Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_02660
- Subject:
- XR_002956748.1
- Aligned Length:
- 3941
- Identities:
- 452
- Gaps:
- 3445
Alignment
Query 1 ------------------------------------------------------ATGGCGGGTCTGACTGACTT 20
||||||||||||||||||||
Sbjct 1 GACTGACGTCCCGCCCTCTGGCTGTTTCCTGGCCGAGGTGGGTCGGTAGTAGCGATGGCGGGTCTGACTGACTT 74
Query 21 GCAGCGGCTACAGGCCCGAGTGGAAGAGCTGGAGCGCTGGGTGTACGGGCCGGGCGGGGCGCGCGGCTCACGGA 94
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GCAGCGGCTACAGGCCCGAGTGGAAGAGCTGGAGCGCTGGGTGTACGGGCCGGGCGGGGCGCGCGGCTCACGGA 148
Query 95 AGGTGGCTGACGGCCTGGTCAAGGTGCAGGTGGCTTTGGGGAACATTTCCAGCAAGAGGGAGAGGGTGAAGATT 168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 AGGTGGCTGACGGCCTGGTCAAGGTGCAGGTGGCTTTGGGGAACATTTCCAGCAAGAGGGAGAGGGTGAAGATT 222
Query 169 CTCTACAAAAAGATTGAAGATCTGATCAAGTACCTGGATCCTGAGTACATCGACCGCATTGCCATACCTGATGC 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CTCTACAAAAAGATTGAAGATCTGATCAAGTACCTGGATCCTGAGTACATCGACCGCATTGCCATACCTGATGC 296
Query 243 CTCTAAGCTGCAATTCATCCTAGCAGAGGAGCAGTTTATCCTTTCC--CAGGT-----TGCA-CTCCTGGAGCA 308
||||||||||||||||||||| |||||.|.||.||...| ||.|| |||| || |||.|
Sbjct 297 CTCTAAGCTGCAATTCATCCT--------AGCAGGTAATGCTGGACTACATGTGTACATGCATCT----GAGGA 358
Query 309 GGTGAATGCCTTGGTGCCCATGCT--GGACAGTG-------CTCACATCAAAGCCGT-TCCTG---------AG 363
.|||..| |.|.||.| |.|.| |.||||.| ||| |||| |.|| |.||| ||
Sbjct 359 TGTGGGT-CGTCGGGG---AGGTTAAGCACAGAGATGGCCTCTC-CATC----CAGTCTTCTGGTGGATACAAG 423
Query 364 C-----ATGCTGCCC------------GCCTGCAGCGCTTGG--------CCCA--GATCC--------ACATT 402
| |||||||.| ||||| |..||.|| ||.| ||||| |||||
Sbjct 424 CCCTGGATGCTGCTCTCTGGAATTGTGGCCTG--GTTCTGGGTTGAGGATCCTATGGATCCTCTAGTAGACATT 495
Query 403 ---------------------CAGCAGCAGGCTCCATGGGG--------AGTGGG----AGTCC-GTGAT---- 438
||||.||||| ||||||.| |||||| ||||| |||.|
Sbjct 496 GAGTACAGTATACCTCTGCACCAGCTGCAGG--CCATGGTGCCAGCCACAGTGGGAGCTAGTCCAGTGTTCTAT 567
Query 439 ----------------------------------------------------------GAGG------CAGG-A 447
|||| .||| |
Sbjct 568 CAATAGTTTGCCTCTTGGATTTTCCTTCAGAACCTTCCTCACTTCTGCTCACTAGACAGAGGAGCTTCTAGGAA 641
Query 448 AGTTTAGTGGAAGATGTGGGCTTTGCC---------CAG----------------------------TTCCTTT 484
||..|||.||.||| |.||.||||| ||| ||.||||
Sbjct 642 AGGGTAGGGGCAGA---GAGCATTGCCATTAAAGAACAGAGAGAGTATTGGCATGAGTTTCAACATCTTTCTTT 712
Query 485 C-TGTG--------CTACACT-------TTGGCCCTA--CAGGA------------CCAGTGTGTGGAAATCAC 528
| |||| ||.||.| || ||| ||||| .||.|||.||..|||||.
