCAGGCTCTGTGATCACCCAGGGGAGTCCTGTGACCCTCAGGTGTC 148
Query 149 AGGGGATCCTGGAGACCCAGGAGTACCGTCTGTATAGAGAAAAGAAAACAGCACCCTGGATTACACGGATCCCA 222
|||||..||.|||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 AGGGGGGCCAGGAGACCCAGGAGTACCGTCTATATAGAGAAAAGAAAACAGCACCCTGGATTACACGGATCCCA 222
Query 223 CAGGAGATTGTGAAGAAGGGCCAGTTCCCCATCCCATCCATCACCTGGGAACACACAGGGCGGTATCGCTGTTT 296
||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.
Sbjct 223 CAGGAGCTTGTGAAGAAGGGCCAGTTCCCCATCCCATCCATCACCTGGGAACACACAGGGCGGTATCGCTGTTA 296
Query 297 CTACGGTAGCCACACTGCAGGCTGGTCAGAGCCCAGTGACCCCCTGGAGCTGGTGGTGACAGGAGCCTACATCA 370
|||.||||||.|||||||||||.|.||||||..|||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CTATGGTAGCGACACTGCAGGCCGCTCAGAGAGCAGTGACCCCCTGGAGCTGGTGGTGACAGGAGCCTACATCA 370
Query 371 AACCCACCCTCTCAGCTCTACCCAGCCCTGTGGTGACCTCAGGAGGGAACGTGACCCTCCATTGTGTCTCACAG 444
||||||||||||||||.|..||||||||.|||||||.||||||||||||.||.||||||||.||||.|||||||
Sbjct 371 AACCCACCCTCTCAGCCCAGCCCAGCCCCGTGGTGAACTCAGGAGGGAATGTAACCCTCCAGTGTGACTCACAG 444
Query 445 GTGGCATTTGGCAGCTTCATTCTGTGTAAGGAAGGAGAAGATGAACACCCACAATGCCTGAACTCACAGCCCCG 518
||||||||||...||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||.
Sbjct 445 GTGGCATTTGATGGCTTCATTCTGTGTAAGGAAGGAGAAGATGAACACCCACAATGCCTGAACTCCCAGCCCCA 518
Query 519 TACCCATGGGTGGTCCCGGGCCATCTTCTCTGTGGGCCCCGTGAGCCCGAGTCGCAGGTGGTCGTACAGGTGCT 592
|.|||.|||||.||||||.|||||||||||.|||||||||||||||||||||||||||||||.|||||||||||
Sbjct 519 TGCCCGTGGGTCGTCCCGCGCCATCTTCTCCGTGGGCCCCGTGAGCCCGAGTCGCAGGTGGTGGTACAGGTGCT 592
Query 593 ATGCTTATGACTCGAACTCTCCCCATGTGTGGTCTCTACCCAGTGATCTCCTGGAGCTCCTGGTCCTAGGTGTT 666
|||||||||||||||||||||||.|||.||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 ATGCTTATGACTCGAACTCTCCCTATGAGTGGTCTCTACCCAGTGATCTCCTGGAGCTCCTGGTCCTAGGTGTT 666
Query 667 TCTAAGAAGCCATCACTCTCAGTGCAGCCAGGTCCTATAGTGGCCCCTGGGGAGAGCCTGACCCTCCAGTGTGT 740
||||||||||||||||||||||||||||||||||||||.||||||||||.|||||.||||||.||.|||||||.
Sbjct 667 TCTAAGAAGCCATCACTCTCAGTGCAGCCAGGTCCTATCGTGGCCCCTGAGGAGACCCTGACTCTGCAGTGTGG 740
Query 741 TTCTGATGTCAGCTACGACAGATTTGTTCTGTATAAGGAGGGAGAACGTGACTTCCTCCAGCTCCCTGGCCCAC 814
.|||||||...|||||.||||||||||||||||||||||.||.||||||||||||||.||||||.|||||.|||
Sbjct 741 CTCTGATGCTGGCTACAACAGATTTGTTCTGTATAAGGACGGGGAACGTGACTTCCTTCAGCTCGCTGGCGCAC 814
Query 815 AGCCCCAGGCTGGGCTCTCCCAGGCCAACTTCACCCTGGGCCCTGTGAGCCGCTCCTACGGGGGCCAGTACAGA 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AGCCCCAGGCTGGGCTCTCCCAGGCCAACTTCACCCTGGGCCCTGTGAGCCGCTCCTACGGGGGCCAGTACAGA 888
Query 889 TGCTCCGGTGCATACAACCTCTCCTCCGAGTGGTCGGCCCCCAGCGACCCCCTGGACATCCTGATCGCAGGACA 962
||||.|||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||..|
Sbjct 889 TGCTACGGTGCACACAACCTCTCCTCCGAGTGGTCGGCCCCCAGCGACCCCCTGGACATCCTGATCGCAGGTGA 962
Query 963 ------------GTTCCGT--GG---------------CAGACCCTTCATCTCGGTG-----CATCCGGGCCCC 1002
||||.|| || |||.||||.| |||.| ||.|||||||||
Sbjct 963 GGAGCCCAGCGGGTTCAGTCAGGGACCCAGGCTCCGCACAGGCCCTGC----CGGGGGAGCTCAGCCGGGCCCC 1032
Query 1003 ACGGTGGCCTCAGGAGAGAACGTGACCCTGCTGTGTCAGTCATGGGGGCCGTTCCACACTTTCCTTCTGACCAA 1076
||||||||||||||||||||||||||||||||||||||||||..|||...|.|.||.|||||||||||||||||
Sbjct 1033 ACGGTGGCCTCAGGAGAGAACGTGACCCTGCTGTGTCAGTCACAGGGATGGATGCAAACTTTCCTTCTGACCAA 1106
Query 1077 GGCGGGAGCAGCTGATGCCCCCCTCCGTCTCAGATCAATACACGAATATCCTAAGTACCAGGCTGAATTCCCTA 1150
||.|||.||||||||||.|||....|||||.|||||||...||.|||.||..||.|||||||||||||||||.|
Sbjct 1107 GGAGGGGGCAGCTGATGACCCATGGCGTCTAAGATCAACGTACCAATCTCAAAAATACCAGGCTGAATTCCCCA 1180
Query 1151 TGAGTCCTGTGACCTCAGCCCACTCGGGGACCTACAGGTGCTACGGCTCACTCAGCTCCAACCCCTACCTGCTG 1224
||.|||||||||||||||||||..|||||||||||||||||||||||||||..||||||||.||||||||||||
Sbjct 1181 TGGGTCCTGTGACCTCAGCCCATGCGGGGACCTACAGGTGCTACGGCTCACAGAGCTCCAAACCCTACCTGCTG 1254
Query 1225 TCTCACCCCAGTGACTCCCTGGAGCTCATGGTCTCAGGAGCAGCTGAGACCCTCAGC-CCACCACAAAACAAGT 1297
.||||||||||||||.|||||||||||.|||||||||||.|..|||.|..||.|||| ||.|.|| ||||.|.
Sbjct 1255 ACTCACCCCAGTGACCCCCTGGAGCTCGTGGTCTCAGGACCGTCTGGGGGCCCCAGCTCCCCGAC--AACAGGC 1326
Query 1298 CCGA-TTCCAAGGCTGGAGCAGCTAACACCCT------CAGCCCATCACAAAACAAGACTGCCTCAC------- 1357
||.| .||||...|||| |||| ||||||.|||| ||.|||
Sbjct 1327 CCCACCTCCACATCTGG-----------CCCTGAGGACCAGCCCCTCAC------------CCCCACCGGGTCG 1377
Query 1358 -ACCCCCAGGATTACACAGTGGAGAATCT-------CATCCG--------CATGGGCATAGCTGGCTTGG---- 1411
|.|||||| ||||| ||| ||.|.| .||.||||| |||||
Sbjct 1378 GATCCCCAG--------AGTGG----TCTGGGAAGGCACCTGGGGGTTGTGATCGGCAT------CTTGGTGGC 1433
Query 1412 -----TCCTGGTGGTCCTC-----------------------------------------GGG---ATTCT--- 1433
||||..||.||||| ||| |..||
Sbjct 1434 CGTCATCCTACTGCTCCTCCTCCTCCTCCTCCTCTTCCTCATCCTCCGACATCGACGTCAGGGCAAACACTGGA 1507
Query 1434 -----------------GCT-ATTT-------------GAGGCT-------CAG----CACAGCCAGAGAAGCC 1465
||| |||| |.|||| ||| |||||.||||| |||
Sbjct 1508 CATCGACCCAGAGAAAGGCTGATTTCCAACATCCTGCAGGGGCTGTGGGGCCAGAGCCCACAGACAGAG--GCC 1579
Query 1466 TC------------------------------------------------------------------------ 1467
|.
Sbjct 1580 TGCAGTGGAGGTCCAGCCCAGCTGCCGATGCCCAGGAAGAAAACCTCTATGCTGCCGTGAAGCACACACAGCCT 1653
Query 1468 -------------------------------------------------------------------------- 1467
Sbjct 1654 GAGGATGGGGTGGAGATGGACACTCGGAGCCCACACGATGAAGACCCCCAGGCAGTGACGTATGCCGAGGTGAA 1727
Query 1468 -------------------------------------------------------------------------- 1467
Sbjct 1728 ACACTCCAGACCTAGGAGAGAAATGGCCTCTCCTCCTTCCCCACTGTCTGGGGAATTCCTGGACACAAAGGACA 1801
Query 1468 -------------------------------------------------------------------------- 1467
Sbjct 1802 GACAGGCGGAAGAGGACAGGCAGATGGACACTGAGGCTGCTGCATCTGAAGCCCCCCAGGATGTGACCTACGCC 1875
Query 1468 -------------------------------------------------------------------------- 1467
Sbjct 1876 CAGCTGCACAGCTTGACCCTCAGACGGGAGGCAACTGAGCCTCCTCCATCCCAGGAAGGGCCCTCTCCAGCTGT 1949
Query 1468 ------------------------------- 1467
Sbjct 1950 GCCCAGCATCTACGCCACTCTGGCCATCCAC 1980