Sbjct 713 CATGTGAGAAAGCTCTGCAGTGTCAGAGTT----CTAGGCAGGAACTATTGCCTTGGCAATGTCTGCTAATCAG 782
Query 529 -------------------------------------------------------------------------- 528
Sbjct 783 TCAGCCATTCTATAAGCTAGGGTTTTTTGAGCTTCGTTATTCATCCAAAAGATGTATAATGATCATCTACTCTG 856
Query 529 -------------------------------------------------------------------------- 528
Sbjct 857 ATCCAGGTTCTTTCCTAAGTGAGGAAGCATACAGTGGTGAACCAGAAAGTCCCTGCCCTCATGGGCACAGCCAG 930
Query 529 -------------------------------------------------------------------------- 528
Sbjct 931 AGCTAGGGGAGACAGGGTCCCTGCTTCAGGGACCTGAGCTTATAACCCAGATGGGAGATCAGTCTCCCAGGAGA 1004
Query 529 -------------------------------------------------------------------------- 528
Sbjct 1005 CTGATCAGTGCAATGCAGCACTGAGGACTGGGTAAGGATGGGCCACTCCTGCTAAAAGGGCTGTCAGAGTTCCC 1078
Query 529 -------------------------------------------------------------------------- 528
Sbjct 1079 AAAGGGCTCTTGGTCAATTGCCATCGCTCAAGCACCAAGTTTAGATATTCTCCTGCACTGACTCTTGAGTCCAG 1152
Query 529 -------------------------------------------------------------------------- 528
Sbjct 1153 CCTCTCCATCCCTCCCTGTGGCACTGCCTCAGGAATTGTGCATCCACTTGCATATGAATGGTTGCACAGTCTCC 1226
Query 529 -------------------------------------------------------------------------- 528
Sbjct 1227 TAAATCATACTCTTGACCCTAATCTTTCCCTTCCTGCATGTGGTTCAGTCTCACCCTCACAAAAACATGTTCCC 1300
Query 529 -------------------------------------------------------------------------- 528
Sbjct 1301 AACATGTCACTTTGCCTACTTTGGAACCTCAGTGTATCCTGCCTTGCTAGGATAAAGTCCTAATTCCATAGTCT 1374
Query 529 -------------------------------------------------------------------------- 528
Sbjct 1375 GCCATTCAAAGCCTTTCAGTCGGCCGGGTCTACCCTCCCATCCAACTCTGTTTCCTGTGCTCTCCCTACTCCAG 1448
Query 529 -------------------------------------------------------------------------- 528
Sbjct 1449 TTCAGCTAATTGAATTCTTTCTCCTCTACTAATTGACAGGCATTCCTGCCTCTAAGCATTTGCACGTAACAGTC 1522
Query 529 -------------------------------------------------------------------------- 528
Sbjct 1523 CTCTCTCTTGAATACCCTTCCCACTCTATGGATTTCAGTGCATTGAAATCCCGTGTGCATACAGGGCCTAGCCC 1596
Query 529 -------------------------------------------------------------------------- 528
Sbjct 1597 AGATCCTGCTCTCCTCACTGGACTCTTCCATTACTGTCCCAGCTCTCCTCCAGCATATAATTGTCTATGCCTCT 1670
Query 529 -------------------------------------------------------------------------- 528
Sbjct 1671 GAGAGCCACTGAGCAGAACCTGCCTGGCGTAGTCTGCCACATATCTCTTTTAGACCTTCCTGGGGACCCTTGGG 1744
Query 529 -------------------------------------------------------------------------- 528
Sbjct 1745 TGTGGGGATCCAAGTCTGAAGTATTTTGTATTTTGTGGCCTAGGAGGTGCTCCCTGAGTTTGTTGATAGGAGGC 1818
Query 529 -------------------------------------------------------------------------- 528
Sbjct 1819 TAGAAGAAGAGGTCTTGAAGTTAAACCTTGGAGAAAGGTGGGATTTGGAGAAATTGAGAGGCTCATTAGGCTCA 1892
Query 529 -------------------------------------------------------------------------- 528
Sbjct 1893 GATGGGTCAGACCTGAGGCATCCAGGAGAGTTGGGGGCAGGATGGAAATGTGCACCTAGAGAAGGGGGCAGTGG 1966
Query 529 -------------------------------------------------------------------------- 528
Sbjct 1967 ACAGAGTCACTGTCCAAAGCTCTAGGACCTAGCCATCTCCCTTGCCAGGTCCTCAGGCCCTTACATGGGCTGAT 2040
Query 529 -------------------------------------------------------------------------- 528
Sbjct 2041 TAGCAATGCCCAGGTTTGCTTCACTGCAACTATCTTGTCCATTTTTGCTTTAGAGGAGCAGTTTATCCTTTCCC 2114
Query 529 -------------------------------------------------------------------------- 528
Sbjct 2115 AGGTTGCACTCCTGGAGCAGGTGAATGCCTTGGTGCCCATGCTGGACAGTGCTCACATCAAAGGTATCTCTCTG 2188
Query 529 -------------------------------------------------------------------------- 528
Sbjct 2189 GGGTTATAGCTTCACTACTCTGGTTGGGGAGGTAGGTGGATGGATGGGCAAGACTTTCCTGTGTTTCAGGTTGT 2262
Query 529 -------------------------------------------------------------------------- 528
Sbjct 2263 GTGGATTCGGGTTGGGTCTGTTCCTTATCTTTTTTTTTTTTTTTTGGACAGAGTCGTACTCTGTCACCCAGGCT 2336
Query 529 -------------------------------------------------------------------------- 528
Sbjct 2337 GGAGTGCAGTGGCATGATCTTGACTCACTGCAACCGCTGCCTCCTGGTTCAAACAAACTTCCCACCTTGCCTCC 2410
Query 529 -------------------------------------------------------------------------- 528
Sbjct 2411 CAAGTAGCTAGGATTACAGGTGTGTGCCACCACACCTGGCTATTTTTAGTAGAGACGGGGTTTCACCATGTTGT 2484
Query 529 -------------------------------------------------------------------------- 528
Sbjct 2485 CCAGGCTGGTCTCAAACTCCTGGCCCCATGTGATCCACCTGCCTCGGCCTCTCAGAGTGCTGGGATTACAGGCG 2558
Query 529 -------------------------------------------------------------------------- 528
Sbjct 2559 TGAGCTACTGTGCCTGGCCTGTTCCTTATCTTTATCCTCACCCTGAGGTACTTGCCACATCCACCAATTAAAAT 2632
Query 529 -------------------------------------------------------------------------- 528
Sbjct 2633 TACCAGGATAGAGAGCCCAGTTTTAGGACCTCAGGCAATTTGGGCCTGAGAACACTAGCCTAAGCTCTAGCAGT 2706
Query 529 -------------------------------------------------------------------------- 528
Sbjct 2707 CCCCAGCTCTGGGGATTCCTTCTGCCTTCTACCTACCCCCAAGCATCTCTTCTTCAAGGTGCTGCAGAACCCAG 2780
Query 529 -------------------------------------------------------------------------- 528
Sbjct 2781 ATTTTACTATCAGAGTCTCTGCCAGGTCCATGAATGTATGTGAATTCTTTCTGCTGCACTGCTGAGAGCAGTCC 2854
Query 529 -------------------------------------------------------------------------- 528
Sbjct 2855 CTGGGCCTGGACTTTGACAAGCAGATAGTGGCTTTAATTGAATCCAGATATCCATCTTGTCTGTCTGTGGAGGT 2928
Query 529 -------------------------------------------------------------------------- 528
Sbjct 2929 ATTTTTCCCAGCTCCCCCTCCCTACCCCTGATCAGCTGCCCGCTGAGTATCTGACAGCCTTAAGCTTTGAGCCC 3002
Query 529 -------------------------------------------------------------------------- 528
Sbjct 3003 AGCATGGTGGCCAAGCCTTGGCGTGTTGGATTCCAGCTTAGGGACCTGGCATCCATCTTCAGACTCCCTGTTCC 3076
Query 529 -------------------------------------------------------------------------- 528
Sbjct 3077 CTAAGCCAGGCAGACCTGCCCCCGCTGGGCTGAGAGCAAAGGGACAGGTCCTATAATAGCCAAAGCTCTCTTTA 3150
Query 529 -------------------------------------------------------------------------- 528
Sbjct 3151 CCTGGTCCTGCTTATAGCACTGGGGTGGGGGTAGGGAGCAACACTGGGAACCCCAAGGTTTTGTCTTCTCCTCG 3224
Query 529 -------------------------------------------------------------------------- 528
Sbjct 3225 GGACATGTATCTTCCCCTCCCCTATGGGTCCTGGAGTAAGACTGGAGTGGGCAGGGAGCCCCACTGCCACCTCC 3298
Query 529 -------------------------------------------------------------------------- 528
Sbjct 3299 AGCTGCAGCAGTCGATGAAGTCTGGCGTTTGTTTAGCTTCTCCACTCAATACTCTAATCCTGCCAAAGACCTAA 3372
Query 529 -------------------------------------------------------------------------- 528
Sbjct 3373 TAGACTATTGAGCAGTCCCGGGGGAGGGCACAAGCATCATCCAGCAGTGTGTGTTGTGTTTTACAGCCGTTCCT 3446
Query 529 -------------------------------------------------------------------------- 528
Sbjct 3447 GAGCATGCTGCCCGCCTGCAGCGCTTGGCCCAGATCCACATTCAGCAGCAGTTCCTTTCTGTGCTACACTTTGG 3520
Query 529 -------------------------------------------------------------------------- 528
Sbjct 3521 CCCTACAGGACCAGTGTGTGGAAATCACTGAGGAGTCCAAGGCTCTCCTGGAGGAATACAACAAGACTACAATG 3594
Query 529 -------------------------------------------------------------------------- 528
Sbjct 3595 CTTCTCTCCAAGCAATTCGTGCAGTGGGATGAGCTACTTTGCCAGCTAGAGGCCGCCACGCAAGTGAAGCCAGC 3668
Query 529 -------------------------------------------------------------------------- 528
Sbjct 3669 AGAGGAGTGATAGCTGCTCCCCATCCCAAAGTGGGCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAACCTGCC 3742
Query 529 -------------------------------------------------------------------------- 528
Sbjct 3743 TTTGTTACAAGGCAGAGGAAGCTTTGTATTTATTGGCTTCAAGGCCCACCTCTCTGTACTCTGGGCTCTAAAGT 3816
Query 529 -------------------------------------------------------------------------- 528
Sbjct 3817 TGGAGGTCAGGTTACCTGAGGTTTGCAATTTGCAACACCCACCCTCCCCCCAATCAGTGTTCTTATTTCAGTGA 3890
Query 529 ------------------- 528
Sbjct 3891 CAATAAACCATAGAGATGA 3909
